RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 FOXN3O00409 490 aaPredicted RBP23.1■■□□□ 1.29
ABCF3-202ENST00000421340 TMEM240Q5SV17 173 aa23.1■■□□□ 1.29
ABCF3-202ENST00000421340 DCLRE1AQ6PJP8 1040 aa23.1■■□□□ 1.29
ABCF3-202ENST00000421340 ZNF365Q70YC5 407 aa23.1■■□□□ 1.29
ABCF3-202ENST00000421340 FAM71AQ8IYT1 594 aa23.1■■□□□ 1.29
ABCF3-202ENST00000421340 TET1Q8NFU7 2136 aa23.1■■□□□ 1.29
ABCF3-202ENST00000421340 LBHD1Q9BQE6 289 aaPredicted RBP23.1■■□□□ 1.29
ABCF3-202ENST00000421340 GOLGA2P5Q9HBQ8 144 aa23.1■■□□□ 1.29
ABCF3-202ENST00000421340 NR2E3Q9Y5X4 410 aa23.1■■□□□ 1.29
ABCF3-202ENST00000421340 BZW2Q9Y6E2 419 aaKnown RBP23.1■■□□□ 1.29
ABCF3-202ENST00000421340 ALPK3Q96L96 1907 aa23.1■■□□□ 1.29
ABCF3-202ENST00000421340 KPNA7A9QM74 516 aa23.09■■□□□ 1.29
ABCF3-202ENST00000421340 PODXLO00592 558 aa23.09■■□□□ 1.29
ABCF3-202ENST00000421340 PPEF2O14830 753 aa23.09■■□□□ 1.29
ABCF3-202ENST00000421340 NRDCO43847 1150 aa23.09■■□□□ 1.29
ABCF3-202ENST00000421340 FERP16591 822 aa23.09■■□□□ 1.29
ABCF3-202ENST00000421340 ASPAP45381 313 aa23.09■■□□□ 1.29
ABCF3-202ENST00000421340 KCNJ6P48051 423 aa23.09■■□□□ 1.29
ABCF3-202ENST00000421340 LILRA4P59901 499 aa23.09■■□□□ 1.29
ABCF3-202ENST00000421340 TNNC1P63316 161 aa23.09■■□□□ 1.29
ABCF3-202ENST00000421340 GOLGA8FQ08AF8 430 aa23.09■■□□□ 1.29
ABCF3-202ENST00000421340 GOLGA8DPQ0D2H9 430 aa23.09■■□□□ 1.29
ABCF3-202ENST00000421340 ARHGAP44Q17R89 818 aa23.09■■□□□ 1.29
ABCF3-202ENST00000421340 DPH6Q7L8W6 267 aa23.09■■□□□ 1.29
ABCF3-202ENST00000421340 LIMS2Q7Z4I7 341 aa23.09■■□□□ 1.29
ABCF3-202ENST00000421340 COLGALT2Q8IYK4 626 aa23.09■■□□□ 1.29
ABCF3-202ENST00000421340 UBR7Q8N806 425 aa23.09■■□□□ 1.29
ABCF3-202ENST00000421340 HERVK_113Q902F9 699 aa23.09■■□□□ 1.29
ABCF3-202ENST00000421340 KAT5Q92993 513 aa23.09■■□□□ 1.29
ABCF3-202ENST00000421340 ZNF689Q96CS4 500 aaPredicted RBP23.09■■□□□ 1.29
ABCF3-202ENST00000421340 FAM193BQ96PV7 902 aaPredicted RBP23.09■■□□□ 1.29
ABCF3-202ENST00000421340 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.09■■□□□ 1.29
ABCF3-202ENST00000421340 TTC3P53804 2025 aa23.09■■□□□ 1.29
ABCF3-202ENST00000421340 DDHD2O94830 711 aa23.08■■□□□ 1.29
ABCF3-202ENST00000421340 ACO1P21399 889 aaKnown RBP23.08■■□□□ 1.29
ABCF3-202ENST00000421340 PRKCIP41743 596 aa23.08■■□□□ 1.29
ABCF3-202ENST00000421340 CLCNKBP51801 687 aa23.08■■□□□ 1.29
ABCF3-202ENST00000421340 RNASELQ05823 741 aaKnown RBP23.08■■□□□ 1.29
ABCF3-202ENST00000421340 WDR59Q6PJI9 974 aa23.08■■□□□ 1.29
ABCF3-202ENST00000421340 OTOP2Q7RTS6 562 aa23.08■■□□□ 1.29
ABCF3-202ENST00000421340 IRF2BP2Q7Z5L9 587 aa23.08■■□□□ 1.29
ABCF3-202ENST00000421340 TMTC1Q8IUR5 882 aa23.08■■□□□ 1.29
ABCF3-202ENST00000421340 TMEM130Q8N3G9 435 aa23.08■■□□□ 1.29
ABCF3-202ENST00000421340 BAG1Q99933 345 aaPredicted RBP23.08■■□□□ 1.29
ABCF3-202ENST00000421340 TMEM175Q9BSA9 504 aa23.08■■□□□ 1.29
ABCF3-202ENST00000421340 NXF1Q9UBU9 619 aaKnown RBP23.08■■□□□ 1.29
ABCF3-202ENST00000421340 TBKBP1A7MCY6 615 aa23.07■■□□□ 1.28
ABCF3-202ENST00000421340 TMEM189-UBE2V1I3L0A0 370 aa23.07■■□□□ 1.28
ABCF3-202ENST00000421340 SYN1P17600 705 aa23.07■■□□□ 1.28
ABCF3-202ENST00000421340 AARSP49588 968 aaKnown RBP eCLIP23.07■■□□□ 1.28
ABCF3-202ENST00000421340 CYP26C1Q6V0L0 522 aa23.07■■□□□ 1.28
ABCF3-202ENST00000421340 ZNF280BQ86YH2 543 aa23.07■■□□□ 1.28
ABCF3-202ENST00000421340 LRRC43Q8N309 656 aa23.07■■□□□ 1.28
ABCF3-202ENST00000421340 PHOSPHO2Q8TCD6 241 aa23.07■■□□□ 1.28
ABCF3-202ENST00000421340 ZMYND8Q9ULU4 1186 aaPredicted RBP23.07■■□□□ 1.28
ABCF3-202ENST00000421340 LTBP2Q14767 1821 aa23.07■■□□□ 1.28
ABCF3-202ENST00000421340 PDCD11Q14690 1871 aaKnown RBP23.07■■□□□ 1.28
ABCF3-202ENST00000421340 CARNS1A5YM72 827 aa23.06■■□□□ 1.28
ABCF3-202ENST00000421340 CASTOR2A6NHX0 329 aa23.06■■□□□ 1.28
ABCF3-202ENST00000421340 SPTLC1O15269 473 aa23.06■■□□□ 1.28
ABCF3-202ENST00000421340 TACC1O75410 805 aa23.06■■□□□ 1.28
ABCF3-202ENST00000421340 CLSTN1O94985 981 aa23.06■■□□□ 1.28
ABCF3-202ENST00000421340 SERPING1P05155 500 aa23.06■■□□□ 1.28
ABCF3-202ENST00000421340 EPHB4P54760 987 aa23.06■■□□□ 1.28
ABCF3-202ENST00000421340 BPIFB4P59827 614 aa23.06■■□□□ 1.28
ABCF3-202ENST00000421340 DEFB103AP81534 67 aa23.06■■□□□ 1.28
ABCF3-202ENST00000421340 ASIC2Q16515 512 aa23.06■■□□□ 1.28
ABCF3-202ENST00000421340 TMEM139Q8IV31 216 aa23.06■■□□□ 1.28
ABCF3-202ENST00000421340 TOP6BLQ8N6T0 577 aa23.06■■□□□ 1.28
ABCF3-202ENST00000421340 ELMO3Q96BJ8 720 aa23.06■■□□□ 1.28
ABCF3-202ENST00000421340 TRIM44Q96DX7 344 aaPredicted RBP23.06■■□□□ 1.28
ABCF3-202ENST00000421340 ARID3AQ99856 593 aa23.06■■□□□ 1.28
ABCF3-202ENST00000421340 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.06■■□□□ 1.28
ABCF3-202ENST00000421340 MTIF3Q9H2K0 278 aaKnown RBP23.06■■□□□ 1.28
ABCF3-202ENST00000421340 NRDE2Q9H7Z3 1164 aa23.06■■□□□ 1.28
ABCF3-202ENST00000421340 RC3H2Q9HBD1 1191 aaKnown RBP23.06■■□□□ 1.28
ABCF3-202ENST00000421340 CISHQ9NSE2 258 aa23.06■■□□□ 1.28
ABCF3-202ENST00000421340 POLIQ9UNA4 740 aa23.06■■□□□ 1.28
ABCF3-202ENST00000421340 SNX9Q9Y5X1 595 aa23.06■■□□□ 1.28
ABCF3-202ENST00000421340 UPP2O95045 317 aa23.05■■□□□ 1.28
ABCF3-202ENST00000421340 ALDH2P05091 517 aa23.05■■□□□ 1.28
ABCF3-202ENST00000421340 ANXA13P27216 316 aa23.05■■□□□ 1.28
ABCF3-202ENST00000421340 HGSNATQ68CP4 663 aa23.05■■□□□ 1.28
ABCF3-202ENST00000421340 CMTR2Q8IYT2 770 aaKnown RBP23.05■■□□□ 1.28
ABCF3-202ENST00000421340 SPATA18Q8TC71 538 aa23.05■■□□□ 1.28
ABCF3-202ENST00000421340 MICAL3Q7RTP6 2002 aa23.04■■□□□ 1.28
ABCF3-202ENST00000421340 SSU72P8A0A1W2PR75 194 aa23.04■■□□□ 1.28
ABCF3-202ENST00000421340 ARHGEF37A1IGU5 675 aa23.04■■□□□ 1.28
ABCF3-202ENST00000421340 B3GAT3O94766 335 aa23.04■■□□□ 1.28
ABCF3-202ENST00000421340 GFPT2O94808 682 aa23.04■■□□□ 1.28
ABCF3-202ENST00000421340 WEE2P0C1S8 567 aa23.04■■□□□ 1.28
ABCF3-202ENST00000421340 GATMP50440 423 aa23.04■■□□□ 1.28
ABCF3-202ENST00000421340 CCZ1BP86790 482 aa23.04■■□□□ 1.28
ABCF3-202ENST00000421340 CCZ1P86791 482 aaPredicted RBP23.04■■□□□ 1.28
ABCF3-202ENST00000421340 INCA1Q0VD86 236 aa23.04■■□□□ 1.28
ABCF3-202ENST00000421340 MAPK8IP2Q13387 824 aaPredicted RBP23.04■■□□□ 1.28
ABCF3-202ENST00000421340 E4F1Q66K89 784 aaPredicted RBP23.04■■□□□ 1.28
ABCF3-202ENST00000421340 CD300LGQ6UXG3 332 aa23.04■■□□□ 1.28
ABCF3-202ENST00000421340 MMS19Q96T76 1030 aa23.04■■□□□ 1.28
ABCF3-202ENST00000421340 PAAF1Q9BRP4 392 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms