RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 NUDCD1Q96RS6 583 aa13.97□□□□□ -0.17
TNFRSF8-203ENST00000417814 MYLK2Q9H1R3 596 aa13.97□□□□□ -0.17
TNFRSF8-203ENST00000417814 PACSIN3Q9UKS6 424 aa13.97□□□□□ -0.17
TNFRSF8-203ENST00000417814 AGO2Q9UKV8 859 aaKnown RBP13.97□□□□□ -0.17
TNFRSF8-203ENST00000417814 H7C0C1 242 aa13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 ADRA1DP25100 572 aa13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 TNFSF9P41273 254 aa13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 ATP5OP48047 213 aa13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 COPS2P61201 443 aa13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 KDSRQ06136 332 aa13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 MIS18BP1Q6P0N0 1132 aa13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 ARHGEF18Q6ZSZ5 1173 aa13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 HACE1Q8IYU2 909 aa13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 ANKRD35Q8N283 1001 aa13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 CEP120Q8N960 986 aa13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 RBBP8NLQ8NC74 664 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 UBA3Q8TBC4 463 aa13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 SYTL5Q8TDW5 730 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 ZNF317Q96PQ6 595 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 PHTF1Q9UMS5 762 aa13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 DOT1LQ8TEK3 1739 aa13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 NCALDP61601 193 aa13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 C1orf220Q5T0J3 134 aa13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 C3orf62Q6ZUJ4 267 aa13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 PPM1NQ8N819 430 aa13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 CEP41Q9BYV8 373 aa13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 MTMR12Q9C0I1 747 aa13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 MCM8Q9UJA3 840 aa13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 ZMYND8Q9ULU4 1186 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF8-203ENST00000417814 FRMPD4Q14CM0 1322 aa13.96□□□□□ -0.18
TNFRSF8-203ENST00000417814 NR3C2P08235 984 aa13.96□□□□□ -0.18
TNFRSF8-203ENST00000417814 SLC8A1P32418 973 aa13.96□□□□□ -0.18
TNFRSF8-203ENST00000417814 KIF22Q14807 665 aa13.96□□□□□ -0.18
TNFRSF8-203ENST00000417814 FAM43BQ6ZT52 329 aaPredicted RBP13.96□□□□□ -0.18
TNFRSF8-203ENST00000417814 C7orf31Q8N865 590 aa13.96□□□□□ -0.18
TNFRSF8-203ENST00000417814 LMO3Q8TAP4 145 aa13.96□□□□□ -0.18
TNFRSF8-203ENST00000417814 ZNF395Q9H8N7 513 aaPredicted RBP13.96□□□□□ -0.18
TNFRSF8-203ENST00000417814 PCDHA3Q9Y5H8 950 aa13.96□□□□□ -0.18
TNFRSF8-203ENST00000417814 ADGRA3Q8IWK6 1321 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 TIAM2Q8IVF5 1701 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 A0A0A6YYK5 440 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 WDR64B1ANS9 1081 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 FAM155BO75949 473 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 PSMA2P25787 234 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 PSMC5P62195 406 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 PRKCEQ02156 737 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 BMPR2Q13873 1038 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 TAF5Q15542 800 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 MUM1Q2TAK8 710 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 VSTM1Q6UX27 236 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 LRRC6Q86X45 466 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 MCOLN2Q8IZK6 566 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 TLCD1Q96CP7 247 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 DCLK3Q9C098 648 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 FBXO6Q9NRD1 293 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 ARL2BPQ9Y2Y0 163 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 TTLL13PA6NNM8 815 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 CST8O60676 142 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 PHKA2P46019 1235 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 FSTL1Q12841 308 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 NPNTQ6UXI9 565 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 CCDC124Q96CT7 223 aaKnown RBP13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 GMCL1Q96IK5 515 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 APOL6Q9BWW8 343 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 OSBPL1AQ9BXW6 950 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 SMYD3Q9H7B4 428 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 NGRNQ9NPE2 291 aaKnown RBP13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 AAASQ9NRG9 546 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 TMX2Q9Y320 296 aa13.95□□□□□ -0.18
TNFRSF8-203ENST00000417814 ATP2A1O14983 1001 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 CST3P01034 146 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 VIL1P09327 827 aaKnown RBP13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 CNTN2Q02246 1040 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 SLC1A5Q15758 541 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 ANKRD20A3Q5VUR7 823 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 GPD1LQ8N335 351 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 TTC1Q99614 292 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 AGO4Q9HCK5 861 aaKnown RBP13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 NOCTQ9UK39 431 aaKnown RBP13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 ZNF862O60290 1169 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 ALDH3A1P30838 453 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 CAP2P40123 477 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 EN1Q05925 392 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 NFX1Q12986 1120 aaKnown RBP13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 AMHR2Q16671 573 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 PREPLQ4J6C6 727 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 TAF1BQ53T94 588 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 GPAT2Q6NUI2 795 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 ECHDC2Q86YB7 292 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 CCDC60Q8IWA6 550 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 FAM71AQ8IYT1 594 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 RUBCNQ92622 972 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 KIAA1683Q9H0B3 1180 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 NOP53Q9NZM5 478 aaKnown RBP13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 SEL1LQ9UBV2 794 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 TTLL3Q9Y4R7 772 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 USP54Q70EL1 1684 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 CD48P09326 243 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 SESTD1Q86VW0 696 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms