RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 C2CD2Q9Y426 696 aa20.66■□□□□ 0.9
SF3A1-202ENST00000411423 WDFY4Q6ZS81 3184 aa20.66■□□□□ 0.9
SF3A1-202ENST00000411423 NRG2O14511 850 aaPredicted RBP20.65■□□□□ 0.9
SF3A1-202ENST00000411423 TGFB1I1O43294 461 aa20.65■□□□□ 0.9
SF3A1-202ENST00000411423 XPOTO43592 962 aaKnown RBP20.65■□□□□ 0.9
SF3A1-202ENST00000411423 KLRC4O43908 158 aa20.65■□□□□ 0.9
SF3A1-202ENST00000411423 PFKFB1P16118 471 aa20.65■□□□□ 0.9
SF3A1-202ENST00000411423 GBP2P32456 591 aaPredicted RBP20.65■□□□□ 0.9
SF3A1-202ENST00000411423 POU5F1Q01860 360 aaKnown RBP20.65■□□□□ 0.9
SF3A1-202ENST00000411423 FAM26FQ5R3K3 315 aa20.65■□□□□ 0.9
SF3A1-202ENST00000411423 RNF19BQ6ZMZ0 732 aa20.65■□□□□ 0.9
SF3A1-202ENST00000411423 UNC13DQ70J99 1090 aa20.65■□□□□ 0.9
SF3A1-202ENST00000411423 APPL2Q8NEU8 664 aa20.65■□□□□ 0.9
SF3A1-202ENST00000411423 BORCS6Q96GS4 357 aa20.65■□□□□ 0.9
SF3A1-202ENST00000411423 TMEM209Q96SK2 561 aa20.65■□□□□ 0.9
SF3A1-202ENST00000411423 LRRC27Q9C0I9 530 aa20.65■□□□□ 0.9
SF3A1-202ENST00000411423 TMEM206Q9H813 350 aa20.65■□□□□ 0.9
SF3A1-202ENST00000411423 KCNK12Q9HB15 430 aa20.65■□□□□ 0.9
SF3A1-202ENST00000411423 DPP3Q9NY33 737 aa20.65■□□□□ 0.9
SF3A1-202ENST00000411423 EPS15L1Q9UBC2 864 aa20.65■□□□□ 0.9
SF3A1-202ENST00000411423 H7C4K7 107 aa20.64■□□□□ 0.89
SF3A1-202ENST00000411423 OAZ2O95190 189 aa20.64■□□□□ 0.89
SF3A1-202ENST00000411423 ATF2P15336 505 aa20.64■□□□□ 0.89
SF3A1-202ENST00000411423 AMPD3Q01432 767 aa20.64■□□□□ 0.89
SF3A1-202ENST00000411423 MTMR3Q13615 1198 aa20.64■□□□□ 0.89
SF3A1-202ENST00000411423 UVSSAQ2YD98 709 aa20.64■□□□□ 0.89
SF3A1-202ENST00000411423 ZNF280DQ6N043 979 aa20.64■□□□□ 0.89
SF3A1-202ENST00000411423 DSTYKQ6XUX3 929 aa20.64■□□□□ 0.89
SF3A1-202ENST00000411423 BMP8AQ7Z5Y6 402 aa20.64■□□□□ 0.89
SF3A1-202ENST00000411423 CXorf38Q8TB03 319 aa20.64■□□□□ 0.89
SF3A1-202ENST00000411423 ITFG1Q8TB96 612 aa20.64■□□□□ 0.89
SF3A1-202ENST00000411423 ZNF507Q8TCN5 953 aa20.64■□□□□ 0.89
SF3A1-202ENST00000411423 SCFD1Q8WVM8 642 aa20.64■□□□□ 0.89
SF3A1-202ENST00000411423 SENP8Q96LD8 212 aa20.64■□□□□ 0.89
SF3A1-202ENST00000411423 SPATA32Q96LK8 384 aa20.64■□□□□ 0.89
SF3A1-202ENST00000411423 CRISPLD1Q9H336 500 aa20.64■□□□□ 0.89
SF3A1-202ENST00000411423 MAGEF1Q9HAY2 307 aa20.64■□□□□ 0.89
SF3A1-202ENST00000411423 POLIQ9UNA4 740 aa20.64■□□□□ 0.89
SF3A1-202ENST00000411423 TCHHQ07283 1943 aa20.63■□□□□ 0.89
SF3A1-202ENST00000411423 PTPRJQ12913 1337 aa20.63■□□□□ 0.89
SF3A1-202ENST00000411423 ARHGEF37A1IGU5 675 aa20.63■□□□□ 0.89
SF3A1-202ENST00000411423 NARSO43776 548 aaKnown RBP20.63■□□□□ 0.89
SF3A1-202ENST00000411423 EXTL3O43909 919 aa20.63■□□□□ 0.89
SF3A1-202ENST00000411423 POU2F2P09086 479 aa20.63■□□□□ 0.89
SF3A1-202ENST00000411423 FSHRP23945 695 aa20.63■□□□□ 0.89
SF3A1-202ENST00000411423 CMA1P23946 247 aa20.63■□□□□ 0.89
SF3A1-202ENST00000411423 KRT85P78386 507 aa20.63■□□□□ 0.89
SF3A1-202ENST00000411423 YWHAHQ04917 246 aaPredicted RBP20.63■□□□□ 0.89
SF3A1-202ENST00000411423 ARMCX5Q6P1M9 558 aa20.63■□□□□ 0.89
SF3A1-202ENST00000411423 PAGE5Q96GU1 130 aa20.63■□□□□ 0.89
SF3A1-202ENST00000411423 RTP3Q9BQQ7 232 aa20.63■□□□□ 0.89
SF3A1-202ENST00000411423 GDPD2Q9HCC8 539 aa20.63■□□□□ 0.89
SF3A1-202ENST00000411423 PDE11AQ9HCR9 933 aa20.63■□□□□ 0.89
SF3A1-202ENST00000411423 RBAKQ9NYW8 714 aaPredicted RBP20.63■□□□□ 0.89
SF3A1-202ENST00000411423 EIF3DO15371 548 aaKnown RBP eCLIP20.62■□□□□ 0.89
SF3A1-202ENST00000411423 IL18RAPO95256 599 aa20.62■□□□□ 0.89
SF3A1-202ENST00000411423 SLFN14P0C7P3 912 aa20.62■□□□□ 0.89
SF3A1-202ENST00000411423 LAMP2P13473 410 aa20.62■□□□□ 0.89
SF3A1-202ENST00000411423 ADCY1Q08828 1119 aa20.62■□□□□ 0.89
SF3A1-202ENST00000411423 SLC5A9Q2M3M2 681 aa20.62■□□□□ 0.89
SF3A1-202ENST00000411423 LMBRD2Q68DH5 695 aaPredicted RBP20.62■□□□□ 0.89
SF3A1-202ENST00000411423 CBWD2Q8IUF1 395 aa20.62■□□□□ 0.89
SF3A1-202ENST00000411423 NELFCDQ8IXH7 590 aa20.62■□□□□ 0.89
SF3A1-202ENST00000411423 TCEAL8Q8IYN2 117 aa20.62■□□□□ 0.89
SF3A1-202ENST00000411423 C1orf127Q8N9H9 656 aa20.62■□□□□ 0.89
SF3A1-202ENST00000411423 OR10T2Q8NGX3 314 aa20.62■□□□□ 0.89
SF3A1-202ENST00000411423 NOC3LQ8WTT2 800 aaKnown RBP20.62■□□□□ 0.89
SF3A1-202ENST00000411423 PBXIP1Q96AQ6 731 aa20.62■□□□□ 0.89
SF3A1-202ENST00000411423 GOLPH3LQ9H4A5 285 aa20.62■□□□□ 0.89
SF3A1-202ENST00000411423 CYP4F11Q9HBI6 524 aa20.62■□□□□ 0.89
SF3A1-202ENST00000411423 SLC39A2Q9NP94 309 aa20.62■□□□□ 0.89
SF3A1-202ENST00000411423 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.62■□□□□ 0.89
SF3A1-202ENST00000411423 FAM237AA0A1B0GTK4 181 aa20.61■□□□□ 0.89
SF3A1-202ENST00000411423 TYMPP19971 482 aa20.61■□□□□ 0.89
SF3A1-202ENST00000411423 CDR1P51861 262 aa20.61■□□□□ 0.89
SF3A1-202ENST00000411423 NDUFA8P51970 172 aa20.61■□□□□ 0.89
SF3A1-202ENST00000411423 TFAMQ00059 246 aaKnown RBP20.61■□□□□ 0.89
SF3A1-202ENST00000411423 TPGS2Q68CL5 300 aa20.61■□□□□ 0.89
SF3A1-202ENST00000411423 UBALD2Q8IYN6 164 aa20.61■□□□□ 0.89
SF3A1-202ENST00000411423 GPD1LQ8N335 351 aa20.61■□□□□ 0.89
SF3A1-202ENST00000411423 PGLYRP2Q96PD5 576 aa20.61■□□□□ 0.89
SF3A1-202ENST00000411423 RPP25Q9BUL9 199 aaKnown RBP20.61■□□□□ 0.89
SF3A1-202ENST00000411423 HSPBP1Q9NZL4 362 aa20.61■□□□□ 0.89
SF3A1-202ENST00000411423 AFF4Q9UHB7 1163 aaKnown RBP20.61■□□□□ 0.89
SF3A1-202ENST00000411423 INSL5Q9Y5Q6 135 aa20.61■□□□□ 0.89
SF3A1-202ENST00000411423 PVALEFA0A1B0GWK0 134 aa20.6■□□□□ 0.89
SF3A1-202ENST00000411423 ANHXE9PGG2 379 aa20.6■□□□□ 0.89
SF3A1-202ENST00000411423 TULP1O00294 542 aaPredicted RBP20.6■□□□□ 0.89
SF3A1-202ENST00000411423 CLIC2O15247 247 aa20.6■□□□□ 0.89
SF3A1-202ENST00000411423 XYLBO75191 536 aa20.6■□□□□ 0.89
SF3A1-202ENST00000411423 LDHAP00338 332 aaKnown RBP20.6■□□□□ 0.89
SF3A1-202ENST00000411423 CYP11A1P05108 521 aa20.6■□□□□ 0.89
SF3A1-202ENST00000411423 PRR29P0C7W0 189 aa20.6■□□□□ 0.89
SF3A1-202ENST00000411423 CPB1P15086 417 aa20.6■□□□□ 0.89
SF3A1-202ENST00000411423 VCPP55072 806 aaKnown RBP20.6■□□□□ 0.89
SF3A1-202ENST00000411423 TDGQ13569 410 aa20.6■□□□□ 0.89
SF3A1-202ENST00000411423 HTR4Q13639 388 aa20.6■□□□□ 0.89
SF3A1-202ENST00000411423 OVOS1Q6IE37 1185 aa20.6■□□□□ 0.89
SF3A1-202ENST00000411423 CEP57L1Q8IYX8 460 aa20.6■□□□□ 0.89
SF3A1-202ENST00000411423 TTC9BQ8N6N2 239 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms