RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 ACAP1Q15027 740 aa2.94□□□□□ -1.94
MCF2-204ENST00000414978 NR0B2Q15466 257 aa2.94□□□□□ -1.94
MCF2-204ENST00000414978 SLC14A2Q15849 920 aa2.94□□□□□ -1.94
MCF2-204ENST00000414978 NRN1LQ496H8 165 aa2.94□□□□□ -1.94
MCF2-204ENST00000414978 FKBP15Q5T1M5 1219 aa2.94□□□□□ -1.94
MCF2-204ENST00000414978 ANKRD45Q5TZF3 282 aa2.94□□□□□ -1.94
MCF2-204ENST00000414978 MBNL2Q5VZF2 373 aaKnown RBP2.94□□□□□ -1.94
MCF2-204ENST00000414978 APOA5Q6Q788 366 aa2.94□□□□□ -1.94
MCF2-204ENST00000414978 LRSAM1Q6UWE0 723 aa2.94□□□□□ -1.94
MCF2-204ENST00000414978 RSPH3Q86UC2 560 aa2.94□□□□□ -1.94
MCF2-204ENST00000414978 USHBP1Q8N6Y0 703 aa2.94□□□□□ -1.94
MCF2-204ENST00000414978 ZNF713Q8N859 430 aaPredicted RBP2.94□□□□□ -1.94
MCF2-204ENST00000414978 NANOS1Q8WY41 292 aaKnown RBP2.94□□□□□ -1.94
MCF2-204ENST00000414978 RPGRQ92834 1020 aaKnown RBP2.94□□□□□ -1.94
MCF2-204ENST00000414978 ZSWIM3Q96MP5 696 aa2.94□□□□□ -1.94
MCF2-204ENST00000414978 SEC62Q99442 399 aaKnown RBP2.94□□□□□ -1.94
MCF2-204ENST00000414978 CDK19Q9BWU1 502 aa2.94□□□□□ -1.94
MCF2-204ENST00000414978 SH3GLB2Q9NR46 395 aa2.94□□□□□ -1.94
MCF2-204ENST00000414978 C1GALT1Q9NS00 363 aa2.94□□□□□ -1.94
MCF2-204ENST00000414978 ERVK13-1Q9NX77 482 aa2.94□□□□□ -1.94
MCF2-204ENST00000414978 ARHGAP26Q9UNA1 814 aa2.94□□□□□ -1.94
MCF2-204ENST00000414978 ATP6V0A2Q9Y487 856 aa2.94□□□□□ -1.94
MCF2-204ENST00000414978 UBA6A0AVT1 1052 aaPredicted RBP2.93□□□□□ -1.94
MCF2-204ENST00000414978 TMEM233B4DJY2 109 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 KRIT1O00522 736 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 NPHS1O60500 1241 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 BUB1BO60566 1050 aaPredicted RBP2.93□□□□□ -1.94
MCF2-204ENST00000414978 HSD3B1P14060 373 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 CD40P25942 277 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 BMP8BP34820 402 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 TRHRP34981 398 aaPredicted RBP2.93□□□□□ -1.94
MCF2-204ENST00000414978 CD86P42081 329 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 CNGB1Q14028 1251 aaPredicted RBP2.93□□□□□ -1.94
MCF2-204ENST00000414978 SPIDRQ14159 915 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 ARL13BQ3SXY8 428 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 KHDC1LQ5JSQ8 128 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 FAAH2Q6GMR7 532 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 LZTR1Q8N653 840 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 SNX21Q969T3 373 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 C1GALT1C1Q96EU7 318 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 TMX3Q96JJ7 454 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 PTPN18Q99952 460 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 C7orf25Q9BPX7 421 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 PDCD2LQ9BRP1 358 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 C22orf23Q9BZE7 217 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 KIAA1586Q9HCI6 787 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 LMBRD1Q9NUN5 540 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 MYOTQ9UBF9 498 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 TMPRSS11EQ9UL52 423 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 FAM184BQ9ULE4 1060 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 TAF1P21675 1872 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 PCDH11XQ9BZA7 1347 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 PCDH11YQ9BZA8 1340 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 PODXLO00592 558 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 USO1O60763 962 aaKnown RBP2.93□□□□□ -1.94
MCF2-204ENST00000414978 ARIH2O95376 493 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 MSL3P1P0C860 447 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 BTF3P20290 206 aaKnown RBP2.93□□□□□ -1.94
MCF2-204ENST00000414978 RPS16P62249 146 aaKnown RBP2.93□□□□□ -1.94
MCF2-204ENST00000414978 MALLQ13021 153 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 TBX2Q13207 712 aaPredicted RBP2.93□□□□□ -1.94
MCF2-204ENST00000414978 DEFB115Q30KQ5 88 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 SLFN12LQ6IEE8 588 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 SULT6B1Q6IMI4 303 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 KCTD1Q719H9 257 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 MAEAQ7L5Y9 396 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.93□□□□□ -1.94
MCF2-204ENST00000414978 CILP2Q8IUL8 1156 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 ADGRG2Q8IZP9 1017 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 NUP43Q8NFH3 380 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 SSH3Q8TE77 659 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 CLEC4DQ8WXI8 215 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 AUTS2Q8WXX7 1259 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 SCARF2Q96GP6 870 aaPredicted RBP2.93□□□□□ -1.94
MCF2-204ENST00000414978 DBNDD2Q9BQY9 259 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 DUSP15Q9H1R2 295 aaPredicted RBP2.93□□□□□ -1.94
MCF2-204ENST00000414978 TRPV4Q9HBA0 871 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 DNAI1Q9UI46 699 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 ALPK3Q96L96 1907 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 ITIH6Q6UXX5 1313 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 TMEM82A0PJX8 343 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 IPO5O00410 1097 aaKnown RBP2.93□□□□□ -1.94
MCF2-204ENST00000414978 FOXP2O15409 715 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 RASSF9O75901 435 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 AKAP5P24588 427 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 THBS2P35442 1172 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 FOXO1Q12778 655 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 COL9A3Q14050 684 aaPredicted RBP2.93□□□□□ -1.94
MCF2-204ENST00000414978 GPR19Q15760 415 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 PFKFB4Q16877 469 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 ESPNLQ6ZVH7 1005 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 PDZD4Q76G19 769 aaPredicted RBP2.93□□□□□ -1.94
MCF2-204ENST00000414978 CHD1LQ86WJ1 897 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 SMG8Q8ND04 991 aaKnown RBP2.93□□□□□ -1.94
MCF2-204ENST00000414978 REPS2Q8NFH8 660 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 STYXQ8WUJ0 223 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 AFG1LQ8WV93 481 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 STAMQ92783 540 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 PSMG3-AS1Q96PY0 264 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 NTPCRQ9BSD7 190 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms