RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 LRRIQ3A6PVS8 624 aaPredicted RBP15.57■□□□□ 0.08
PTPN18-204ENST00000420717 IKBKBO14920 756 aa15.57■□□□□ 0.08
PTPN18-204ENST00000420717 PER2O15055 1255 aa15.57■□□□□ 0.08
PTPN18-204ENST00000420717 SPTLC1O15269 473 aa15.57■□□□□ 0.08
PTPN18-204ENST00000420717 LINC01565O15544 149 aa15.57■□□□□ 0.08
PTPN18-204ENST00000420717 OAZ2O95190 189 aa15.57■□□□□ 0.08
PTPN18-204ENST00000420717 CSPG5O95196 566 aa15.57■□□□□ 0.08
PTPN18-204ENST00000420717 TNNC2P02585 160 aa15.57■□□□□ 0.08
PTPN18-204ENST00000420717 ITGB3P05106 788 aa15.57■□□□□ 0.08
PTPN18-204ENST00000420717 HOXB8P17481 243 aaPredicted RBP15.57■□□□□ 0.08
PTPN18-204ENST00000420717 PSMC2P35998 433 aaKnown RBP15.57■□□□□ 0.08
PTPN18-204ENST00000420717 PMS1P54277 932 aaKnown RBP15.57■□□□□ 0.08
PTPN18-204ENST00000420717 FKBP3Q00688 224 aaKnown RBP15.57■□□□□ 0.08
PTPN18-204ENST00000420717 CAMK4Q16566 473 aa15.57■□□□□ 0.08
PTPN18-204ENST00000420717 SV2CQ496J9 727 aa15.57■□□□□ 0.08
PTPN18-204ENST00000420717 VARS2Q5ST30 1063 aaKnown RBP15.57■□□□□ 0.08
PTPN18-204ENST00000420717 TTI2Q6NXR4 508 aa15.57■□□□□ 0.08
PTPN18-204ENST00000420717 LILRA6Q6PI73 481 aa15.57■□□□□ 0.08
PTPN18-204ENST00000420717 C15orf39Q6ZRI6 1047 aa15.57■□□□□ 0.08
PTPN18-204ENST00000420717 USP37Q86T82 979 aa15.57■□□□□ 0.08
PTPN18-204ENST00000420717 RBM23Q86U06 439 aaKnown RBP15.57■□□□□ 0.08
PTPN18-204ENST00000420717 FNBP1Q96RU3 617 aa15.57■□□□□ 0.08
PTPN18-204ENST00000420717 TSG101Q99816 390 aa15.57■□□□□ 0.08
PTPN18-204ENST00000420717 CLSTN3Q9BQT9 956 aa15.57■□□□□ 0.08
PTPN18-204ENST00000420717 VRTNQ9H8Y1 702 aa15.57■□□□□ 0.08
PTPN18-204ENST00000420717 PRDM6Q9NQX0 595 aa15.57■□□□□ 0.08
PTPN18-204ENST00000420717 GDAP2Q9NXN4 497 aa15.57■□□□□ 0.08
PTPN18-204ENST00000420717 CLDND1Q9NY35 253 aa15.57■□□□□ 0.08
PTPN18-204ENST00000420717 I3L4J1 428 aa15.56■□□□□ 0.08
PTPN18-204ENST00000420717 ODC1P11926 461 aa15.56■□□□□ 0.08
PTPN18-204ENST00000420717 POLR2BP30876 1174 aaKnown RBP15.56■□□□□ 0.08
PTPN18-204ENST00000420717 RBP5P82980 135 aa15.56■□□□□ 0.08
PTPN18-204ENST00000420717 DLX2Q07687 328 aaPredicted RBP15.56■□□□□ 0.08
PTPN18-204ENST00000420717 ADAM9Q13443 819 aa15.56■□□□□ 0.08
PTPN18-204ENST00000420717 RAB33AQ14088 237 aa15.56■□□□□ 0.08
PTPN18-204ENST00000420717 SKIV2LQ15477 1246 aaKnown RBP15.56■□□□□ 0.08
PTPN18-204ENST00000420717 AAK1Q2M2I8 961 aa15.56■□□□□ 0.08
PTPN18-204ENST00000420717 PUS10Q3MIT2 529 aaKnown RBP15.56■□□□□ 0.08
PTPN18-204ENST00000420717 C1orf220Q5T0J3 134 aa15.56■□□□□ 0.08
PTPN18-204ENST00000420717 ANKRD40Q6AI12 368 aa15.56■□□□□ 0.08
PTPN18-204ENST00000420717 PRSS55Q6UWB4 352 aaPredicted RBP15.56■□□□□ 0.08
PTPN18-204ENST00000420717 TRAPPC11Q7Z392 1133 aa15.56■□□□□ 0.08
PTPN18-204ENST00000420717 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.56■□□□□ 0.08
PTPN18-204ENST00000420717 FAM186BQ8IYM0 893 aa15.56■□□□□ 0.08
PTPN18-204ENST00000420717 RDH13Q8NBN7 331 aa15.56■□□□□ 0.08
PTPN18-204ENST00000420717 SMRP1Q8NCR6 262 aa15.56■□□□□ 0.08
PTPN18-204ENST00000420717 NOC3LQ8WTT2 800 aaKnown RBP15.56■□□□□ 0.08
PTPN18-204ENST00000420717 ZNF516Q92618 1163 aa15.56■□□□□ 0.08
PTPN18-204ENST00000420717 CEP63Q96MT8 703 aa15.56■□□□□ 0.08
PTPN18-204ENST00000420717 DSEQ9UL01 958 aa15.56■□□□□ 0.08
PTPN18-204ENST00000420717 BICDL2A1A5D9 508 aa15.55■□□□□ 0.08
PTPN18-204ENST00000420717 H7C4K7 107 aa15.55■□□□□ 0.08
PTPN18-204ENST00000420717 BIN1O00499 593 aa15.55■□□□□ 0.08
PTPN18-204ENST00000420717 C2CD2LO14523 706 aa15.55■□□□□ 0.08
PTPN18-204ENST00000420717 CETN3O15182 167 aa15.55■□□□□ 0.08
PTPN18-204ENST00000420717 GLUD1P00367 558 aa15.55■□□□□ 0.08
PTPN18-204ENST00000420717 DLATP10515 647 aaKnown RBP15.55■□□□□ 0.08
PTPN18-204ENST00000420717 BFSP1Q12934 665 aa15.55■□□□□ 0.08
PTPN18-204ENST00000420717 ZACNQ401N2 412 aa15.55■□□□□ 0.08
PTPN18-204ENST00000420717 LMBRD2Q68DH5 695 aaPredicted RBP15.55■□□□□ 0.08
PTPN18-204ENST00000420717 ZNF280DQ6N043 979 aa15.55■□□□□ 0.08
PTPN18-204ENST00000420717 ANKRD54Q6NXT1 300 aa15.55■□□□□ 0.08
PTPN18-204ENST00000420717 RTL10Q7L3V2 364 aa15.55■□□□□ 0.08
PTPN18-204ENST00000420717 MLKLQ8NB16 471 aa15.55■□□□□ 0.08
PTPN18-204ENST00000420717 CMASQ8NFW8 434 aaPredicted RBP15.55■□□□□ 0.08
PTPN18-204ENST00000420717 CCDC127Q96BQ5 260 aa15.55■□□□□ 0.08
PTPN18-204ENST00000420717 FAM84AQ96KN4 292 aa15.55■□□□□ 0.08
PTPN18-204ENST00000420717 SENP8Q96LD8 212 aa15.55■□□□□ 0.08
PTPN18-204ENST00000420717 DUSP9Q99956 384 aaKnown RBP15.55■□□□□ 0.08
PTPN18-204ENST00000420717 DPP7Q9UHL4 492 aa15.55■□□□□ 0.08
PTPN18-204ENST00000420717 FBXW11Q9UKB1 542 aa15.55■□□□□ 0.08
PTPN18-204ENST00000420717 MAFFQ9ULX9 164 aa15.55■□□□□ 0.08
PTPN18-204ENST00000420717 TRIM49BA6NDI0 452 aa15.54■□□□□ 0.08
PTPN18-204ENST00000420717 KPNA7A9QM74 516 aa15.54■□□□□ 0.08
PTPN18-204ENST00000420717 C4BPAP04003 597 aaKnown RBP15.54■□□□□ 0.08
PTPN18-204ENST00000420717 POU2F2P09086 479 aa15.54■□□□□ 0.08
PTPN18-204ENST00000420717 EPCAMP16422 314 aa15.54■□□□□ 0.08
PTPN18-204ENST00000420717 TNNI1P19237 187 aa15.54■□□□□ 0.08
PTPN18-204ENST00000420717 KCNA5P22460 613 aa15.54■□□□□ 0.08
PTPN18-204ENST00000420717 KLRC2P26717 231 aa15.54■□□□□ 0.08
PTPN18-204ENST00000420717 ATICP31939 592 aa15.54■□□□□ 0.08
PTPN18-204ENST00000420717 GTF2H1P32780 548 aa15.54■□□□□ 0.08
PTPN18-204ENST00000420717 VAMP7P51809 220 aa15.54■□□□□ 0.08
PTPN18-204ENST00000420717 MRPS5P82675 430 aaKnown RBP15.54■□□□□ 0.08
PTPN18-204ENST00000420717 RBM10P98175 930 aaKnown RBP15.54■□□□□ 0.08
PTPN18-204ENST00000420717 YWHAHQ04917 246 aaPredicted RBP15.54■□□□□ 0.08
PTPN18-204ENST00000420717 PAK1Q13153 545 aa15.54■□□□□ 0.08
PTPN18-204ENST00000420717 SMAD4Q13485 552 aaKnown RBP15.54■□□□□ 0.08
PTPN18-204ENST00000420717 CT47A1Q5JQC4 288 aaPredicted RBP15.54■□□□□ 0.08
PTPN18-204ENST00000420717 TDRD10Q5VZ19 366 aaKnown RBP15.54■□□□□ 0.08
PTPN18-204ENST00000420717 CEP135Q66GS9 1140 aa15.54■□□□□ 0.08
PTPN18-204ENST00000420717 SYCE2Q6PIF2 218 aa15.54■□□□□ 0.08
PTPN18-204ENST00000420717 RSPO2Q6UXX9 243 aaPredicted RBP15.54■□□□□ 0.08
PTPN18-204ENST00000420717 CEP57Q86XR8 500 aa15.54■□□□□ 0.08
PTPN18-204ENST00000420717 CSGALNACT2Q8N6G5 542 aa15.54■□□□□ 0.08
PTPN18-204ENST00000420717 NELFBQ8WX92 580 aa15.54■□□□□ 0.08
PTPN18-204ENST00000420717 POP1Q99575 1024 aaKnown RBP15.54■□□□□ 0.08
PTPN18-204ENST00000420717 XYLT2Q9H1B5 865 aa15.54■□□□□ 0.08
PTPN18-204ENST00000420717 S1PR5Q9H228 398 aa15.54■□□□□ 0.08
PTPN18-204ENST00000420717 PLEKHA4Q9H4M7 779 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms