RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 ATP5HO75947 161 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 RRM1P23921 792 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 MSH2P43246 934 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 IL9RQ01113 521 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 ZYXQ15942 572 aaKnown RBP10.39□□□□□ -0.75
CD44-206ENST00000415148 RSBN1LQ6PCB5 846 aaPredicted RBP10.39□□□□□ -0.75
CD44-206ENST00000415148 DRICH1Q6PGQ1 229 aaPredicted RBP10.39□□□□□ -0.75
CD44-206ENST00000415148 MON1BQ7L1V2 547 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 ZCCHC9Q8N567 271 aaKnown RBP10.39□□□□□ -0.75
CD44-206ENST00000415148 LPAR1Q92633 364 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 KCNN1Q92952 543 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 CFAP57Q96MR6 1250 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 TTC25Q96NG3 672 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 TMEM237Q96Q45 408 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 SCINQ9Y6U3 715 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 NFASCO94856 1347 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 TMEM150BA6NC51 233 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 MAP3K13O43283 966 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 RALAP11233 206 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 CCNB1P14635 433 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 GM2AP17900 193 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 KLRC2P26717 231 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 PSMD6Q15008 389 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 ANO5Q75V66 913 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 TRMT1LQ7Z2T5 733 aaKnown RBP10.38□□□□□ -0.75
CD44-206ENST00000415148 PHF13Q86YI8 300 aaPredicted RBP10.38□□□□□ -0.75
CD44-206ENST00000415148 SRRM1Q8IYB3 904 aaKnown RBP10.38□□□□□ -0.75
CD44-206ENST00000415148 MCPH1Q8NEM0 835 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 CPA5Q8WXQ8 436 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 MAML1Q92585 1016 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 RSRC1Q96IZ7 334 aaKnown RBP10.38□□□□□ -0.75
CD44-206ENST00000415148 TAAR1Q96RJ0 339 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 OSBPL8Q9BZF1 889 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 TOPORSQ9NS56 1045 aaPredicted RBP10.38□□□□□ -0.75
CD44-206ENST00000415148 SENP1Q9P0U3 644 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.38□□□□□ -0.75
CD44-206ENST00000415148 PCDHA10Q9Y5I2 948 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 UMODL1Q5DID0 1318 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 CLRN2A0PK11 232 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 PLSCR1O15162 318 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 PRPF4O43172 522 aaKnown RBP eCLIP10.38□□□□□ -0.75
CD44-206ENST00000415148 EXTL3O43909 919 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 SPAG7O75391 227 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 CCNE2O96020 404 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 FDX1P10109 184 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 TAC1P20366 129 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 MAGEA4P43358 317 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 WDR4P57081 412 aaKnown RBP10.38□□□□□ -0.75
CD44-206ENST00000415148 SLC8A3P57103 927 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 RASA2Q15283 850 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 IZUMO3Q5VZ72 239 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 SMYD5Q6GMV2 418 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 PLEKHA7Q6IQ23 1121 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 RGS9BPQ6ZS82 235 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 KRT27Q7Z3Y8 459 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 RCOR2Q8IZ40 523 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 MTMR14Q8NCE2 650 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 C9orf72Q96LT7 481 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 GMLQ99445 158 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 TRIM6Q9C030 488 aaPredicted RBP10.38□□□□□ -0.75
CD44-206ENST00000415148 MYLK2Q9H1R3 596 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 KIF9Q9HAQ2 790 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 SLC38A10Q9HBR0 1119 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 PDLIM7Q9NR12 457 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 NOP53Q9NZM5 478 aaKnown RBP10.38□□□□□ -0.75
CD44-206ENST00000415148 GRID1Q9ULK0 1009 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 CNTN6Q9UQ52 1028 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 DRG1Q9Y295 367 aaKnown RBP10.38□□□□□ -0.75
CD44-206ENST00000415148 STARD13Q9Y3M8 1113 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 NUMBLQ9Y6R0 609 aa10.38□□□□□ -0.75
CD44-206ENST00000415148 FAM47DPA6NHR8 397 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 ATP9AO75110 1047 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 DGAT1O75907 488 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 WFS1O76024 890 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 C4BPAP04003 597 aaKnown RBP10.37□□□□□ -0.75
CD44-206ENST00000415148 C1QBPQ07021 282 aaKnown RBP10.37□□□□□ -0.75
CD44-206ENST00000415148 ZACNQ401N2 412 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 HP1BP3Q5SSJ5 553 aaPredicted RBP10.37□□□□□ -0.75
CD44-206ENST00000415148 PLA2G4FQ68DD2 849 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 ABRAQ8N0Z2 381 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 ZNF516Q92618 1163 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 ATP6V0A1Q93050 837 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 SPDL1Q96EA4 605 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 PDCD2LQ9BRP1 358 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 HEMGNQ9BXL5 484 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 PITPNM3Q9BZ71 974 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 SLCO1B3Q9NPD5 702 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 BATF3Q9NR55 127 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 PXMP2Q9NR77 195 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 RPS6P62753 249 aaKnown RBP10.37□□□□□ -0.75
CD44-206ENST00000415148 MAMLD1Q13495 774 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 CCDC142Q17RM4 750 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 SPDYAQ5MJ70 313 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 ANKRD20A2Q5SQ80 823 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 ANKRD20A1Q5TYW2 823 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 LRRC38Q5VT99 294 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 ANKRD20A3Q5VUR7 823 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 SAMD1Q6SPF0 538 aaPredicted RBP10.37□□□□□ -0.75
CD44-206ENST00000415148 BSNDQ8WZ55 320 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 GPRASP2Q96D09 838 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms