RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 BEST2Q8NFU1 509 aa20.91■□□□□ 0.94
CPSF7-204ENST00000413232 SHDQ96IW2 340 aa20.91■□□□□ 0.94
CPSF7-204ENST00000413232 PARVGQ9HBI0 331 aa20.91■□□□□ 0.94
CPSF7-204ENST00000413232 UBQLN1Q9UMX0 589 aaKnown RBP20.91■□□□□ 0.94
CPSF7-204ENST00000413232 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.91■□□□□ 0.94
CPSF7-204ENST00000413232 ANKRD63C9JTQ0 380 aa20.9■□□□□ 0.94
CPSF7-204ENST00000413232 H0YCG3 227 aa20.9■□□□□ 0.94
CPSF7-204ENST00000413232 OGTO15294 1046 aa20.9■□□□□ 0.94
CPSF7-204ENST00000413232 TRAK2O60296 914 aa20.9■□□□□ 0.94
CPSF7-204ENST00000413232 OAZ2O95190 189 aa20.9■□□□□ 0.94
CPSF7-204ENST00000413232 SP9P0CG40 484 aa20.9■□□□□ 0.94
CPSF7-204ENST00000413232 CYP3A5P20815 502 aa20.9■□□□□ 0.94
CPSF7-204ENST00000413232 MARCKSP29966 332 aaPredicted RBP20.9■□□□□ 0.94
CPSF7-204ENST00000413232 PRKCQQ04759 706 aa20.9■□□□□ 0.94
CPSF7-204ENST00000413232 PPP2R3AQ06190 1150 aa20.9■□□□□ 0.94
CPSF7-204ENST00000413232 ZC2HC1CQ53FD0 456 aaPredicted RBP20.9■□□□□ 0.94
CPSF7-204ENST00000413232 EPSTI1Q96J88 318 aa20.9■□□□□ 0.94
CPSF7-204ENST00000413232 PGLYRP2Q96PD5 576 aa20.9■□□□□ 0.94
CPSF7-204ENST00000413232 ZHX3Q9H4I2 956 aa20.9■□□□□ 0.94
CPSF7-204ENST00000413232 CLIC4Q9Y696 253 aa20.9■□□□□ 0.94
CPSF7-204ENST00000413232 GPR179Q6PRD1 2367 aa20.9■□□□□ 0.94
CPSF7-204ENST00000413232 NCANO14594 1321 aa20.89■□□□□ 0.93
CPSF7-204ENST00000413232 FAM170BA6NMN3 283 aa20.89■□□□□ 0.93
CPSF7-204ENST00000413232 SPTLC1O15269 473 aa20.89■□□□□ 0.93
CPSF7-204ENST00000413232 CPB1P15086 417 aa20.89■□□□□ 0.93
CPSF7-204ENST00000413232 LONP1P36776 959 aaKnown RBP20.89■□□□□ 0.93
CPSF7-204ENST00000413232 GTF2BQ00403 316 aa20.89■□□□□ 0.93
CPSF7-204ENST00000413232 YWHAHQ04917 246 aaPredicted RBP20.89■□□□□ 0.93
CPSF7-204ENST00000413232 GRM2Q14416 872 aa20.89■□□□□ 0.93
CPSF7-204ENST00000413232 UBXN2BQ14CS0 331 aa20.89■□□□□ 0.93
CPSF7-204ENST00000413232 PTPAQ15257 358 aa20.89■□□□□ 0.93
CPSF7-204ENST00000413232 JADE1Q6IE81 842 aa20.89■□□□□ 0.93
CPSF7-204ENST00000413232 BRAPQ7Z569 592 aa20.89■□□□□ 0.93
CPSF7-204ENST00000413232 ELSPBP1Q96BH3 223 aa20.89■□□□□ 0.93
CPSF7-204ENST00000413232 FAM212AQ96EL1 285 aa20.89■□□□□ 0.93
CPSF7-204ENST00000413232 TMEM209Q96SK2 561 aa20.89■□□□□ 0.93
CPSF7-204ENST00000413232 RPF1Q9H9Y2 349 aaKnown RBP20.89■□□□□ 0.93
CPSF7-204ENST00000413232 LTB4R2Q9NPC1 389 aa20.89■□□□□ 0.93
CPSF7-204ENST00000413232 HEBP1Q9NRV9 189 aa20.89■□□□□ 0.93
CPSF7-204ENST00000413232 CPSF3Q9UKF6 684 aaKnown RBP20.89■□□□□ 0.93
CPSF7-204ENST00000413232 NFICP08651 508 aa20.88■□□□□ 0.93
CPSF7-204ENST00000413232 TARSP26639 723 aaKnown RBP20.88■□□□□ 0.93
CPSF7-204ENST00000413232 EPHA5P54756 1037 aa20.88■□□□□ 0.93
CPSF7-204ENST00000413232 PFKPQ01813 784 aa20.88■□□□□ 0.93
CPSF7-204ENST00000413232 FZD5Q13467 585 aa20.88■□□□□ 0.93
CPSF7-204ENST00000413232 CUL4AQ13619 759 aa20.88■□□□□ 0.93
CPSF7-204ENST00000413232 SPATA1Q5VX52 437 aa20.88■□□□□ 0.93
CPSF7-204ENST00000413232 FAM173BQ6P4H8 233 aa20.88■□□□□ 0.93
CPSF7-204ENST00000413232 TPRG1Q6ZUI0 275 aa20.88■□□□□ 0.93
CPSF7-204ENST00000413232 PDZD4Q76G19 769 aaPredicted RBP20.88■□□□□ 0.93
CPSF7-204ENST00000413232 LARP4BQ92615 738 aaKnown RBP20.88■□□□□ 0.93
CPSF7-204ENST00000413232 ZNF512Q96ME7 567 aaPredicted RBP20.88■□□□□ 0.93
CPSF7-204ENST00000413232 ASB16Q96NS5 453 aa20.88■□□□□ 0.93
CPSF7-204ENST00000413232 MSTO1Q9BUK6 570 aa20.88■□□□□ 0.93
CPSF7-204ENST00000413232 LRRC3Q9BY71 257 aa20.88■□□□□ 0.93
CPSF7-204ENST00000413232 CCSER1Q9C0I3 900 aa20.88■□□□□ 0.93
CPSF7-204ENST00000413232 DNAJC25Q9H1X3 360 aa20.88■□□□□ 0.93
CPSF7-204ENST00000413232 UPF2Q9HAU5 1272 aaKnown RBP20.88■□□□□ 0.93
CPSF7-204ENST00000413232 ZNF197O14709 1029 aa20.87■□□□□ 0.93
CPSF7-204ENST00000413232 MICAL2O94851 1124 aa20.87■□□□□ 0.93
CPSF7-204ENST00000413232 MYL4P12829 197 aa20.87■□□□□ 0.93
CPSF7-204ENST00000413232 DDIT3P35638 169 aa20.87■□□□□ 0.93
CPSF7-204ENST00000413232 ACOT2P49753 483 aa20.87■□□□□ 0.93
CPSF7-204ENST00000413232 LILRA4P59901 499 aa20.87■□□□□ 0.93
CPSF7-204ENST00000413232 DUSP4Q13115 394 aa20.87■□□□□ 0.93
CPSF7-204ENST00000413232 MAP4K3Q8IVH8 894 aa20.87■□□□□ 0.93
CPSF7-204ENST00000413232 TTC9BQ8N6N2 239 aa20.87■□□□□ 0.93
CPSF7-204ENST00000413232 ZFP14Q9HCL3 533 aa20.87■□□□□ 0.93
CPSF7-204ENST00000413232 YIPF1Q9Y548 306 aa20.87■□□□□ 0.93
CPSF7-204ENST00000413232 DENND4CQ5VZ89 1909 aa20.86■□□□□ 0.93
CPSF7-204ENST00000413232 VPS37CA5D8V6 355 aaPredicted RBP20.86■□□□□ 0.93
CPSF7-204ENST00000413232 BMP15O95972 392 aa20.86■□□□□ 0.93
CPSF7-204ENST00000413232 KRT18P05783 430 aaKnown RBP20.86■□□□□ 0.93
CPSF7-204ENST00000413232 VIPR2P41587 438 aa20.86■□□□□ 0.93
CPSF7-204ENST00000413232 CDR1P51861 262 aa20.86■□□□□ 0.93
CPSF7-204ENST00000413232 TEAD2Q15562 447 aa20.86■□□□□ 0.93
CPSF7-204ENST00000413232 KYAT1Q16773 422 aa20.86■□□□□ 0.93
CPSF7-204ENST00000413232 CYP4A22Q5TCH4 519 aa20.86■□□□□ 0.93
CPSF7-204ENST00000413232 IQCEQ6IPM2 695 aa20.86■□□□□ 0.93
CPSF7-204ENST00000413232 VITQ6UXI7 678 aa20.86■□□□□ 0.93
CPSF7-204ENST00000413232 DSTYKQ6XUX3 929 aa20.86■□□□□ 0.93
CPSF7-204ENST00000413232 RASSF8Q8NHQ8 419 aa20.86■□□□□ 0.93
CPSF7-204ENST00000413232 SHKBP1Q8TBC3 707 aa20.86■□□□□ 0.93
CPSF7-204ENST00000413232 SENP8Q96LD8 212 aa20.86■□□□□ 0.93
CPSF7-204ENST00000413232 OSBPL6Q9BZF3 934 aa20.86■□□□□ 0.93
CPSF7-204ENST00000413232 MAFFQ9ULX9 164 aa20.86■□□□□ 0.93
CPSF7-204ENST00000413232 SLC27A5Q9Y2P5 690 aa20.86■□□□□ 0.93
CPSF7-204ENST00000413232 PIRO00625 290 aa20.85■□□□□ 0.93
CPSF7-204ENST00000413232 SOAT2O75908 522 aa20.85■□□□□ 0.93
CPSF7-204ENST00000413232 LMNAP02545 664 aaKnown RBP20.85■□□□□ 0.93
CPSF7-204ENST00000413232 GPR17Q13304 367 aa20.85■□□□□ 0.93
CPSF7-204ENST00000413232 C9orf57Q5W0N0 161 aa20.85■□□□□ 0.93
CPSF7-204ENST00000413232 OVOS1Q6IE37 1185 aa20.85■□□□□ 0.93
CPSF7-204ENST00000413232 DYMQ7RTS9 669 aa20.85■□□□□ 0.93
CPSF7-204ENST00000413232 TMC8Q8IU68 726 aa20.85■□□□□ 0.93
CPSF7-204ENST00000413232 ZNF687Q8N1G0 1237 aa20.85■□□□□ 0.93
CPSF7-204ENST00000413232 ATAD1Q8NBU5 361 aa20.85■□□□□ 0.93
CPSF7-204ENST00000413232 KCNG4Q8TDN1 519 aa20.85■□□□□ 0.93
CPSF7-204ENST00000413232 CLDN23Q96B33 292 aa20.85■□□□□ 0.93
CPSF7-204ENST00000413232 RSPRY1Q96DX4 576 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms