RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 ARMCX5Q6P1M9 558 aa22.33■■□□□ 1.17
PKNOX1-202ENST00000418336 NT5DC4Q86YG4 428 aa22.33■■□□□ 1.17
PKNOX1-202ENST00000418336 CBWD2Q8IUF1 395 aa22.33■■□□□ 1.17
PKNOX1-202ENST00000418336 GPD1LQ8N335 351 aa22.33■■□□□ 1.17
PKNOX1-202ENST00000418336 C1orf127Q8N9H9 656 aa22.33■■□□□ 1.17
PKNOX1-202ENST00000418336 ZNF461Q8TAF7 563 aa22.33■■□□□ 1.17
PKNOX1-202ENST00000418336 SMG7Q92540 1137 aaKnown RBP22.33■■□□□ 1.17
PKNOX1-202ENST00000418336 C1QTNF1Q9BXJ1 281 aa22.33■■□□□ 1.17
PKNOX1-202ENST00000418336 PDE11AQ9HCR9 933 aa22.33■■□□□ 1.17
PKNOX1-202ENST00000418336 DPP3Q9NY33 737 aa22.33■■□□□ 1.17
PKNOX1-202ENST00000418336 RBAKQ9NYW8 714 aaPredicted RBP22.33■■□□□ 1.17
PKNOX1-202ENST00000418336 HSPBP1Q9NZL4 362 aa22.33■■□□□ 1.17
PKNOX1-202ENST00000418336 TIMM13Q9Y5L4 95 aaPredicted RBP22.33■■□□□ 1.17
PKNOX1-202ENST00000418336 CLUHO75153 1309 aa22.32■■□□□ 1.16
PKNOX1-202ENST00000418336 FAM86C2PA6NEL3 165 aa22.32■■□□□ 1.16
PKNOX1-202ENST00000418336 KIAA0391O15091 583 aaKnown RBP22.32■■□□□ 1.16
PKNOX1-202ENST00000418336 SEC24AO95486 1093 aa22.32■■□□□ 1.16
PKNOX1-202ENST00000418336 CYP11A1P05108 521 aa22.32■■□□□ 1.16
PKNOX1-202ENST00000418336 ALADP13716 330 aa22.32■■□□□ 1.16
PKNOX1-202ENST00000418336 TYMPP19971 482 aa22.32■■□□□ 1.16
PKNOX1-202ENST00000418336 DPYDQ12882 1025 aa22.32■■□□□ 1.16
PKNOX1-202ENST00000418336 C12orf56Q8IXR9 622 aa22.32■■□□□ 1.16
PKNOX1-202ENST00000418336 FSIP1Q8NA03 581 aa22.32■■□□□ 1.16
PKNOX1-202ENST00000418336 SLC7A14Q8TBB6 771 aa22.32■■□□□ 1.16
PKNOX1-202ENST00000418336 RTP3Q9BQQ7 232 aa22.32■■□□□ 1.16
PKNOX1-202ENST00000418336 NR2E1Q9Y466 385 aa22.32■■□□□ 1.16
PKNOX1-202ENST00000418336 MYO10Q9HD67 2058 aa22.31■■□□□ 1.16
PKNOX1-202ENST00000418336 ARHGEF37A1IGU5 675 aa22.31■■□□□ 1.16
PKNOX1-202ENST00000418336 MYL1P05976 194 aa22.31■■□□□ 1.16
PKNOX1-202ENST00000418336 HNRNPA1P09651 372 aaKnown RBP eCLIP22.31■■□□□ 1.16
PKNOX1-202ENST00000418336 ATF2P15336 505 aa22.31■■□□□ 1.16
PKNOX1-202ENST00000418336 PTPN21Q16825 1174 aa22.31■■□□□ 1.16
PKNOX1-202ENST00000418336 UVSSAQ2YD98 709 aa22.31■■□□□ 1.16
PKNOX1-202ENST00000418336 CTXN3Q4LDR2 81 aa22.31■■□□□ 1.16
PKNOX1-202ENST00000418336 KRBA2Q6ZNG9 492 aa22.31■■□□□ 1.16
PKNOX1-202ENST00000418336 CCDC149Q6ZUS6 474 aa22.31■■□□□ 1.16
PKNOX1-202ENST00000418336 STXBP4Q6ZWJ1 553 aa22.31■■□□□ 1.16
PKNOX1-202ENST00000418336 NELFCDQ8IXH7 590 aa22.31■■□□□ 1.16
PKNOX1-202ENST00000418336 APPL2Q8NEU8 664 aa22.31■■□□□ 1.16
PKNOX1-202ENST00000418336 ENGASEQ8NFI3 743 aa22.31■■□□□ 1.16
PKNOX1-202ENST00000418336 TMEM174Q8WUU8 243 aa22.31■■□□□ 1.16
PKNOX1-202ENST00000418336 EDAQ92838 391 aa22.31■■□□□ 1.16
PKNOX1-202ENST00000418336 SENP8Q96LD8 212 aa22.31■■□□□ 1.16
PKNOX1-202ENST00000418336 LRFN3Q9BTN0 628 aa22.31■■□□□ 1.16
PKNOX1-202ENST00000418336 TSHZ2Q9NRE2 1034 aa22.31■■□□□ 1.16
PKNOX1-202ENST00000418336 SIX4Q9UIU6 781 aa22.31■■□□□ 1.16
PKNOX1-202ENST00000418336 H7C4K7 107 aa22.3■■□□□ 1.16
PKNOX1-202ENST00000418336 SNRPFP62306 86 aaKnown RBP22.3■■□□□ 1.16
PKNOX1-202ENST00000418336 ZXDAP98168 799 aa22.3■■□□□ 1.16
PKNOX1-202ENST00000418336 SNW1Q13573 536 aaKnown RBP22.3■■□□□ 1.16
PKNOX1-202ENST00000418336 POTEHQ6S545 545 aa22.3■■□□□ 1.16
PKNOX1-202ENST00000418336 RTL10Q7L3V2 364 aa22.3■■□□□ 1.16
PKNOX1-202ENST00000418336 FMR1NBQ8N0W7 255 aaPredicted RBP22.3■■□□□ 1.16
PKNOX1-202ENST00000418336 OR5B17Q8NGF7 314 aa22.3■■□□□ 1.16
PKNOX1-202ENST00000418336 MYADMQ96S97 322 aa22.3■■□□□ 1.16
PKNOX1-202ENST00000418336 KCTD10Q9H3F6 313 aa22.3■■□□□ 1.16
PKNOX1-202ENST00000418336 NRG2O14511 850 aaPredicted RBP22.29■■□□□ 1.16
PKNOX1-202ENST00000418336 CLIC2O15247 247 aa22.29■■□□□ 1.16
PKNOX1-202ENST00000418336 ZNF202O95125 648 aa22.29■■□□□ 1.16
PKNOX1-202ENST00000418336 PAX3P23760 479 aa22.29■■□□□ 1.16
PKNOX1-202ENST00000418336 NTHL1P78549 312 aa22.29■■□□□ 1.16
PKNOX1-202ENST00000418336 YWHAHQ04917 246 aaPredicted RBP22.29■■□□□ 1.16
PKNOX1-202ENST00000418336 KNOP1Q1ED39 458 aaKnown RBP22.29■■□□□ 1.16
PKNOX1-202ENST00000418336 ZNF280DQ6N043 979 aa22.29■■□□□ 1.16
PKNOX1-202ENST00000418336 ELMSAN1Q6PJG2 1045 aa22.29■■□□□ 1.16
PKNOX1-202ENST00000418336 RNF19BQ6ZMZ0 732 aa22.29■■□□□ 1.16
PKNOX1-202ENST00000418336 TCEAL8Q8IYN2 117 aa22.29■■□□□ 1.16
PKNOX1-202ENST00000418336 TDRD5Q8NAT2 981 aaKnown RBP22.29■■□□□ 1.16
PKNOX1-202ENST00000418336 OR10T2Q8NGX3 314 aa22.29■■□□□ 1.16
PKNOX1-202ENST00000418336 TMEM209Q96SK2 561 aa22.29■■□□□ 1.16
PKNOX1-202ENST00000418336 CRISPLD1Q9H336 500 aa22.29■■□□□ 1.16
PKNOX1-202ENST00000418336 SMOC2Q9H3U7 446 aa22.29■■□□□ 1.16
PKNOX1-202ENST00000418336 SPDYE4A6NLX3 237 aa22.28■■□□□ 1.16
PKNOX1-202ENST00000418336 CCL16O15467 120 aa22.28■■□□□ 1.16
PKNOX1-202ENST00000418336 RHOBTB3O94955 611 aa22.28■■□□□ 1.16
PKNOX1-202ENST00000418336 RPN1P04843 607 aaKnown RBP22.28■■□□□ 1.16
PKNOX1-202ENST00000418336 OR4Q2P0C623 313 aa22.28■■□□□ 1.16
PKNOX1-202ENST00000418336 TAF6P49848 677 aa22.28■■□□□ 1.16
PKNOX1-202ENST00000418336 PSMD2Q13200 908 aa22.28■■□□□ 1.16
PKNOX1-202ENST00000418336 PPM1LQ5SGD2 360 aa22.28■■□□□ 1.16
PKNOX1-202ENST00000418336 LIN9Q5TKA1 542 aa22.28■■□□□ 1.16
PKNOX1-202ENST00000418336 TPGS2Q68CL5 300 aa22.28■■□□□ 1.16
PKNOX1-202ENST00000418336 LMBRD2Q68DH5 695 aaPredicted RBP22.28■■□□□ 1.16
PKNOX1-202ENST00000418336 DSTYKQ6XUX3 929 aa22.28■■□□□ 1.16
PKNOX1-202ENST00000418336 GRASPQ7Z6J2 395 aaPredicted RBP22.28■■□□□ 1.16
PKNOX1-202ENST00000418336 PLEKHO2Q8TD55 490 aa22.28■■□□□ 1.16
PKNOX1-202ENST00000418336 ASIC4Q96FT7 647 aa22.28■■□□□ 1.16
PKNOX1-202ENST00000418336 DMAC2Q9NW81 257 aa22.28■■□□□ 1.16
PKNOX1-202ENST00000418336 HCFC1R1Q9NWW0 138 aa22.28■■□□□ 1.16
PKNOX1-202ENST00000418336 EPS15L1Q9UBC2 864 aa22.28■■□□□ 1.16
PKNOX1-202ENST00000418336 DNMT3BQ9UBC3 853 aaKnown RBP22.28■■□□□ 1.16
PKNOX1-202ENST00000418336 AFF4Q9UHB7 1163 aaKnown RBP22.28■■□□□ 1.16
PKNOX1-202ENST00000418336 ASGR2P07307 311 aa22.27■■□□□ 1.16
PKNOX1-202ENST00000418336 TFAMQ00059 246 aaKnown RBP22.27■■□□□ 1.16
PKNOX1-202ENST00000418336 TMEM31Q5JXX7 168 aa22.27■■□□□ 1.16
PKNOX1-202ENST00000418336 LIMS2Q7Z4I7 341 aa22.27■■□□□ 1.16
PKNOX1-202ENST00000418336 MTMR12Q9C0I1 747 aa22.27■■□□□ 1.16
PKNOX1-202ENST00000418336 INTS13Q9NVM9 706 aa22.27■■□□□ 1.16
PKNOX1-202ENST00000418336 LIMD1Q9UGP4 676 aa22.27■■□□□ 1.16
PKNOX1-202ENST00000418336 ZNF233A6NK53 670 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms