RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 ZNF568Q3ZCX4 644 aa20.61■□□□□ 0.89
LMO2-203ENST00000411482 CD101Q93033 1021 aa20.61■□□□□ 0.89
LMO2-203ENST00000411482 ZBTB10Q96DT7 871 aa20.61■□□□□ 0.89
LMO2-203ENST00000411482 TRIM11Q96F44 468 aa20.61■□□□□ 0.89
LMO2-203ENST00000411482 GDF3Q9NR23 364 aa20.61■□□□□ 0.89
LMO2-203ENST00000411482 A0A087WZ62 844 aa20.6■□□□□ 0.89
LMO2-203ENST00000411482 C6orf222P0C671 652 aaPredicted RBP20.6■□□□□ 0.89
LMO2-203ENST00000411482 IGBP1P78318 339 aa20.6■□□□□ 0.89
LMO2-203ENST00000411482 BEX3Q00994 111 aa20.6■□□□□ 0.89
LMO2-203ENST00000411482 KCNA10Q16322 511 aa20.6■□□□□ 0.89
LMO2-203ENST00000411482 C8orf74Q6P047 294 aa20.6■□□□□ 0.89
LMO2-203ENST00000411482 ZNF410Q86VK4 478 aa20.6■□□□□ 0.89
LMO2-203ENST00000411482 MCOLN2Q8IZK6 566 aa20.6■□□□□ 0.89
LMO2-203ENST00000411482 EIF1ADQ8N9N8 165 aaKnown RBP20.6■□□□□ 0.89
LMO2-203ENST00000411482 OR6J1Q8NGC5 347 aa20.6■□□□□ 0.89
LMO2-203ENST00000411482 AENQ8WTP8 325 aaKnown RBP20.6■□□□□ 0.89
LMO2-203ENST00000411482 VCPIP1Q96JH7 1222 aa20.6■□□□□ 0.89
LMO2-203ENST00000411482 FDXACB1Q9BRP7 624 aaPredicted RBP20.6■□□□□ 0.89
LMO2-203ENST00000411482 IMPG2Q9BZV3 1241 aa20.6■□□□□ 0.89
LMO2-203ENST00000411482 ALPK3Q96L96 1907 aa20.59■□□□□ 0.89
LMO2-203ENST00000411482 ZEB2O60315 1214 aa20.59■□□□□ 0.89
LMO2-203ENST00000411482 CDC42EP1Q00587 391 aa20.59■□□□□ 0.89
LMO2-203ENST00000411482 PPFIA1Q13136 1202 aa20.59■□□□□ 0.89
LMO2-203ENST00000411482 GRIK4Q16099 956 aa20.59■□□□□ 0.89
LMO2-203ENST00000411482 GNASQ5JWF2 1037 aa20.59■□□□□ 0.89
LMO2-203ENST00000411482 RNF180Q86T96 592 aa20.59■□□□□ 0.89
LMO2-203ENST00000411482 EFCAB13Q8IY85 973 aa20.59■□□□□ 0.89
LMO2-203ENST00000411482 KIAA0319LQ8IZA0 1049 aa20.59■□□□□ 0.89
LMO2-203ENST00000411482 TSEN34Q9BSV6 310 aaKnown RBP20.59■□□□□ 0.89
LMO2-203ENST00000411482 MTMR12Q9C0I1 747 aa20.59■□□□□ 0.89
LMO2-203ENST00000411482 AP5M1Q9H0R1 490 aa20.59■□□□□ 0.89
LMO2-203ENST00000411482 XYLT2Q9H1B5 865 aa20.59■□□□□ 0.89
LMO2-203ENST00000411482 RNF216Q9NWF9 866 aaPredicted RBP20.59■□□□□ 0.89
LMO2-203ENST00000411482 PCDHB4Q9Y5E5 795 aa20.59■□□□□ 0.89
LMO2-203ENST00000411482 ANK1P16157 1881 aa20.59■□□□□ 0.89
LMO2-203ENST00000411482 UMODL1Q5DID0 1318 aa20.59■□□□□ 0.89
LMO2-203ENST00000411482 CLSTN1O94985 981 aa20.58■□□□□ 0.89
LMO2-203ENST00000411482 PEX5P50542 639 aa20.58■□□□□ 0.89
LMO2-203ENST00000411482 DNA2P51530 1060 aa20.58■□□□□ 0.89
LMO2-203ENST00000411482 MYL6P60660 151 aa20.58■□□□□ 0.89
LMO2-203ENST00000411482 CASP8Q14790 479 aa20.58■□□□□ 0.89
LMO2-203ENST00000411482 FSCN1Q16658 493 aaKnown RBP20.58■□□□□ 0.89
LMO2-203ENST00000411482 DCAF12L1Q5VU92 463 aa20.58■□□□□ 0.89
LMO2-203ENST00000411482 SCARA3Q6AZY7 606 aa20.58■□□□□ 0.89
LMO2-203ENST00000411482 THNSL1Q8IYQ7 743 aa20.58■□□□□ 0.89
LMO2-203ENST00000411482 RBBP8NLQ8NC74 664 aaPredicted RBP20.58■□□□□ 0.89
LMO2-203ENST00000411482 ZNF653Q96CK0 615 aa20.58■□□□□ 0.89
LMO2-203ENST00000411482 NUP85Q9BW27 656 aa20.58■□□□□ 0.89
LMO2-203ENST00000411482 NIF3L1Q9GZT8 377 aa20.58■□□□□ 0.89
LMO2-203ENST00000411482 WNT8AQ9H1J5 351 aa20.58■□□□□ 0.89
LMO2-203ENST00000411482 PDZD7Q9H5P4 517 aa20.58■□□□□ 0.89
LMO2-203ENST00000411482 ASB7Q9H672 318 aa20.58■□□□□ 0.89
LMO2-203ENST00000411482 RPF1Q9H9Y2 349 aaKnown RBP20.58■□□□□ 0.89
LMO2-203ENST00000411482 PHF24Q9UPV7 400 aa20.58■□□□□ 0.89
LMO2-203ENST00000411482 NOC2LQ9Y3T9 749 aaKnown RBP20.58■□□□□ 0.89
LMO2-203ENST00000411482 TNNC2P02585 160 aa20.58■□□□□ 0.88
LMO2-203ENST00000411482 MYCNP04198 464 aaPredicted RBP20.58■□□□□ 0.88
LMO2-203ENST00000411482 MYBL2P10244 700 aa20.58■□□□□ 0.88
LMO2-203ENST00000411482 CTNNA2P26232 953 aa20.58■□□□□ 0.88
LMO2-203ENST00000411482 TMEM270Q6UE05 265 aa20.58■□□□□ 0.88
LMO2-203ENST00000411482 PHF13Q86YI8 300 aaPredicted RBP20.58■□□□□ 0.88
LMO2-203ENST00000411482 ZNF564Q8TBZ8 553 aaPredicted RBP20.58■□□□□ 0.88
LMO2-203ENST00000411482 ALG3Q92685 438 aa20.58■□□□□ 0.88
LMO2-203ENST00000411482 AKT3Q9Y243 479 aa20.58■□□□□ 0.88
LMO2-203ENST00000411482 A0A1B0GUA9 196 aa20.57■□□□□ 0.88
LMO2-203ENST00000411482 TULP1O00294 542 aaPredicted RBP20.57■□□□□ 0.88
LMO2-203ENST00000411482 MEFVO15553 781 aaPredicted RBP20.57■□□□□ 0.88
LMO2-203ENST00000411482 F2P00734 622 aa20.57■□□□□ 0.88
LMO2-203ENST00000411482 ASGR1P07306 291 aa20.57■□□□□ 0.88
LMO2-203ENST00000411482 ACLYP53396 1101 aa20.57■□□□□ 0.88
LMO2-203ENST00000411482 NOMO3P69849 1222 aa20.57■□□□□ 0.88
LMO2-203ENST00000411482 PPP2R5EQ16537 467 aa20.57■□□□□ 0.88
LMO2-203ENST00000411482 MON1BQ7L1V2 547 aa20.57■□□□□ 0.88
LMO2-203ENST00000411482 NECAB2Q7Z6G3 386 aa20.57■□□□□ 0.88
LMO2-203ENST00000411482 IFT20Q8IY31 132 aa20.57■□□□□ 0.88
LMO2-203ENST00000411482 CEP120Q8N960 986 aa20.57■□□□□ 0.88
LMO2-203ENST00000411482 CXorf38Q8TB03 319 aa20.57■□□□□ 0.88
LMO2-203ENST00000411482 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.57■□□□□ 0.88
LMO2-203ENST00000411482 ANKRD36BP1Q96IX9 119 aa20.57■□□□□ 0.88
LMO2-203ENST00000411482 KRT12Q99456 494 aa20.57■□□□□ 0.88
LMO2-203ENST00000411482 NAP1L3Q99457 506 aaPredicted RBP20.57■□□□□ 0.88
LMO2-203ENST00000411482 ZSWIM1Q9BR11 485 aa20.57■□□□□ 0.88
LMO2-203ENST00000411482 SLITRK6Q9H5Y7 841 aa20.57■□□□□ 0.88
LMO2-203ENST00000411482 VRTNQ9H8Y1 702 aa20.57■□□□□ 0.88
LMO2-203ENST00000411482 SPC25Q9HBM1 224 aa20.57■□□□□ 0.88
LMO2-203ENST00000411482 CNOT8Q9UFF9 292 aaKnown RBP20.57■□□□□ 0.88
LMO2-203ENST00000411482 TNRC18O15417 2968 aaPredicted RBP20.56■□□□□ 0.88
LMO2-203ENST00000411482 MBLAC1A4D2B0 266 aaPredicted RBP20.56■□□□□ 0.88
LMO2-203ENST00000411482 KBTBD13C9JR72 458 aa20.56■□□□□ 0.88
LMO2-203ENST00000411482 ZMYND10O75800 440 aa20.56■□□□□ 0.88
LMO2-203ENST00000411482 GLI1P08151 1106 aa20.56■□□□□ 0.88
LMO2-203ENST00000411482 STAG3L1P0CL83 205 aa20.56■□□□□ 0.88
LMO2-203ENST00000411482 ARF4P18085 180 aaPredicted RBP20.56■□□□□ 0.88
LMO2-203ENST00000411482 COMTP21964 271 aa20.56■□□□□ 0.88
LMO2-203ENST00000411482 GNA15P30679 374 aa20.56■□□□□ 0.88
LMO2-203ENST00000411482 PCBP1Q15365 356 aaKnown RBP eCLIP20.56■□□□□ 0.88
LMO2-203ENST00000411482 UBL4BQ8N7F7 174 aa20.56■□□□□ 0.88
LMO2-203ENST00000411482 KAT2BQ92831 832 aa20.56■□□□□ 0.88
LMO2-203ENST00000411482 ZNF668Q96K58 619 aaPredicted RBP20.56■□□□□ 0.88
LMO2-203ENST00000411482 ADAMTS10Q9H324 1103 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms