RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 PTPN14Q15678 1187 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 CCDC40Q4G0X9 1142 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 CDKAL1Q5VV42 579 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 LMBRD2Q68DH5 695 aaPredicted RBP12.84□□□□□ -0.35
ATG4B-207ENST00000415107 VPS52Q8N1B4 723 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 PPP2R3CQ969Q6 453 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 EEF2KMTQ96G04 330 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 CNOT6LQ96LI5 555 aaKnown RBP12.84□□□□□ -0.35
ATG4B-207ENST00000415107 POP1Q99575 1024 aaKnown RBP12.84□□□□□ -0.35
ATG4B-207ENST00000415107 CDCA3Q99618 268 aaPredicted RBP12.84□□□□□ -0.35
ATG4B-207ENST00000415107 CDX2Q99626 313 aaPredicted RBP12.84□□□□□ -0.35
ATG4B-207ENST00000415107 TCF25Q9BQ70 676 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 TTPALQ9BTX7 342 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 XYLT2Q9H1B5 865 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 DNAJC25Q9H1X3 360 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 FAM124BQ9H5Z6 455 aaPredicted RBP12.84□□□□□ -0.35
ATG4B-207ENST00000415107 FNIP2Q9P278 1114 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 DSEQ9UL01 958 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 PCDHB8Q9UN66 801 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 NFE2L3Q9Y4A8 694 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 NUB1Q9Y5A7 615 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 BACE2Q9Y5Z0 518 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 KPNA7A9QM74 516 aa12.83□□□□□ -0.36
ATG4B-207ENST00000415107 PPEF2O14830 753 aa12.83□□□□□ -0.36
ATG4B-207ENST00000415107 TBC1D4O60343 1298 aa12.83□□□□□ -0.36
ATG4B-207ENST00000415107 ASS1P00966 412 aaKnown RBP12.83□□□□□ -0.36
ATG4B-207ENST00000415107 TRIM49P0CI25 452 aa12.83□□□□□ -0.36
ATG4B-207ENST00000415107 TRIM49CP0CI26 452 aa12.83□□□□□ -0.36
ATG4B-207ENST00000415107 ODC1P11926 461 aa12.83□□□□□ -0.36
ATG4B-207ENST00000415107 ERVFC1P60507 584 aa12.83□□□□□ -0.36
ATG4B-207ENST00000415107 NCOA4Q13772 614 aa12.83□□□□□ -0.36
ATG4B-207ENST00000415107 ANO6Q4KMQ2 910 aa12.83□□□□□ -0.36
ATG4B-207ENST00000415107 ANKS3Q6ZW76 656 aa12.83□□□□□ -0.36
ATG4B-207ENST00000415107 Q7L0L9 218 aa12.83□□□□□ -0.36
ATG4B-207ENST00000415107 TOP6BLQ8N6T0 577 aa12.83□□□□□ -0.36
ATG4B-207ENST00000415107 MRPL43Q8N983 215 aaKnown RBP12.83□□□□□ -0.36
ATG4B-207ENST00000415107 APPL2Q8NEU8 664 aa12.83□□□□□ -0.36
ATG4B-207ENST00000415107 NSUN3Q9H649 340 aaKnown RBP12.83□□□□□ -0.36
ATG4B-207ENST00000415107 AGAP1Q9UPQ3 857 aa12.83□□□□□ -0.36
ATG4B-207ENST00000415107 GTPBP10A4D1E9 387 aaKnown RBP12.82□□□□□ -0.36
ATG4B-207ENST00000415107 C2orf71A6NGG8 1288 aa12.82□□□□□ -0.36
ATG4B-207ENST00000415107 RFXAPO00287 272 aa12.82□□□□□ -0.36
ATG4B-207ENST00000415107 SPTLC1O15269 473 aa12.82□□□□□ -0.36
ATG4B-207ENST00000415107 NCK2O43639 380 aa12.82□□□□□ -0.36
ATG4B-207ENST00000415107 OAZ2O95190 189 aa12.82□□□□□ -0.36
ATG4B-207ENST00000415107 VNN1O95497 513 aa12.82□□□□□ -0.36
ATG4B-207ENST00000415107 CST3P01034 146 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-207ENST00000415107 ZNF18P17022 549 aa12.82□□□□□ -0.36
ATG4B-207ENST00000415107 IGFBP6P24592 240 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-207ENST00000415107 IRS1P35568 1242 aa12.82□□□□□ -0.36
ATG4B-207ENST00000415107 BRCC3P46736 316 aa12.82□□□□□ -0.36
ATG4B-207ENST00000415107 FMO5P49326 533 aa12.82□□□□□ -0.36
ATG4B-207ENST00000415107 TPD52L1Q16890 204 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-207ENST00000415107 SGSM1Q2NKQ1 1148 aa12.82□□□□□ -0.36
ATG4B-207ENST00000415107 RTP2Q5QGT7 225 aa12.82□□□□□ -0.36
ATG4B-207ENST00000415107 FAM171A1Q5VUB5 890 aa12.82□□□□□ -0.36
ATG4B-207ENST00000415107 TMC7Q7Z402 723 aa12.82□□□□□ -0.36
ATG4B-207ENST00000415107 TMEM86AQ8N2M4 240 aa12.82□□□□□ -0.36
ATG4B-207ENST00000415107 FBXL13Q8NEE6 735 aa12.82□□□□□ -0.36
ATG4B-207ENST00000415107 LNX1Q8TBB1 728 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-207ENST00000415107 HASPINQ8TF76 798 aa12.82□□□□□ -0.36
ATG4B-207ENST00000415107 HPDLQ96IR7 371 aa12.82□□□□□ -0.36
ATG4B-207ENST00000415107 SENP8Q96LD8 212 aa12.82□□□□□ -0.36
ATG4B-207ENST00000415107 ENTPD7Q9NQZ7 604 aa12.82□□□□□ -0.36
ATG4B-207ENST00000415107 MRPL17Q9NRX2 175 aaKnown RBP12.82□□□□□ -0.36
ATG4B-207ENST00000415107 MTRRQ9UBK8 725 aa12.82□□□□□ -0.36
ATG4B-207ENST00000415107 R3HCC1Q9Y3T6 440 aaKnown RBP12.82□□□□□ -0.36
ATG4B-207ENST00000415107 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.82□□□□□ -0.36
ATG4B-207ENST00000415107 MYO9BQ13459 2157 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 LRRC10BA6NIK2 292 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 SMTNL1A8MU46 457 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 H7C4K7 107 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 TACC1O75410 805 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 PAPLNO95428 1278 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 KRT19P08727 400 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 TKTP29401 623 aaKnown RBP12.81□□□□□ -0.36
ATG4B-207ENST00000415107 GCLMP48507 274 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 ZNF165P49910 485 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 ZNF445P59923 1031 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 BIRC3Q13489 604 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 TRPC3Q13507 836 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 KCNC3Q14003 757 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 IQCB1Q15051 598 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 MAN2A1Q16706 1144 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 CBWD6Q4V339 395 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 TCP11X2Q5H9J9 407 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 DCAF17Q5H9S7 520 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-207ENST00000415107 CBWD3Q5JTY5 395 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 CBWD5Q5RIA9 395 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 SLC8B1Q6J4K2 584 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 ZNF280DQ6N043 979 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 TAS1R2Q8TE23 839 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 RABGGTAQ92696 567 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 IMPG2Q9BZV3 1241 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 HSD3B7Q9H2F3 369 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 STXBP5LQ9Y2K9 1186 aa12.81□□□□□ -0.36
ATG4B-207ENST00000415107 PRRC2BQ5JSZ5 2229 aaKnown RBP12.8□□□□□ -0.36
ATG4B-207ENST00000415107 KCNJ18B7U540 433 aa12.8□□□□□ -0.36
ATG4B-207ENST00000415107 CYB561D2O14569 222 aa12.8□□□□□ -0.36
ATG4B-207ENST00000415107 GABRDO14764 452 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms