RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 CYP26C1Q6V0L0 522 aa16.04■□□□□ 0.16
LIMS4-201ENST00000413601 DSTYKQ6XUX3 929 aa16.04■□□□□ 0.16
LIMS4-201ENST00000413601 BRSK2Q8IWQ3 736 aa16.04■□□□□ 0.16
LIMS4-201ENST00000413601 GPD1LQ8N335 351 aa16.04■□□□□ 0.16
LIMS4-201ENST00000413601 TDRD5Q8NAT2 981 aaKnown RBP16.04■□□□□ 0.16
LIMS4-201ENST00000413601 ZNF461Q8TAF7 563 aa16.04■□□□□ 0.16
LIMS4-201ENST00000413601 SLC7A14Q8TBB6 771 aa16.04■□□□□ 0.16
LIMS4-201ENST00000413601 RHOBTB2Q9BYZ6 727 aa16.04■□□□□ 0.16
LIMS4-201ENST00000413601 WDR6Q9NNW5 1121 aaKnown RBP16.04■□□□□ 0.16
LIMS4-201ENST00000413601 CLUHO75153 1309 aa16.03■□□□□ 0.16
LIMS4-201ENST00000413601 UBE4BO95155 1302 aa16.03■□□□□ 0.16
LIMS4-201ENST00000413601 WDR27A2RRH5 827 aa16.03■□□□□ 0.16
LIMS4-201ENST00000413601 KIAA0391O15091 583 aaKnown RBP16.03■□□□□ 0.16
LIMS4-201ENST00000413601 SPTLC1O15269 473 aa16.03■□□□□ 0.16
LIMS4-201ENST00000413601 CCL16O15467 120 aa16.03■□□□□ 0.16
LIMS4-201ENST00000413601 TFAMQ00059 246 aaKnown RBP16.03■□□□□ 0.16
LIMS4-201ENST00000413601 KMT5BQ4FZB7 885 aa16.03■□□□□ 0.16
LIMS4-201ENST00000413601 TMEM31Q5JXX7 168 aa16.03■□□□□ 0.16
LIMS4-201ENST00000413601 ZNF280DQ6N043 979 aa16.03■□□□□ 0.16
LIMS4-201ENST00000413601 FAM84AQ96KN4 292 aa16.03■□□□□ 0.16
LIMS4-201ENST00000413601 PDE11AQ9HCR9 933 aa16.03■□□□□ 0.16
LIMS4-201ENST00000413601 HSPBP1Q9NZL4 362 aa16.03■□□□□ 0.16
LIMS4-201ENST00000413601 LIMD1Q9UGP4 676 aa16.03■□□□□ 0.16
LIMS4-201ENST00000413601 USTQ9Y2C2 406 aa16.03■□□□□ 0.16
LIMS4-201ENST00000413601 CLIC2O15247 247 aa16.02■□□□□ 0.16
LIMS4-201ENST00000413601 GPR37L1O60883 481 aa16.02■□□□□ 0.16
LIMS4-201ENST00000413601 N4BP1O75113 896 aaKnown RBP16.02■□□□□ 0.16
LIMS4-201ENST00000413601 ABLIM3O94929 683 aa16.02■□□□□ 0.16
LIMS4-201ENST00000413601 OAZ2O95190 189 aa16.02■□□□□ 0.16
LIMS4-201ENST00000413601 HNRNPA1P09651 372 aaKnown RBP eCLIP16.02■□□□□ 0.16
LIMS4-201ENST00000413601 PRR29P0C7W0 189 aa16.02■□□□□ 0.16
LIMS4-201ENST00000413601 YWHAHQ04917 246 aaPredicted RBP16.02■□□□□ 0.16
LIMS4-201ENST00000413601 UVSSAQ2YD98 709 aa16.02■□□□□ 0.16
LIMS4-201ENST00000413601 OTOP3Q7RTS5 596 aa16.02■□□□□ 0.16
LIMS4-201ENST00000413601 USP37Q86T82 979 aa16.02■□□□□ 0.16
LIMS4-201ENST00000413601 NT5DC4Q86YG4 428 aa16.02■□□□□ 0.16
LIMS4-201ENST00000413601 CBWD2Q8IUF1 395 aa16.02■□□□□ 0.16
LIMS4-201ENST00000413601 ZDHHC14Q8IZN3 488 aa16.02■□□□□ 0.16
LIMS4-201ENST00000413601 ACSF2Q96CM8 615 aaPredicted RBP16.02■□□□□ 0.16
LIMS4-201ENST00000413601 SENP8Q96LD8 212 aa16.02■□□□□ 0.16
LIMS4-201ENST00000413601 LRFN3Q9BTN0 628 aa16.02■□□□□ 0.16
LIMS4-201ENST00000413601 AGPAT3Q9NRZ7 376 aa16.02■□□□□ 0.16
LIMS4-201ENST00000413601 EXOC1Q9NV70 894 aa16.02■□□□□ 0.16
LIMS4-201ENST00000413601 POLIQ9UNA4 740 aa16.02■□□□□ 0.16
LIMS4-201ENST00000413601 ZNF233A6NK53 670 aa16.01■□□□□ 0.15
LIMS4-201ENST00000413601 ZNF202O95125 648 aa16.01■□□□□ 0.15
LIMS4-201ENST00000413601 ASGR2P07307 311 aa16.01■□□□□ 0.15
LIMS4-201ENST00000413601 ATF2P15336 505 aa16.01■□□□□ 0.15
LIMS4-201ENST00000413601 HOXA9P31269 272 aa16.01■□□□□ 0.15
LIMS4-201ENST00000413601 TAF6P49848 677 aa16.01■□□□□ 0.15
LIMS4-201ENST00000413601 CYP2J2P51589 502 aa16.01■□□□□ 0.15
LIMS4-201ENST00000413601 STK4Q13043 487 aa16.01■□□□□ 0.15
LIMS4-201ENST00000413601 PTPN21Q16825 1174 aa16.01■□□□□ 0.15
LIMS4-201ENST00000413601 KNOP1Q1ED39 458 aaKnown RBP16.01■□□□□ 0.15
LIMS4-201ENST00000413601 BMT2Q1RMZ1 405 aa16.01■□□□□ 0.15
LIMS4-201ENST00000413601 KRBA2Q6ZNG9 492 aa16.01■□□□□ 0.15
LIMS4-201ENST00000413601 GRASPQ7Z6J2 395 aaPredicted RBP16.01■□□□□ 0.15
LIMS4-201ENST00000413601 PLCD3Q8N3E9 789 aa16.01■□□□□ 0.15
LIMS4-201ENST00000413601 RDH13Q8NBN7 331 aa16.01■□□□□ 0.15
LIMS4-201ENST00000413601 KIAA0895Q8NCT3 520 aa16.01■□□□□ 0.15
LIMS4-201ENST00000413601 CACTINQ8WUQ7 758 aaKnown RBP16.01■□□□□ 0.15
LIMS4-201ENST00000413601 EDAQ92838 391 aa16.01■□□□□ 0.15
LIMS4-201ENST00000413601 PRRG1O14668 218 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 SEC24AO95486 1093 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 RPN1P04843 607 aaKnown RBP16■□□□□ 0.15
LIMS4-201ENST00000413601 ITGB3P05106 788 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 MYL1P05976 194 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 OR4Q2P0C623 313 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 ODC1P11926 461 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 CPB1P15086 417 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 TYMPP19971 482 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 PAX3P23760 479 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 POLR2BP30876 1174 aaKnown RBP16■□□□□ 0.15
LIMS4-201ENST00000413601 GBP2P32456 591 aaPredicted RBP16■□□□□ 0.15
LIMS4-201ENST00000413601 ELF1P32519 619 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 SNRPFP62306 86 aaKnown RBP16■□□□□ 0.15
LIMS4-201ENST00000413601 NTHL1P78549 312 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 ZXDAP98168 799 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 ADCY1Q08828 1119 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 PSMD2Q13200 908 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 TPGS2Q68CL5 300 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 LMBRD2Q68DH5 695 aaPredicted RBP16■□□□□ 0.15
LIMS4-201ENST00000413601 SCARA3Q6AZY7 606 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 OVOS1Q6IE37 1185 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 RNF19BQ6ZMZ0 732 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 HS2ST1Q7LGA3 356 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 C1orf127Q8N9H9 656 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 CYP4F11Q9HBI6 524 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 KIAA1586Q9HCI6 787 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 HCFC1R1Q9NWW0 138 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 AGAP1Q9UPQ3 857 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 TECTAO75443 2155 aa16■□□□□ 0.15
LIMS4-201ENST00000413601 PTPRJQ12913 1337 aa15.99■□□□□ 0.15
LIMS4-201ENST00000413601 GOLGA6L4A6NEF3 574 aa15.99■□□□□ 0.15
LIMS4-201ENST00000413601 KPNA7A9QM74 516 aa15.99■□□□□ 0.15
LIMS4-201ENST00000413601 CYB561D2O14569 222 aa15.99■□□□□ 0.15
LIMS4-201ENST00000413601 XYLBO75191 536 aa15.99■□□□□ 0.15
LIMS4-201ENST00000413601 TMEM191BP0C7N4 346 aa15.99■□□□□ 0.15
LIMS4-201ENST00000413601 DPYDQ12882 1025 aa15.99■□□□□ 0.15
LIMS4-201ENST00000413601 SNRNP35Q16560 246 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms