RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 MYL4P12829 197 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 RXRAP19793 462 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 PTNP21246 168 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 PON1P27169 355 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 PSMA5P28066 241 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 ACADVLP49748 655 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 DLG1Q12959 904 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 C5orf22Q49AR2 442 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 PRR5LQ6MZQ0 368 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 TAF8Q7Z7C8 310 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 ZER1Q7Z7L7 766 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 KBTBD2Q8IY47 623 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 HACE1Q8IYU2 909 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 ZNF654Q8IZM8 581 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 TTC29Q8NA56 475 aaPredicted RBP5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 OR8H1Q8NGG4 311 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 ADIPOR1Q96A54 375 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 ZSCAN5AQ9BUG6 496 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 TBC1D10AQ9BXI6 508 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 NCOR1P1Q9H4R4 102 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 PPANQ9NQ55 473 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 TBC1D14Q9P2M4 693 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 TRPS1Q9UHF7 1281 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 STAP1Q9ULZ2 295 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 EXOGQ9Y2C4 368 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 MAP3K5Q99683 1374 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 NPIPA5A0A0B4J1W7 369 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 RNF103-CHMP3A0A140T963 221 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 B4E1Z4 1266 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 RNF103O00237 685 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 CCRL2O00421 344 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 ZNF254O75437 659 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 SNAP29O95721 258 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 CFBP00751 764 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 IGFBP1P08833 259 aaPredicted RBP5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 UMPSP11172 480 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 RAB4AP20338 218 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 SYKP43405 635 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 MTIF2P46199 727 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 PIK3CGP48736 1102 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 PRIM2P49643 509 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 GATMP50440 423 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 VAV2P52735 878 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 ATP12AP54707 1039 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 DEFA1P59665 94 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 DEFA3P59666 94 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 DEFA6Q01524 100 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 ILF3Q12906 894 aaKnown RBP eCLIP5.49□□□□□ -1.537e-6■■■■□ 19.9
R3HDM1-204ENST00000410054 GRIK3Q13003 919 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 KLHL12Q53G59 568 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 C6orf10Q5SRN2 563 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 AFMIDQ63HM1 303 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 E4F1Q66K89 784 aaPredicted RBP5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 TCEAL6Q6IPX3 200 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 ALKBH5Q6P6C2 394 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 TRPV3Q8NET8 790 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 MAGEC3Q8TD91 643 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 MAFIPQ8WZ33 124 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 PPP1R16BQ96T49 567 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 USP44Q9H0E7 712 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 VPS28Q9UK41 221 aa5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 C14orf166Q9Y224 244 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-204ENST00000410054 MINK1Q8N4C8 1332 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 PRSS44E7EML9 344 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 TNPO2O14787 897 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 PEX11AO75192 247 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 NIPSNAP2O75323 286 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 FARP2O94887 1054 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 CHN1P15882 459 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 SARSP49591 514 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 FXR2P51116 673 aaKnown RBP eCLIP5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 PSMD4P55036 377 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 OXCT1P55809 520 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 REEP5Q00765 189 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 CHAF1BQ13112 559 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 CUL4AQ13619 759 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 GPR176Q14439 515 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 LLGL1Q15334 1064 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 GARNL3Q5VVW2 1013 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 ZNF746Q6NUN9 644 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 C3orf33Q6P1S2 294 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 TRIM65Q6PJ69 517 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 KCNK18Q7Z418 384 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 RHPN2Q8IUC4 686 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 ULK2Q8IYT8 1036 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 NLGN1Q8N2Q7 840 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 ZNF786Q8N393 782 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 SHCBP1Q8NEM2 672 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 VANGL1Q8TAA9 524 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 TCEAL3Q969E4 200 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 HS6ST2Q96MM7 605 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 VPS35Q96QK1 796 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 PANX2Q96RD6 677 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 IFIH1Q9BYX4 1025 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 UNKQ9C0B0 810 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 C6orf62Q9GZU0 229 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 TRMT13Q9NUP7 481 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 NDFIP2Q9NV92 336 aa5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 CHORDC1Q9UHD1 332 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-204ENST00000410054 DNM3Q9UQ16 869 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms