RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 BMP7P18075 431 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 GNAT2P19087 354 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 CD53P19397 219 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 TNFSF4P23510 183 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 MSX2P35548 267 aaPredicted RBP6.23□□□□□ -1.41
LSM5-206ENST00000409987 KCNJ5P48544 419 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 PSMC1P62191 440 aaKnown RBP6.23□□□□□ -1.41
LSM5-206ENST00000409987 FOXD4Q12950 439 aaPredicted RBP6.23□□□□□ -1.41
LSM5-206ENST00000409987 DAG1Q14118 895 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 ELAVL1Q15717 326 aaKnown RBP6.23□□□□□ -1.41
LSM5-206ENST00000409987 TMEM95Q3KNT9 176 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 INO80DQ53TQ3 878 aaPredicted RBP6.23□□□□□ -1.41
LSM5-206ENST00000409987 C3orf38Q5JPI3 329 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 UTP14CQ5TAP6 766 aaKnown RBP6.23□□□□□ -1.41
LSM5-206ENST00000409987 TCTN3Q6NUS6 607 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 PDSS2Q86YH6 399 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 LIX1LQ8IVB5 337 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 FUKQ8N0W3 1084 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 OR52N2Q8NGI0 321 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 OR6B3Q8NGW1 331 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 ZFP28Q8NHY6 868 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 DEPTORQ8TB45 409 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 ST8SIA2Q92186 375 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 MSLNLQ96KJ4 702 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 SPON1Q9HCB6 807 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 CASS4Q9NQ75 786 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 SACM1LQ9NTJ5 587 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 COL20A1Q9P218 1284 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 SRRDQ9UH36 339 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 AFF4Q9UHB7 1163 aaKnown RBP6.23□□□□□ -1.41
LSM5-206ENST00000409987 SLC30A1Q9Y6M5 507 aa6.23□□□□□ -1.41
LSM5-206ENST00000409987 ARID1BQ8NFD5 2236 aaPredicted RBP6.23□□□□□ -1.41
LSM5-206ENST00000409987 CDHR4A6H8M9 788 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 DBX1A6NMT0 343 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 BTN3A1O00481 513 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 FOXS1O43638 330 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 IL18RAPO95256 599 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 ABHD16AO95870 558 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 STT3AP46977 705 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 TBC1D10BQ4KMP7 808 aaPredicted RBP6.22□□□□□ -1.41
LSM5-206ENST00000409987 FAM209BQ5JX69 171 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 EFCAB12Q6NXP0 572 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 C1orf228Q6PIY5 440 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 RNF152Q8N8N0 203 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 PCSK9Q8NBP7 692 aaKnown RBP6.22□□□□□ -1.41
LSM5-206ENST00000409987 ACRBPQ8NEB7 543 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 TMIEQ8NEW7 156 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 MDGA1Q8NFP4 955 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 ZSCAN18Q8TBC5 510 aaPredicted RBP6.22□□□□□ -1.41
LSM5-206ENST00000409987 NMD3Q96D46 503 aaKnown RBP6.22□□□□□ -1.41
LSM5-206ENST00000409987 MPHOSPH9Q99550 1183 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 PPCSQ9HAB8 311 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 GPR35Q9HC97 309 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 PTPRHQ9HD43 1115 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 PNPLA8Q9NP80 782 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 STARD7Q9NQZ5 370 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 ANAPC4Q9UJX5 808 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 AGAP1Q9UPQ3 857 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 ZFR2Q9UPR6 939 aaKnown RBP6.22□□□□□ -1.41
LSM5-206ENST00000409987 ZNF536O15090 1300 aa6.22□□□□□ -1.41
LSM5-206ENST00000409987 TRIM43BA6NCK2 446 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 NPEPPSL1A6NEC2 478 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 OTOL1A6NHN0 477 aaPredicted RBP6.21□□□□□ -1.42
LSM5-206ENST00000409987 ZNF785A8K8V0 405 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 NPHP1O15259 732 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 GPR42O15529 346 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 DNAJB5O75953 348 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 AGFG2O95081 481 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 PRSS23O95084 383 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 ITGB1P05556 798 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 ZSCAN22P10073 491 aaPredicted RBP6.21□□□□□ -1.42
LSM5-206ENST00000409987 TXKP42681 527 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 HABP2Q14520 560 aaPredicted RBP6.21□□□□□ -1.42
LSM5-206ENST00000409987 CRB2Q5IJ48 1285 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 FAM83BQ5T0W9 1011 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 DRICH1Q6PGQ1 229 aaPredicted RBP6.21□□□□□ -1.42
LSM5-206ENST00000409987 ZNF783Q6ZMS7 281 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 LCNL1Q6ZST4 164 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 SYT12Q8IV01 421 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 D2HGDHQ8N465 521 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 FITM2Q8N6M3 262 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 MB21D1Q8N884 522 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 OR10H5Q8NGA6 315 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 KIAA1191Q96A73 305 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 TRIM43Q96BQ3 446 aaPredicted RBP6.21□□□□□ -1.42
LSM5-206ENST00000409987 KLHL32Q96NJ5 620 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 KRTAP4-9Q9BYQ8 210 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.21□□□□□ -1.42
LSM5-206ENST00000409987 XYLT2Q9H1B5 865 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 GPRC5BQ9NZH0 403 aa6.21□□□□□ -1.42
LSM5-206ENST00000409987 DRGXA6NNA5 263 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 E9PLN8 166 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 TBC1D4O60343 1298 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 MFAP3LO75121 409 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 IPO13O94829 963 aaKnown RBP6.2□□□□□ -1.42
LSM5-206ENST00000409987 UNC5CO95185 931 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 PLATP00750 562 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 ANXA1P04083 346 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 GNAI2P04899 355 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 PARP1P09874 1014 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms