RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 GOLGA2P5Q9HBQ8 144 aa17.37■□□□□ 0.37
CPNE1-208ENST00000414711 PPP4R2Q9NY27 417 aa17.37■□□□□ 0.37
CPNE1-208ENST00000414711 AFF4Q9UHB7 1163 aaKnown RBP17.37■□□□□ 0.37
CPNE1-208ENST00000414711 YIPF1Q9Y548 306 aa17.37■□□□□ 0.37
CPNE1-208ENST00000414711 ASXL3Q9C0F0 2248 aa17.37■□□□□ 0.37
CPNE1-208ENST00000414711 NUP210Q8TEM1 1887 aaPredicted RBP17.37■□□□□ 0.37
CPNE1-208ENST00000414711 KALRNO60229 2985 aa17.36■□□□□ 0.37
CPNE1-208ENST00000414711 KLF18A0A0U1RQI7 1052 aa17.36■□□□□ 0.37
CPNE1-208ENST00000414711 H7C4K7 107 aa17.36■□□□□ 0.37
CPNE1-208ENST00000414711 TRDMT1O14717 391 aaKnown RBP17.36■□□□□ 0.37
CPNE1-208ENST00000414711 PLA2G2AP14555 144 aa17.36■□□□□ 0.37
CPNE1-208ENST00000414711 ENGP17813 658 aa17.36■□□□□ 0.37
CPNE1-208ENST00000414711 BCKDHBP21953 392 aa17.36■□□□□ 0.37
CPNE1-208ENST00000414711 GLRA2P23416 452 aa17.36■□□□□ 0.37
CPNE1-208ENST00000414711 FAM193AP78312 1265 aa17.36■□□□□ 0.37
CPNE1-208ENST00000414711 DMC1Q14565 340 aa17.36■□□□□ 0.37
CPNE1-208ENST00000414711 USP39Q53GS9 565 aaKnown RBP17.36■□□□□ 0.37
CPNE1-208ENST00000414711 SYT13Q7L8C5 426 aa17.36■□□□□ 0.37
CPNE1-208ENST00000414711 RPLP0P6Q8NHW5 317 aa17.36■□□□□ 0.37
CPNE1-208ENST00000414711 MDM1Q8TC05 714 aa17.36■□□□□ 0.37
CPNE1-208ENST00000414711 BPIFB1Q8TDL5 484 aa17.36■□□□□ 0.37
CPNE1-208ENST00000414711 PRIMPOLQ96LW4 560 aa17.36■□□□□ 0.37
CPNE1-208ENST00000414711 TCEANC2Q96MN5 208 aa17.36■□□□□ 0.37
CPNE1-208ENST00000414711 PPP1R10Q96QC0 940 aaKnown RBP17.36■□□□□ 0.37
CPNE1-208ENST00000414711 LRRC3Q9BY71 257 aa17.36■□□□□ 0.37
CPNE1-208ENST00000414711 SLKQ9H2G2 1235 aaPredicted RBP17.36■□□□□ 0.37
CPNE1-208ENST00000414711 RWDD1Q9H446 243 aaPredicted RBP17.36■□□□□ 0.37
CPNE1-208ENST00000414711 PDZD7Q9H5P4 517 aa17.36■□□□□ 0.37
CPNE1-208ENST00000414711 MAFFQ9ULX9 164 aa17.36■□□□□ 0.37
CPNE1-208ENST00000414711 ATG2BQ96BY7 2078 aa17.36■□□□□ 0.37
CPNE1-208ENST00000414711 THADAQ6YHU6 1953 aa17.35■□□□□ 0.37
CPNE1-208ENST00000414711 SYN3O14994 580 aa17.35■□□□□ 0.37
CPNE1-208ENST00000414711 N4BP3O15049 544 aa17.35■□□□□ 0.37
CPNE1-208ENST00000414711 ZBTB39O15060 712 aa17.35■□□□□ 0.37
CPNE1-208ENST00000414711 C1QL1O75973 258 aa17.35■□□□□ 0.37
CPNE1-208ENST00000414711 PRAMEF12O95522 483 aa17.35■□□□□ 0.37
CPNE1-208ENST00000414711 ADD1P35611 737 aaKnown RBP17.35■□□□□ 0.37
CPNE1-208ENST00000414711 ARL2P36404 184 aa17.35■□□□□ 0.37
CPNE1-208ENST00000414711 MCM2P49736 904 aa17.35■□□□□ 0.37
CPNE1-208ENST00000414711 RCAN1P53805 252 aa17.35■□□□□ 0.37
CPNE1-208ENST00000414711 CTXN3Q4LDR2 81 aa17.35■□□□□ 0.37
CPNE1-208ENST00000414711 PPP4R3CPQ6ZMV5 832 aa17.35■□□□□ 0.37
CPNE1-208ENST00000414711 NOSTRINQ8IVI9 506 aa17.35■□□□□ 0.37
CPNE1-208ENST00000414711 ACDQ96AP0 544 aa17.35■□□□□ 0.37
CPNE1-208ENST00000414711 CHFRQ96EP1 664 aa17.35■□□□□ 0.37
CPNE1-208ENST00000414711 TPSD1Q9BZJ3 242 aa17.35■□□□□ 0.37
CPNE1-208ENST00000414711 PRMT7Q9NVM4 692 aaPredicted RBP17.35■□□□□ 0.37
CPNE1-208ENST00000414711 TPCN1Q9ULQ1 816 aa17.35■□□□□ 0.37
CPNE1-208ENST00000414711 GDAQ9Y2T3 454 aa17.35■□□□□ 0.37
CPNE1-208ENST00000414711 TMEM132AQ24JP5 1023 aa17.34■□□□□ 0.37
CPNE1-208ENST00000414711 CREB3L3Q68CJ9 461 aa17.34■□□□□ 0.37
CPNE1-208ENST00000414711 HDDC3Q8N4P3 179 aa17.34■□□□□ 0.37
CPNE1-208ENST00000414711 ZNF462Q96JM2 2506 aa17.34■□□□□ 0.37
CPNE1-208ENST00000414711 UBL7Q96S82 380 aaPredicted RBP17.34■□□□□ 0.37
CPNE1-208ENST00000414711 C22orf23Q9BZE7 217 aa17.34■□□□□ 0.37
CPNE1-208ENST00000414711 THG1LQ9NWX6 298 aaKnown RBP17.34■□□□□ 0.37
CPNE1-208ENST00000414711 VPS54Q9P1Q0 977 aa17.34■□□□□ 0.37
CPNE1-208ENST00000414711 DDX25Q9UHL0 483 aaKnown RBP17.34■□□□□ 0.37
CPNE1-208ENST00000414711 NAP1L2Q9ULW6 460 aaPredicted RBP17.34■□□□□ 0.37
CPNE1-208ENST00000414711 LRRIQ4A6NIV6 560 aa17.33■□□□□ 0.36
CPNE1-208ENST00000414711 TTLL13PA6NNM8 815 aa17.33■□□□□ 0.36
CPNE1-208ENST00000414711 PRPF3O43395 683 aaKnown RBP17.33■□□□□ 0.36
CPNE1-208ENST00000414711 SLC37A4O43826 429 aa17.33■□□□□ 0.36
CPNE1-208ENST00000414711 CPB1P15086 417 aa17.33■□□□□ 0.36
CPNE1-208ENST00000414711 DRD1P21728 446 aa17.33■□□□□ 0.36
CPNE1-208ENST00000414711 PLD1Q13393 1074 aa17.33■□□□□ 0.36
CPNE1-208ENST00000414711 MRPL58Q14197 206 aaKnown RBP17.33■□□□□ 0.36
CPNE1-208ENST00000414711 FBXO43Q4G163 708 aa17.33■□□□□ 0.36
CPNE1-208ENST00000414711 GPR158Q5T848 1215 aa17.33■□□□□ 0.36
CPNE1-208ENST00000414711 ZNF280DQ6N043 979 aa17.33■□□□□ 0.36
CPNE1-208ENST00000414711 MOXD1Q6UVY6 613 aa17.33■□□□□ 0.36
CPNE1-208ENST00000414711 CCNI2Q6ZMN8 369 aaPredicted RBP17.33■□□□□ 0.36
CPNE1-208ENST00000414711 TSTD1Q8NFU3 115 aa17.33■□□□□ 0.36
CPNE1-208ENST00000414711 ADPGKQ9BRR6 497 aa17.33■□□□□ 0.36
CPNE1-208ENST00000414711 POLR3FQ9H1D9 316 aaPredicted RBP17.33■□□□□ 0.36
CPNE1-208ENST00000414711 DNAJC25Q9H1X3 360 aa17.33■□□□□ 0.36
CPNE1-208ENST00000414711 ZSWIM4Q9H7M6 989 aa17.33■□□□□ 0.36
CPNE1-208ENST00000414711 RGL1Q9NZL6 768 aa17.33■□□□□ 0.36
CPNE1-208ENST00000414711 GTF3C3Q9Y5Q9 886 aa17.33■□□□□ 0.36
CPNE1-208ENST00000414711 CCDC196A0A1B0GTZ2 297 aa17.32■□□□□ 0.36
CPNE1-208ENST00000414711 DGAT1O75907 488 aa17.32■□□□□ 0.36
CPNE1-208ENST00000414711 CYP4A11Q02928 519 aa17.32■□□□□ 0.36
CPNE1-208ENST00000414711 CTTNQ14247 550 aaKnown RBP17.32■□□□□ 0.36
CPNE1-208ENST00000414711 RNF19BQ6ZMZ0 732 aa17.32■□□□□ 0.36
CPNE1-208ENST00000414711 GAREM2Q75VX8 874 aa17.32■□□□□ 0.36
CPNE1-208ENST00000414711 ADAMTS14Q8WXS8 1223 aa17.32■□□□□ 0.36
CPNE1-208ENST00000414711 POLR3CQ9BUI4 534 aaPredicted RBP17.32■□□□□ 0.36
CPNE1-208ENST00000414711 LSG1Q9H089 658 aaKnown RBP17.32■□□□□ 0.36
CPNE1-208ENST00000414711 ATXN3LQ9H3M9 355 aa17.32■□□□□ 0.36
CPNE1-208ENST00000414711 FBRSL1Q9HCM7 1045 aaKnown RBP17.32■□□□□ 0.36
CPNE1-208ENST00000414711 HPS4Q9NQG7 708 aa17.32■□□□□ 0.36
CPNE1-208ENST00000414711 MBD1Q9UIS9 605 aaPredicted RBP17.32■□□□□ 0.36
CPNE1-208ENST00000414711 HECTD1Q9ULT8 2610 aa17.31■□□□□ 0.36
CPNE1-208ENST00000414711 OTOL1A6NHN0 477 aaPredicted RBP17.31■□□□□ 0.36
CPNE1-208ENST00000414711 TK2O00142 265 aa17.31■□□□□ 0.36
CPNE1-208ENST00000414711 ATXN3P54252 364 aaPredicted RBP17.31■□□□□ 0.36
CPNE1-208ENST00000414711 EPHB3P54753 998 aa17.31■□□□□ 0.36
CPNE1-208ENST00000414711 AKAP17AQ02040 695 aaKnown RBP17.31■□□□□ 0.36
CPNE1-208ENST00000414711 SOX4Q06945 474 aaPredicted RBP17.31■□□□□ 0.36
CPNE1-208ENST00000414711 RUNX3Q13761 415 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms