RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 TAF11Q15544 211 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 FSCBQ5H9T9 825 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 TADA2BQ86TJ2 420 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 AGBL3Q8NEM8 1001 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 ENTPD7Q9NQZ7 604 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 FAF1Q9UNN5 650 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-203ENST00000416123 DOLKQ9UPQ8 538 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 HNRNPCL2B2RXH8 293 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 HNRNPCL1O60812 293 aaKnown RBP11.17□□□□□ -0.62
COL12A1-203ENST00000416123 CCDC124Q96CT7 223 aaKnown RBP11.17□□□□□ -0.62
COL12A1-203ENST00000416123 TRIM54Q9BYV2 358 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 ADGRA2Q96PE1 1338 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 MAP3K6O95382 1288 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 TXNRD3Q86VQ6 643 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 FBXO41Q8TF61 875 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 POP1Q99575 1024 aaKnown RBP11.17□□□□□ -0.62
COL12A1-203ENST00000416123 SLC38A7Q9NVC3 462 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 ANGPTL2Q9UKU9 493 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 A0A1W2PQC6 194 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 DDNO94850 711 aaPredicted RBP11.16□□□□□ -0.62
COL12A1-203ENST00000416123 MTMR12Q9C0I1 747 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 DBR1Q9UK59 544 aaKnown RBP11.16□□□□□ -0.62
COL12A1-203ENST00000416123 LMTK2Q8IWU2 1503 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 CLCN3P51790 818 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 C2CD6Q53TS8 623 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 ACBD5Q5T8D3 534 aaPredicted RBP11.16□□□□□ -0.62
COL12A1-203ENST00000416123 MFN1Q8IWA4 741 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 ZFATQ9P243 1243 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 PPP3CCP48454 512 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 PPP2R2AP63151 447 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 SLC18A3Q16572 532 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 LY6KQ17RY6 165 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 ADSSL1Q8N142 457 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 TMEM8AQ9HCN3 771 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 RHOBTB3O94955 611 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 MDM2Q00987 491 aaPredicted RBP11.16□□□□□ -0.62
COL12A1-203ENST00000416123 PIGHQ14442 188 aaPredicted RBP11.16□□□□□ -0.62
COL12A1-203ENST00000416123 ASAP3Q8TDY4 903 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.16□□□□□ -0.62
COL12A1-203ENST00000416123 HPS5Q9UPZ3 1129 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 LUC7L3O95232 432 aaKnown RBP11.16□□□□□ -0.62
COL12A1-203ENST00000416123 ARP10275 920 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 PTK2BQ14289 1009 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 C1orf146Q5VVC0 180 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 DEFB128Q7Z7B8 93 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 IPMKQ8NFU5 416 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 SLC26A7Q8TE54 656 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 POLR3CQ9BUI4 534 aaPredicted RBP11.16□□□□□ -0.62
COL12A1-203ENST00000416123 ZC3H11AO75152 810 aaKnown RBP eCLIP11.16□□□□□ -0.62
COL12A1-203ENST00000416123 SRGNP10124 158 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 LONRF1Q17RB8 773 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 SPATA4Q8NEY3 305 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 SPATA18Q8TC71 538 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 ELMO3Q96BJ8 720 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 DNAJC5Q9H3Z4 198 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 ALDH18A1P54886 795 aaKnown RBP11.16□□□□□ -0.62
COL12A1-203ENST00000416123 BACE1P56817 501 aa11.16□□□□□ -0.62
COL12A1-203ENST00000416123 FXR1P51114 621 aaKnown RBP eCLIP11.15□□□□□ -0.62
COL12A1-203ENST00000416123 SOX10P56693 466 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 GTF2H3Q13889 308 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 MRFAP1Q9Y605 127 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 LRG1P02750 347 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 RPA1P27694 616 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 HARS2P49590 506 aaKnown RBP11.15□□□□□ -0.62
COL12A1-203ENST00000416123 KCNV2Q8TDN2 545 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 GLT1D1Q96MS3 346 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 LRRC37BQ96QE4 947 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 C3orf70A6NLC5 250 aaPredicted RBP11.15□□□□□ -0.62
COL12A1-203ENST00000416123 KCNA2P16389 499 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 VCAM1P19320 739 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 GUCY2CP25092 1073 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 SLC1A1P43005 524 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 ADGRA1Q86SQ6 560 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 ZDHHC15Q96MV8 337 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 HPS4Q9NQG7 708 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 FAM200BP0CF97 657 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 NR1I3Q14994 352 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 TBCCQ15814 346 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 TBX3O15119 743 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 STMN1P16949 149 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 RGS2P41220 211 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 ESRRGP62508 458 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 C11orf96Q7Z7L8 435 aa11.15□□□□□ -0.62
COL12A1-203ENST00000416123 C20orf96Q9NUD7 363 aaPredicted RBP11.15□□□□□ -0.62
COL12A1-203ENST00000416123 NRXN1Q9ULB1 1477 aa11.15□□□□□ -0.63
COL12A1-203ENST00000416123 MED24O75448 989 aa11.15□□□□□ -0.63
COL12A1-203ENST00000416123 NDUFS3O75489 264 aa11.15□□□□□ -0.63
COL12A1-203ENST00000416123 B3GAT3O94766 335 aa11.15□□□□□ -0.63
COL12A1-203ENST00000416123 FXR2P51116 673 aaKnown RBP eCLIP11.15□□□□□ -0.63
COL12A1-203ENST00000416123 ATL2Q8NHH9 583 aa11.15□□□□□ -0.63
COL12A1-203ENST00000416123 MORC4Q8TE76 937 aa11.15□□□□□ -0.63
COL12A1-203ENST00000416123 TRIM4Q9C037 500 aa11.15□□□□□ -0.63
COL12A1-203ENST00000416123 KCNQ5Q9NR82 932 aa11.15□□□□□ -0.63
COL12A1-203ENST00000416123 PRMT7Q9NVM4 692 aaPredicted RBP11.15□□□□□ -0.63
COL12A1-203ENST00000416123 DEPDC5O75140 1603 aa11.15□□□□□ -0.63
COL12A1-203ENST00000416123 DDTLA6NHG4 134 aaPredicted RBP11.14□□□□□ -0.63
COL12A1-203ENST00000416123 EIF4E1BA6NMX2 242 aaKnown RBP11.14□□□□□ -0.63
COL12A1-203ENST00000416123 PTPRN2Q92932 1015 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 ERLEC1Q96DZ1 483 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 ADAMTS13Q76LX8 1427 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms