RNA–Protein interactions for RNA: ENST00000420515.1

FAAP20-207, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-207ENST00000420515 KRT39Q6A163 491 aa29.22■■■□□ 2.27
FAAP20-207ENST00000420515 VPS52Q8N1B4 723 aa29.22■■■□□ 2.27
FAAP20-207ENST00000420515 PI4K2AQ9BTU6 479 aa29.22■■■□□ 2.27
FAAP20-207ENST00000420515 MAGEC2Q9UBF1 373 aaPredicted RBP29.22■■■□□ 2.27
FAAP20-207ENST00000420515 SF3B1O75533 1304 aaKnown RBP eCLIP29.22■■■□□ 2.279e-6■■■■■ 68.9
FAAP20-207ENST00000420515 TKTP29401 623 aaKnown RBP29.21■■■□□ 2.27
FAAP20-207ENST00000420515 PIK3CAP42336 1068 aa29.21■■■□□ 2.27
FAAP20-207ENST00000420515 FAM171A1Q5VUB5 890 aa29.21■■■□□ 2.27
FAAP20-207ENST00000420515 LRRC52Q8N7C0 313 aa29.21■■■□□ 2.27
FAAP20-207ENST00000420515 FAM200AQ8TCP9 573 aa29.21■■■□□ 2.27
FAAP20-207ENST00000420515 HPDLQ96IR7 371 aa29.21■■■□□ 2.27
FAAP20-207ENST00000420515 SUSD3Q96L08 255 aa29.21■■■□□ 2.27
FAAP20-207ENST00000420515 ZNF560Q96MR9 790 aa29.21■■■□□ 2.27
FAAP20-207ENST00000420515 TUBGCP2Q9BSJ2 902 aa29.21■■■□□ 2.27
FAAP20-207ENST00000420515 ZBP1Q9H171 429 aa29.21■■■□□ 2.27
FAAP20-207ENST00000420515 TAB2Q9NYJ8 693 aa29.21■■■□□ 2.27
FAAP20-207ENST00000420515 CARNS1A5YM72 827 aa29.2■■■□□ 2.27
FAAP20-207ENST00000420515 SOD2P04179 222 aa29.2■■■□□ 2.27
FAAP20-207ENST00000420515 TRPC3Q13507 836 aa29.2■■■□□ 2.27
FAAP20-207ENST00000420515 ADGRE1Q14246 886 aa29.2■■■□□ 2.27
FAAP20-207ENST00000420515 KRT31Q15323 416 aa29.2■■■□□ 2.27
FAAP20-207ENST00000420515 RTP2Q5QGT7 225 aa29.2■■■□□ 2.27
FAAP20-207ENST00000420515 SPOPLQ6IQ16 392 aa29.2■■■□□ 2.27
FAAP20-207ENST00000420515 HERC2P3Q9BVR0 1158 aa29.2■■■□□ 2.27
FAAP20-207ENST00000420515 LZTS1Q9Y250 596 aa29.2■■■□□ 2.27
FAAP20-207ENST00000420515 TIMM13Q9Y5L4 95 aaPredicted RBP29.2■■■□□ 2.27
FAAP20-207ENST00000420515 SMTNL1A8MU46 457 aa29.2■■■□□ 2.26
FAAP20-207ENST00000420515 KPNA7A9QM74 516 aa29.2■■■□□ 2.26
FAAP20-207ENST00000420515 AFPP02771 609 aaKnown RBP29.2■■■□□ 2.26
FAAP20-207ENST00000420515 EEF1GP26641 437 aaKnown RBP29.2■■■□□ 2.26
FAAP20-207ENST00000420515 MYL7Q01449 175 aa29.2■■■□□ 2.26
FAAP20-207ENST00000420515 GPR153Q6NV75 609 aa29.2■■■□□ 2.26
FAAP20-207ENST00000420515 SENP8Q96LD8 212 aa29.2■■■□□ 2.26
FAAP20-207ENST00000420515 BECN2A8MW95 431 aa29.19■■■□□ 2.26
FAAP20-207ENST00000420515 M0QZQ0 153 aa29.19■■■□□ 2.26
FAAP20-207ENST00000420515 STX10O60499 249 aa29.19■■■□□ 2.26
FAAP20-207ENST00000420515 PRKCSHP14314 528 aaPredicted RBP29.19■■■□□ 2.26
FAAP20-207ENST00000420515 MAN2A1Q16706 1144 aa29.19■■■□□ 2.26
FAAP20-207ENST00000420515 SV2CQ496J9 727 aa29.19■■■□□ 2.26
FAAP20-207ENST00000420515 CEP57Q86XR8 500 aa29.19■■■□□ 2.26
FAAP20-207ENST00000420515 TLR9Q9NR96 1032 aa29.19■■■□□ 2.26
FAAP20-207ENST00000420515 CHST7Q9NS84 486 aa29.19■■■□□ 2.26
FAAP20-207ENST00000420515 FGFR3P22607 806 aa29.18■■■□□ 2.26
FAAP20-207ENST00000420515 PNPLA4P41247 253 aa29.18■■■□□ 2.26
FAAP20-207ENST00000420515 UBE3AQ05086 875 aa29.18■■■□□ 2.26
FAAP20-207ENST00000420515 PLPP4Q5VZY2 271 aa29.18■■■□□ 2.26
FAAP20-207ENST00000420515 DSTYKQ6XUX3 929 aa29.18■■■□□ 2.26
FAAP20-207ENST00000420515 APTXQ7Z2E3 356 aaKnown RBP29.18■■■□□ 2.26
FAAP20-207ENST00000420515 RNF214Q8ND24 703 aa29.18■■■□□ 2.26
FAAP20-207ENST00000420515 TCF25Q9BQ70 676 aa29.18■■■□□ 2.26
FAAP20-207ENST00000420515 APOBEC3GQ9HC16 384 aaKnown RBP29.18■■■□□ 2.26
FAAP20-207ENST00000420515 POLIQ9UNA4 740 aa29.18■■■□□ 2.26
FAAP20-207ENST00000420515 COQ4Q9Y3A0 265 aa29.18■■■□□ 2.26
FAAP20-207ENST00000420515 C2CD2LO14523 706 aa29.17■■■□□ 2.26
FAAP20-207ENST00000420515 FSCN2O14926 492 aa29.17■■■□□ 2.26
FAAP20-207ENST00000420515 ZNF699Q32M78 642 aa29.17■■■□□ 2.26
FAAP20-207ENST00000420515 PRSS55Q6UWB4 352 aaPredicted RBP29.17■■■□□ 2.26
FAAP20-207ENST00000420515 DEFB123Q8N688 67 aa29.17■■■□□ 2.26
FAAP20-207ENST00000420515 FBXL13Q8NEE6 735 aa29.17■■■□□ 2.26
FAAP20-207ENST00000420515 GUCD1Q96NT3 240 aa29.17■■■□□ 2.26
FAAP20-207ENST00000420515 VPS16Q9H269 839 aa29.17■■■□□ 2.26
FAAP20-207ENST00000420515 RAB20Q9NX57 234 aa29.17■■■□□ 2.26
FAAP20-207ENST00000420515 PUF60Q9UHX1 559 aaKnown RBP29.17■■■□□ 2.26
FAAP20-207ENST00000420515 SNX9Q9Y5X1 595 aa29.17■■■□□ 2.26
FAAP20-207ENST00000420515 PLXNA3P51805 1871 aa29.17■■■□□ 2.26
FAAP20-207ENST00000420515 CAVIN2O95810 425 aa29.16■■■□□ 2.26
FAAP20-207ENST00000420515 CTSAP10619 480 aa29.16■■■□□ 2.26
FAAP20-207ENST00000420515 MYO1EQ12965 1108 aa29.16■■■□□ 2.26
FAAP20-207ENST00000420515 USP41Q3LFD5 358 aa29.16■■■□□ 2.26
FAAP20-207ENST00000420515 VWA3BQ502W6 1294 aa29.16■■■□□ 2.26
FAAP20-207ENST00000420515 TMC7Q7Z402 723 aa29.16■■■□□ 2.26
FAAP20-207ENST00000420515 GAS2L3Q86XJ1 694 aa29.16■■■□□ 2.26
FAAP20-207ENST00000420515 ENTPD7Q9NQZ7 604 aa29.16■■■□□ 2.26
FAAP20-207ENST00000420515 LIMA1Q9UHB6 759 aaKnown RBP29.16■■■□□ 2.26
FAAP20-207ENST00000420515 PCDHB8Q9UN66 801 aa29.16■■■□□ 2.26
FAAP20-207ENST00000420515 R3HCC1Q9Y3T6 440 aaKnown RBP29.16■■■□□ 2.26
FAAP20-207ENST00000420515 HIDE1A8MVS5 230 aa29.15■■■□□ 2.26
FAAP20-207ENST00000420515 CYB561D2O14569 222 aa29.15■■■□□ 2.26
FAAP20-207ENST00000420515 TRAPPC3O43617 180 aa29.15■■■□□ 2.26
FAAP20-207ENST00000420515 ASS1P00966 412 aaKnown RBP29.15■■■□□ 2.26
FAAP20-207ENST00000420515 GLUD2P49448 558 aa29.15■■■□□ 2.26
FAAP20-207ENST00000420515 DSG1Q02413 1049 aa29.15■■■□□ 2.26
FAAP20-207ENST00000420515 ELAVL2Q12926 359 aaKnown RBP29.15■■■□□ 2.26
FAAP20-207ENST00000420515 PTPN14Q15678 1187 aa29.15■■■□□ 2.26
FAAP20-207ENST00000420515 WDR72Q3MJ13 1102 aa29.15■■■□□ 2.26
FAAP20-207ENST00000420515 KIAA0319Q5VV43 1072 aa29.15■■■□□ 2.26
FAAP20-207ENST00000420515 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.15■■■□□ 2.26
FAAP20-207ENST00000420515 LMO3Q8TAP4 145 aa29.15■■■□□ 2.26
FAAP20-207ENST00000420515 TTPALQ9BTX7 342 aa29.15■■■□□ 2.26
FAAP20-207ENST00000420515 NDST4Q9H3R1 872 aa29.15■■■□□ 2.26
FAAP20-207ENST00000420515 GDAP2Q9NXN4 497 aa29.15■■■□□ 2.26
FAAP20-207ENST00000420515 NXF1Q9UBU9 619 aaKnown RBP29.15■■■□□ 2.26
FAAP20-207ENST00000420515 L1RE1Q9UN81 338 aa29.15■■■□□ 2.26
FAAP20-207ENST00000420515 PRRC2BQ5JSZ5 2229 aaKnown RBP29.15■■■□□ 2.26
FAAP20-207ENST00000420515 STAU1O95793 577 aaKnown RBP29.15■■■□□ 2.26
FAAP20-207ENST00000420515 ATICP31939 592 aa29.15■■■□□ 2.26
FAAP20-207ENST00000420515 ADGRD2Q7Z7M1 963 aa29.15■■■□□ 2.26
FAAP20-207ENST00000420515 MYLIPQ8WY64 445 aa29.15■■■□□ 2.26
FAAP20-207ENST00000420515 RIN2Q8WYP3 895 aaPredicted RBP29.15■■■□□ 2.26
FAAP20-207ENST00000420515 CRACR2AQ9BSW2 395 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms