RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 PLIN2Q99541 437 aa14.08□□□□□ -0.16
LINC00339-203ENST00000420503 TCHPQ9BT92 498 aa14.08□□□□□ -0.16
LINC00339-203ENST00000420503 KMT5AQ9NQR1 393 aa14.08□□□□□ -0.16
LINC00339-203ENST00000420503 CDV3Q9UKY7 258 aaKnown RBP14.08□□□□□ -0.16
LINC00339-203ENST00000420503 A0A1W2PRU2 124 aa14.07□□□□□ -0.16
LINC00339-203ENST00000420503 HRO43593 1189 aa14.07□□□□□ -0.16
LINC00339-203ENST00000420503 GDF9O60383 454 aa14.07□□□□□ -0.16
LINC00339-203ENST00000420503 MCF2P10911 925 aa14.07□□□□□ -0.16
LINC00339-203ENST00000420503 CPB1P15086 417 aa14.07□□□□□ -0.16
LINC00339-203ENST00000420503 PSMC3P17980 439 aa14.07□□□□□ -0.16
LINC00339-203ENST00000420503 TNFSF9P41273 254 aa14.07□□□□□ -0.16
LINC00339-203ENST00000420503 PTGDRQ13258 359 aa14.07□□□□□ -0.16
LINC00339-203ENST00000420503 DMP1Q13316 513 aaPredicted RBP14.07□□□□□ -0.16
LINC00339-203ENST00000420503 SAFBQ15424 915 aaKnown RBP eCLIP14.07□□□□□ -0.16
LINC00339-203ENST00000420503 ZRSR1Q15695 479 aaKnown RBP14.07□□□□□ -0.16
LINC00339-203ENST00000420503 ZNF280DQ6N043 979 aa14.07□□□□□ -0.16
LINC00339-203ENST00000420503 C1orf186Q6ZWK4 172 aa14.07□□□□□ -0.16
LINC00339-203ENST00000420503 IGSF22Q8N9C0 903 aa14.07□□□□□ -0.16
LINC00339-203ENST00000420503 NELL2Q99435 816 aa14.07□□□□□ -0.16
LINC00339-203ENST00000420503 MKNK1Q9BUB5 465 aa14.07□□□□□ -0.16
LINC00339-203ENST00000420503 FOXP1Q9H334 677 aaPredicted RBP14.07□□□□□ -0.16
LINC00339-203ENST00000420503 TOPORSQ9NS56 1045 aaPredicted RBP14.07□□□□□ -0.16
LINC00339-203ENST00000420503 SLC38A7Q9NVC3 462 aa14.07□□□□□ -0.16
LINC00339-203ENST00000420503 AFF4Q9UHB7 1163 aaKnown RBP14.07□□□□□ -0.16
LINC00339-203ENST00000420503 SLC27A5Q9Y2P5 690 aa14.07□□□□□ -0.16
LINC00339-203ENST00000420503 MRPS17Q9Y2R5 130 aaKnown RBP14.07□□□□□ -0.16
LINC00339-203ENST00000420503 TSC2P49815 1807 aa14.06□□□□□ -0.16
LINC00339-203ENST00000420503 USP24Q9UPU5 2620 aa14.06□□□□□ -0.16
LINC00339-203ENST00000420503 H7C4K7 107 aa14.06□□□□□ -0.16
LINC00339-203ENST00000420503 NCAM2O15394 837 aa14.06□□□□□ -0.16
LINC00339-203ENST00000420503 EPHA5P54756 1037 aa14.06□□□□□ -0.16
LINC00339-203ENST00000420503 LMNB2Q03252 620 aa14.06□□□□□ -0.16
LINC00339-203ENST00000420503 CYP4A22Q5TCH4 519 aa14.06□□□□□ -0.16
LINC00339-203ENST00000420503 PKN3Q6P5Z2 889 aa14.06□□□□□ -0.16
LINC00339-203ENST00000420503 RTL10Q7L3V2 364 aa14.06□□□□□ -0.16
LINC00339-203ENST00000420503 FBXO18Q8NFZ0 1043 aa14.06□□□□□ -0.16
LINC00339-203ENST00000420503 LRRC15Q8TF66 581 aa14.06□□□□□ -0.16
LINC00339-203ENST00000420503 ZNF512Q96ME7 567 aaPredicted RBP14.06□□□□□ -0.16
LINC00339-203ENST00000420503 PNMA5Q96PV4 448 aa14.06□□□□□ -0.16
LINC00339-203ENST00000420503 SMG9Q9H0W8 520 aaKnown RBP14.06□□□□□ -0.16
LINC00339-203ENST00000420503 SLITRK6Q9H5Y7 841 aa14.06□□□□□ -0.16
LINC00339-203ENST00000420503 TMEM134Q9H6X4 195 aa14.06□□□□□ -0.16
LINC00339-203ENST00000420503 POLR3BQ9NW08 1133 aaPredicted RBP14.06□□□□□ -0.16
LINC00339-203ENST00000420503 GMEB2Q9UKD1 530 aa14.06□□□□□ -0.16
LINC00339-203ENST00000420503 PCDHB8Q9UN66 801 aa14.06□□□□□ -0.16
LINC00339-203ENST00000420503 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.05□□□□□ -0.16
LINC00339-203ENST00000420503 K7ESF4 209 aa14.05□□□□□ -0.16
LINC00339-203ENST00000420503 ZNF197O14709 1029 aa14.05□□□□□ -0.16
LINC00339-203ENST00000420503 ZNF263O14978 683 aa14.05□□□□□ -0.16
LINC00339-203ENST00000420503 PRAMEF12O95522 483 aa14.05□□□□□ -0.16
LINC00339-203ENST00000420503 RPL9P32969 192 aaKnown RBP14.05□□□□□ -0.16
LINC00339-203ENST00000420503 TNK2Q07912 1038 aa14.05□□□□□ -0.16
LINC00339-203ENST00000420503 DUSP4Q13115 394 aa14.05□□□□□ -0.16
LINC00339-203ENST00000420503 NOLC1Q14978 699 aaKnown RBP eCLIP14.05□□□□□ -0.16
LINC00339-203ENST00000420503 CCDC6Q16204 474 aa14.05□□□□□ -0.16
LINC00339-203ENST00000420503 TPGS2Q68CL5 300 aa14.05□□□□□ -0.16
LINC00339-203ENST00000420503 IQCEQ6IPM2 695 aa14.05□□□□□ -0.16
LINC00339-203ENST00000420503 GAREM2Q75VX8 874 aa14.05□□□□□ -0.16
LINC00339-203ENST00000420503 ATAD1Q8NBU5 361 aa14.05□□□□□ -0.16
LINC00339-203ENST00000420503 TMEM161BQ8NDZ6 487 aa14.05□□□□□ -0.16
LINC00339-203ENST00000420503 BEST2Q8NFU1 509 aa14.05□□□□□ -0.16
LINC00339-203ENST00000420503 IRF7Q92985 503 aa14.05□□□□□ -0.16
LINC00339-203ENST00000420503 ASAH2Q9NR71 780 aa14.05□□□□□ -0.16
LINC00339-203ENST00000420503 GTSE1Q9NYZ3 720 aa14.05□□□□□ -0.16
LINC00339-203ENST00000420503 SCN1AP35498 2009 aa14.05□□□□□ -0.16
LINC00339-203ENST00000420503 MAN2B1O00754 1011 aa14.04□□□□□ -0.16
LINC00339-203ENST00000420503 MICAL2O94851 1124 aa14.04□□□□□ -0.16
LINC00339-203ENST00000420503 MAPTP10636 758 aaKnown RBP14.04□□□□□ -0.16
LINC00339-203ENST00000420503 MUTP22033 750 aa14.04□□□□□ -0.16
LINC00339-203ENST00000420503 PXNP49023 591 aaPredicted RBP14.04□□□□□ -0.16
LINC00339-203ENST00000420503 MFSD6LQ8IWD5 586 aa14.04□□□□□ -0.16
LINC00339-203ENST00000420503 STKLD1Q8NE28 680 aa14.04□□□□□ -0.16
LINC00339-203ENST00000420503 KIF12Q96FN5 646 aa14.04□□□□□ -0.16
LINC00339-203ENST00000420503 LPIN3Q9BQK8 851 aa14.04□□□□□ -0.16
LINC00339-203ENST00000420503 TRPV4Q9HBA0 871 aa14.04□□□□□ -0.16
LINC00339-203ENST00000420503 DNM3Q9UQ16 869 aa14.04□□□□□ -0.16
LINC00339-203ENST00000420503 SPAG17Q6Q759 2223 aa14.04□□□□□ -0.16
LINC00339-203ENST00000420503 MTMR11A4FU01 709 aa14.03□□□□□ -0.16
LINC00339-203ENST00000420503 M0QZQ0 153 aa14.03□□□□□ -0.16
LINC00339-203ENST00000420503 KCNA4P22459 653 aa14.03□□□□□ -0.16
LINC00339-203ENST00000420503 CXCL12P48061 93 aa14.03□□□□□ -0.16
LINC00339-203ENST00000420503 CCR3P51677 355 aa14.03□□□□□ -0.16
LINC00339-203ENST00000420503 CYP4F8P98187 520 aa14.03□□□□□ -0.16
LINC00339-203ENST00000420503 ORC2Q13416 577 aaPredicted RBP14.03□□□□□ -0.16
LINC00339-203ENST00000420503 SIM2Q14190 667 aaPredicted RBP14.03□□□□□ -0.16
LINC00339-203ENST00000420503 PON2Q15165 354 aa14.03□□□□□ -0.16
LINC00339-203ENST00000420503 ZBTB6Q15916 424 aa14.03□□□□□ -0.16
LINC00339-203ENST00000420503 LAIR1Q6GTX8 287 aa14.03□□□□□ -0.16
LINC00339-203ENST00000420503 APBB1IPQ7Z5R6 666 aaPredicted RBP14.03□□□□□ -0.16
LINC00339-203ENST00000420503 ARID3BQ8IVW6 561 aaPredicted RBP14.03□□□□□ -0.16
LINC00339-203ENST00000420503 ELMOD1Q8N336 334 aa14.03□□□□□ -0.16
LINC00339-203ENST00000420503 APPL2Q8NEU8 664 aa14.03□□□□□ -0.16
LINC00339-203ENST00000420503 OR10T2Q8NGX3 314 aa14.03□□□□□ -0.16
LINC00339-203ENST00000420503 DEPDC1BQ8WUY9 529 aa14.03□□□□□ -0.16
LINC00339-203ENST00000420503 SECISBP2LQ93073 1101 aaKnown RBP14.03□□□□□ -0.16
LINC00339-203ENST00000420503 RXFP3Q9NSD7 469 aa14.03□□□□□ -0.16
LINC00339-203ENST00000420503 SEMA4GQ9NTN9 838 aa14.03□□□□□ -0.16
LINC00339-203ENST00000420503 NUP210Q8TEM1 1887 aaPredicted RBP14.03□□□□□ -0.16
LINC00339-203ENST00000420503 TTC26A0AVF1 554 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 LACTBL1A8MY62 500 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms