RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 SMARCAD1Q9H4L7 1026 aa20.16■□□□□ 0.82
CROCCP3-202ENST00000420820 LRRC4CQ9HCJ2 640 aa20.16■□□□□ 0.82
CROCCP3-202ENST00000420820 SLC12A6Q9UHW9 1150 aa20.16■□□□□ 0.82
CROCCP3-202ENST00000420820 TCRBV5S1A1TA0A578 114 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 ECEL1O95672 775 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 LSP1P33241 339 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 NF2P35240 595 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 SGSM1Q2NKQ1 1148 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 SGO2Q562F6 1265 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 MMS22LQ6ZRQ5 1243 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 KATNAL2Q8IYT4 538 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 SHCBP1Q8NEM2 672 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 BCAS4Q8TDM0 211 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 RNF25Q96BH1 459 aaPredicted RBP20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 OPTNQ96CV9 577 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 NIF3L1Q9GZT8 377 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 RSPH14Q9UHP6 348 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 HBP1O60381 514 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 B4GALT4O60513 344 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 LSM8O95777 96 aaKnown RBP20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 TAS2R40P59535 323 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 GUCY1A3Q02108 690 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 ZNF568Q3ZCX4 644 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 TMEM63BQ5T3F8 832 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 C9orf131Q5VYM1 1079 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 SYDE1Q6ZW31 735 aaPredicted RBP20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 ZC3H15Q8WU90 426 aaKnown RBP20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 C1orf54Q8WWF1 131 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 COPS5Q92905 334 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 TLCD1Q96CP7 247 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 NFKBIZQ9BYH8 718 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 XYLT2Q9H1B5 865 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 PARVAQ9NVD7 372 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 MTRF1LQ9UGC7 380 aaKnown RBP20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 EVPLQ92817 2033 aa20.15■□□□□ 0.82
CROCCP3-202ENST00000420820 CDH5P33151 784 aaPredicted RBP20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 RHPN2Q8IUC4 686 aa20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 RHOT1Q8IXI2 618 aa20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 FEZF2Q8TBJ5 459 aa20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 DCLK3Q9C098 648 aa20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 CHST7Q9NS84 486 aa20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 WHRNQ9P202 907 aa20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 RRP15Q9Y3B9 282 aaKnown RBP20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 O00370 1275 aa20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 ASAP2O43150 1006 aa20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 SSTR3P32745 418 aaPredicted RBP20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 MBTD1Q05BQ5 628 aa20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 TFDP1Q14186 410 aa20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 ATF7IP2Q5U623 682 aa20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 RHBDF2Q6PJF5 856 aa20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 USP50Q70EL3 339 aaPredicted RBP20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 TRAPPC12Q8WVT3 735 aa20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 TMEM109Q9BVC6 243 aa20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 EPN3Q9H201 632 aa20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 CISHQ9NSE2 258 aa20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 LCMT1Q9UIC8 334 aa20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 PTPN22Q9Y2R2 807 aa20.14■□□□□ 0.81
CROCCP3-202ENST00000420820 TMEM191CA6NGB0 347 aa20.13■□□□□ 0.81
CROCCP3-202ENST00000420820 SHBGP04278 402 aa20.13■□□□□ 0.81
CROCCP3-202ENST00000420820 TMEM191BP0C7N4 346 aa20.13■□□□□ 0.81
CROCCP3-202ENST00000420820 TXNP10599 105 aaKnown RBP20.13■□□□□ 0.81
CROCCP3-202ENST00000420820 RARGP13631 454 aa20.13■□□□□ 0.81
CROCCP3-202ENST00000420820 IVDP26440 423 aa20.13■□□□□ 0.81
CROCCP3-202ENST00000420820 PTK6Q13882 451 aa20.13■□□□□ 0.81
CROCCP3-202ENST00000420820 SLMAPQ14BN4 828 aa20.13■□□□□ 0.81
CROCCP3-202ENST00000420820 PTGISQ16647 500 aa20.13■□□□□ 0.81
CROCCP3-202ENST00000420820 KRT71Q3SY84 523 aa20.13■□□□□ 0.81
CROCCP3-202ENST00000420820 DAB2IPQ5VWQ8 1189 aa20.13■□□□□ 0.81
CROCCP3-202ENST00000420820 EXD1Q8NHP7 514 aa20.13■□□□□ 0.81
CROCCP3-202ENST00000420820 L3MBTL3Q96JM7 780 aaPredicted RBP20.13■□□□□ 0.81
CROCCP3-202ENST00000420820 ZNF518BQ9C0D4 1074 aa20.13■□□□□ 0.81
CROCCP3-202ENST00000420820 CENPHQ9H3R5 247 aa20.13■□□□□ 0.81
CROCCP3-202ENST00000420820 PDGFCQ9NRA1 345 aa20.13■□□□□ 0.81
CROCCP3-202ENST00000420820 PCDHGC3Q9UN70 934 aa20.13■□□□□ 0.81
CROCCP3-202ENST00000420820 TNFSF13BQ9Y275 285 aa20.13■□□□□ 0.81
CROCCP3-202ENST00000420820 NEU2Q9Y3R4 380 aa20.13■□□□□ 0.81
CROCCP3-202ENST00000420820 PLXNA1Q9UIW2 1896 aa20.13■□□□□ 0.81
CROCCP3-202ENST00000420820 TLR3O15455 904 aaKnown RBP20.12■□□□□ 0.81
CROCCP3-202ENST00000420820 GJB1P08034 283 aa20.12■□□□□ 0.81
CROCCP3-202ENST00000420820 GJA5P36382 358 aa20.12■□□□□ 0.81
CROCCP3-202ENST00000420820 ASPAP45381 313 aa20.12■□□□□ 0.81
CROCCP3-202ENST00000420820 PPP2R2AP63151 447 aa20.12■□□□□ 0.81
CROCCP3-202ENST00000420820 POU5F1BQ06416 359 aa20.12■□□□□ 0.81
CROCCP3-202ENST00000420820 TTLL4Q14679 1199 aa20.12■□□□□ 0.81
CROCCP3-202ENST00000420820 EEF1DP3Q658K8 133 aa20.12■□□□□ 0.81
CROCCP3-202ENST00000420820 EFCAB12Q6NXP0 572 aa20.12■□□□□ 0.81
CROCCP3-202ENST00000420820 PGM2Q96G03 612 aa20.12■□□□□ 0.81
CROCCP3-202ENST00000420820 SEMA4AQ9H3S1 761 aa20.12■□□□□ 0.81
CROCCP3-202ENST00000420820 HOMER3Q9NSC5 361 aa20.12■□□□□ 0.81
CROCCP3-202ENST00000420820 IP6K2Q9UHH9 426 aa20.12■□□□□ 0.81
CROCCP3-202ENST00000420820 NOVA2Q9UNW9 492 aaKnown RBP20.12■□□□□ 0.81
CROCCP3-202ENST00000420820 ASB14A6NK59 587 aa20.12■□□□□ 0.81
CROCCP3-202ENST00000420820 C22orf31O95567 290 aa20.12■□□□□ 0.81
CROCCP3-202ENST00000420820 CALB1P05937 261 aa20.12■□□□□ 0.81
CROCCP3-202ENST00000420820 RALAP11233 206 aa20.12■□□□□ 0.81
CROCCP3-202ENST00000420820 CCT5P48643 541 aa20.12■□□□□ 0.81
CROCCP3-202ENST00000420820 KRT17Q04695 432 aa20.12■□□□□ 0.81
CROCCP3-202ENST00000420820 LLGL1Q15334 1064 aa20.12■□□□□ 0.81
CROCCP3-202ENST00000420820 LDLRAD1Q5T700 205 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms