RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 PAX3P23760 479 aa14.22□□□□□ -0.13
HDAC8-210ENST00000412342 TAF6P49848 677 aa14.22□□□□□ -0.13
HDAC8-210ENST00000412342 MRPS5P82675 430 aaKnown RBP14.22□□□□□ -0.13
HDAC8-210ENST00000412342 CREMQ03060 361 aa14.22□□□□□ -0.13
HDAC8-210ENST00000412342 PDXDC1Q6P996 788 aa14.22□□□□□ -0.13
HDAC8-210ENST00000412342 PPFIBP1Q86W92 1011 aa14.22□□□□□ -0.13
HDAC8-210ENST00000412342 SMRP1Q8NCR6 262 aa14.22□□□□□ -0.13
HDAC8-210ENST00000412342 FEZF2Q8TBJ5 459 aa14.22□□□□□ -0.13
HDAC8-210ENST00000412342 CACTINQ8WUQ7 758 aaKnown RBP14.22□□□□□ -0.13
HDAC8-210ENST00000412342 CASP10Q92851 521 aa14.22□□□□□ -0.13
HDAC8-210ENST00000412342 CCDC127Q96BQ5 260 aa14.22□□□□□ -0.13
HDAC8-210ENST00000412342 ASB2Q96Q27 587 aa14.22□□□□□ -0.13
HDAC8-210ENST00000412342 S1PR5Q9H228 398 aa14.22□□□□□ -0.13
HDAC8-210ENST00000412342 DENND4AQ7Z401 1863 aa14.22□□□□□ -0.13
HDAC8-210ENST00000412342 TCF20Q9UGU0 1960 aaKnown RBP14.22□□□□□ -0.13
HDAC8-210ENST00000412342 TRIM49BA6NDI0 452 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 GRXCR2A6NFK2 248 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 LRRIQ3A6PVS8 624 aaPredicted RBP14.21□□□□□ -0.13
HDAC8-210ENST00000412342 BIN1O00499 593 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 MBTPS2O43462 519 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 TGM5O43548 720 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 PAPLNO95428 1278 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 CYP11A1P05108 521 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 TMEM191BP0C7N4 346 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 DLATP10515 647 aaKnown RBP14.21□□□□□ -0.13
HDAC8-210ENST00000412342 TYMPP19971 482 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 CCNE1P24864 410 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 KLRC2P26717 231 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 DLG4P78352 724 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 RAB33AQ14088 237 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 DUOXA2Q1HG44 320 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 ANKRD40Q6AI12 368 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 SLC8B1Q6J4K2 584 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 EP400NLQ6ZTU2 488 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 ANKS3Q6ZW76 656 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 TRAPPC11Q7Z392 1133 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 LRRC52Q8N7C0 313 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 TRIML1Q8N9V2 468 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 DHTKD1Q96HY7 919 aaPredicted RBP14.21□□□□□ -0.13
HDAC8-210ENST00000412342 ANKRD36BP1Q96IX9 119 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 SENP8Q96LD8 212 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 CD207Q9UJ71 328 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 AGAP1Q9UPQ3 857 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 TIMM13Q9Y5L4 95 aaPredicted RBP14.21□□□□□ -0.13
HDAC8-210ENST00000412342 VCANP13611 3396 aa14.21□□□□□ -0.13
HDAC8-210ENST00000412342 OAZ2O95190 189 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 GLUD1P00367 558 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 PNPLA4P41247 253 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 LRRC63Q05C16 580 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 ADAM9Q13443 819 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 SMAD4Q13485 552 aaKnown RBP14.2□□□□□ -0.14
HDAC8-210ENST00000412342 CLUL1Q15846 466 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 AAK1Q2M2I8 961 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 CEP135Q66GS9 1140 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 TTI2Q6NXR4 508 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 FOXR2Q6PJQ5 311 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 DSTYKQ6XUX3 929 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 PALB2Q86YC2 1186 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 GLYCTKQ8IVS8 523 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 CSGALNACT2Q8N6G5 542 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 APPL2Q8NEU8 664 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 TMC2Q8TDI7 906 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 SUSD6Q92537 303 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 ZNF560Q96MR9 790 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 FNBP1Q96RU3 617 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 DUSP9Q99956 384 aaKnown RBP14.2□□□□□ -0.14
HDAC8-210ENST00000412342 MKNK1Q9BUB5 465 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 NUP62CLQ9H1M0 184 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 DZANK1Q9NVP4 752 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 FBXL5Q9UKA1 691 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 FBXW11Q9UKB1 542 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 CDY1Q9Y6F8 540 aa14.2□□□□□ -0.14
HDAC8-210ENST00000412342 KPNA7A9QM74 516 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 PSMA7O14818 248 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 CST3P01034 146 aaPredicted RBP14.19□□□□□ -0.14
HDAC8-210ENST00000412342 TNNC2P02585 160 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 C4BPAP04003 597 aaKnown RBP14.19□□□□□ -0.14
HDAC8-210ENST00000412342 SRGAP2BP0DMP2 458 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 IL9P15248 144 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 HOXB8P17481 243 aaPredicted RBP14.19□□□□□ -0.14
HDAC8-210ENST00000412342 TNNI1P19237 187 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 RPL13P26373 211 aaKnown RBP14.19□□□□□ -0.14
HDAC8-210ENST00000412342 OR1D2P34982 312 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 PSMC2P35998 433 aaKnown RBP14.19□□□□□ -0.14
HDAC8-210ENST00000412342 PPP1R2P41236 205 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 RBP5P82980 135 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 ROR1Q01973 937 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 ENPEPQ07075 957 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 SV2CQ496J9 727 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 TJAP1Q5JTD0 557 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 TDRD10Q5VZ19 366 aaKnown RBP14.19□□□□□ -0.14
HDAC8-210ENST00000412342 PTCRAQ6ISU1 281 aaPredicted RBP14.19□□□□□ -0.14
HDAC8-210ENST00000412342 ZNF280DQ6N043 979 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 C15orf39Q6ZRI6 1047 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 RBM43Q6ZSC3 357 aaKnown RBP14.19□□□□□ -0.14
HDAC8-210ENST00000412342 LIMS2Q7Z4I7 341 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 FAM186BQ8IYM0 893 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 HDAC7Q8WUI4 952 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 EEF2KMTQ96G04 330 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 MED15Q96RN5 788 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms