RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 TSC2P49815 1807 aa22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 EYSQ5T1H1 3165 aa22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 FSD2A1L4K1 749 aa22.25■■□□□ 1.15
HMGXB4-203ENST00000420166 CLASP2O75122 1294 aaKnown RBP22.25■■□□□ 1.15
HMGXB4-203ENST00000420166 AP3M2P53677 418 aa22.25■■□□□ 1.15
HMGXB4-203ENST00000420166 CREMQ03060 361 aa22.25■■□□□ 1.15
HMGXB4-203ENST00000420166 BFSP1Q12934 665 aa22.25■■□□□ 1.15
HMGXB4-203ENST00000420166 PSMD5Q16401 504 aa22.25■■□□□ 1.15
HMGXB4-203ENST00000420166 SV2CQ496J9 727 aa22.25■■□□□ 1.15
HMGXB4-203ENST00000420166 C1orf220Q5T0J3 134 aa22.25■■□□□ 1.15
HMGXB4-203ENST00000420166 DSTYKQ6XUX3 929 aa22.25■■□□□ 1.15
HMGXB4-203ENST00000420166 LNX1Q8TBB1 728 aaPredicted RBP22.25■■□□□ 1.15
HMGXB4-203ENST00000420166 PABPC5Q96DU9 382 aaKnown RBP22.25■■□□□ 1.15
HMGXB4-203ENST00000420166 BORCS6Q96GS4 357 aa22.25■■□□□ 1.15
HMGXB4-203ENST00000420166 SENP8Q96LD8 212 aa22.25■■□□□ 1.15
HMGXB4-203ENST00000420166 KLHL5Q96PQ7 755 aa22.25■■□□□ 1.15
HMGXB4-203ENST00000420166 FNIP2Q9P278 1114 aa22.25■■□□□ 1.15
HMGXB4-203ENST00000420166 RWDD2AQ9UIY3 292 aa22.25■■□□□ 1.15
HMGXB4-203ENST00000420166 PRUNE2Q8WUY3 3088 aa22.25■■□□□ 1.15
HMGXB4-203ENST00000420166 PLXNA3P51805 1871 aa22.24■■□□□ 1.15
HMGXB4-203ENST00000420166 IKBKBO14920 756 aa22.24■■□□□ 1.15
HMGXB4-203ENST00000420166 TEX28O15482 410 aa22.24■■□□□ 1.15
HMGXB4-203ENST00000420166 ADH1AP07327 375 aa22.24■■□□□ 1.15
HMGXB4-203ENST00000420166 MCCD1P59942 119 aaPredicted RBP22.24■■□□□ 1.15
HMGXB4-203ENST00000420166 ADAM15Q13444 863 aa22.24■■□□□ 1.15
HMGXB4-203ENST00000420166 CTC1Q2NKJ3 1217 aa22.24■■□□□ 1.15
HMGXB4-203ENST00000420166 ANKS3Q6ZW76 656 aa22.24■■□□□ 1.15
HMGXB4-203ENST00000420166 APPL2Q8NEU8 664 aa22.24■■□□□ 1.15
HMGXB4-203ENST00000420166 MTRRQ9UBK8 725 aa22.24■■□□□ 1.15
HMGXB4-203ENST00000420166 DACH1Q9UI36 760 aa22.24■■□□□ 1.15
HMGXB4-203ENST00000420166 R3HCC1Q9Y3T6 440 aaKnown RBP22.24■■□□□ 1.15
HMGXB4-203ENST00000420166 KPNA7A9QM74 516 aa22.23■■□□□ 1.15
HMGXB4-203ENST00000420166 LINC01565O15544 149 aa22.23■■□□□ 1.15
HMGXB4-203ENST00000420166 SLC34A2O95436 690 aa22.23■■□□□ 1.15
HMGXB4-203ENST00000420166 GLP2RO95838 553 aa22.23■■□□□ 1.15
HMGXB4-203ENST00000420166 TRIM49P0CI25 452 aa22.23■■□□□ 1.15
HMGXB4-203ENST00000420166 TRIM49CP0CI26 452 aa22.23■■□□□ 1.15
HMGXB4-203ENST00000420166 ODC1P11926 461 aa22.23■■□□□ 1.15
HMGXB4-203ENST00000420166 RPL17P18621 184 aaKnown RBP22.23■■□□□ 1.15
HMGXB4-203ENST00000420166 KLHL40Q2TBA0 621 aa22.23■■□□□ 1.15
HMGXB4-203ENST00000420166 VARS2Q5ST30 1063 aaKnown RBP22.23■■□□□ 1.15
HMGXB4-203ENST00000420166 TDRD10Q5VZ19 366 aaKnown RBP22.23■■□□□ 1.15
HMGXB4-203ENST00000420166 CAVIN1Q6NZI2 390 aaKnown RBP22.23■■□□□ 1.15
HMGXB4-203ENST00000420166 VN1R2Q8NFZ6 395 aa22.23■■□□□ 1.15
HMGXB4-203ENST00000420166 SYAP1Q96A49 352 aaPredicted RBP22.23■■□□□ 1.15
HMGXB4-203ENST00000420166 PRDM6Q9NQX0 595 aa22.23■■□□□ 1.15
HMGXB4-203ENST00000420166 CLDND1Q9NY35 253 aa22.23■■□□□ 1.15
HMGXB4-203ENST00000420166 ARHGEF37A1IGU5 675 aa22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 PHACTR2O75167 634 aa22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 C4BPAP04003 597 aaKnown RBP22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 TYMPP19971 482 aa22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 KLRC2P26717 231 aa22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 NDUFV1P49821 464 aa22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 BIRC3Q13489 604 aa22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 KCNC3Q14003 757 aa22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 MRPL58Q14197 206 aaKnown RBP22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 ZACNQ401N2 412 aa22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 FILIP1Q7Z7B0 1213 aa22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 PPFIBP1Q86W92 1011 aa22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 SLC22A17Q8WUG5 538 aa22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 HLA-CQ95604 372 aa22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 HPDLQ96IR7 371 aa22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 MED15Q96RN5 788 aa22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 CLSTN3Q9BQT9 956 aa22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 UBE2ZQ9H832 354 aaPredicted RBP22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 COG5Q9UP83 839 aa22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 TIMM13Q9Y5L4 95 aaPredicted RBP22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 BACE2Q9Y5Z0 518 aa22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 HCFC2Q9Y5Z7 792 aa22.22■■□□□ 1.15
HMGXB4-203ENST00000420166 MTCL1Q9Y4B5 1905 aaKnown RBP22.21■■□□□ 1.15
HMGXB4-203ENST00000420166 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.21■■□□□ 1.15
HMGXB4-203ENST00000420166 H7C4K7 107 aa22.21■■□□□ 1.15
HMGXB4-203ENST00000420166 CYB561D2O14569 222 aa22.21■■□□□ 1.15
HMGXB4-203ENST00000420166 CST3P01034 146 aaPredicted RBP22.21■■□□□ 1.15
HMGXB4-203ENST00000420166 CYP11A1P05108 521 aa22.21■■□□□ 1.15
HMGXB4-203ENST00000420166 ERCC5P28715 1186 aaPredicted RBP22.21■■□□□ 1.15
HMGXB4-203ENST00000420166 RBM10P98175 930 aaKnown RBP22.21■■□□□ 1.15
HMGXB4-203ENST00000420166 MYO1EQ12965 1108 aa22.21■■□□□ 1.15
HMGXB4-203ENST00000420166 TRPC3Q13507 836 aa22.21■■□□□ 1.15
HMGXB4-203ENST00000420166 LLGL2Q6P1M3 1020 aa22.21■■□□□ 1.15
HMGXB4-203ENST00000420166 SASS6Q6UVJ0 657 aa22.21■■□□□ 1.15
HMGXB4-203ENST00000420166 C15orf39Q6ZRI6 1047 aa22.21■■□□□ 1.15
HMGXB4-203ENST00000420166 EP400NLQ6ZTU2 488 aa22.21■■□□□ 1.15
HMGXB4-203ENST00000420166 SV2AQ7L0J3 742 aa22.21■■□□□ 1.15
HMGXB4-203ENST00000420166 GLYCTKQ8IVS8 523 aa22.21■■□□□ 1.15
HMGXB4-203ENST00000420166 GDAP2Q9NXN4 497 aa22.21■■□□□ 1.15
HMGXB4-203ENST00000420166 ARMCX3Q9UH62 379 aaPredicted RBP22.21■■□□□ 1.15
HMGXB4-203ENST00000420166 ADAM12O43184 909 aa22.2■■□□□ 1.14
HMGXB4-203ENST00000420166 TBC1D4O60343 1298 aa22.2■■□□□ 1.14
HMGXB4-203ENST00000420166 TBX10O75333 385 aa22.2■■□□□ 1.14
HMGXB4-203ENST00000420166 OAZ2O95190 189 aa22.2■■□□□ 1.14
HMGXB4-203ENST00000420166 LTBRP36941 435 aa22.2■■□□□ 1.14
HMGXB4-203ENST00000420166 CLCN4P51793 760 aa22.2■■□□□ 1.14
HMGXB4-203ENST00000420166 YWHAHQ04917 246 aaPredicted RBP22.2■■□□□ 1.14
HMGXB4-203ENST00000420166 PPP3CAQ08209 521 aa22.2■■□□□ 1.14
HMGXB4-203ENST00000420166 CCDC40Q4G0X9 1142 aa22.2■■□□□ 1.14
HMGXB4-203ENST00000420166 CTXN3Q4LDR2 81 aa22.2■■□□□ 1.14
HMGXB4-203ENST00000420166 ZNF280DQ6N043 979 aa22.2■■□□□ 1.14
HMGXB4-203ENST00000420166 TMEM184AQ6ZMB5 413 aa22.2■■□□□ 1.14
HMGXB4-203ENST00000420166 FRMD5Q7Z6J6 570 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms