RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 CYP4F22Q6NT55 531 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 CCDC137Q6PK04 289 aaKnown RBP21.09■□□□□ 0.97
LIMS2-207ENST00000409808 RNF25Q96BH1 459 aaPredicted RBP21.09■□□□□ 0.97
LIMS2-207ENST00000409808 CCDC127Q96BQ5 260 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 C18orf8Q96DM3 657 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 POP1Q99575 1024 aaKnown RBP21.09■□□□□ 0.97
LIMS2-207ENST00000409808 KDM4CQ9H3R0 1056 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 ZFYVE28Q9HCC9 887 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 NOCTQ9UK39 431 aaKnown RBP21.09■□□□□ 0.97
LIMS2-207ENST00000409808 PCDHA3Q9Y5H8 950 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 ZNF236Q9UL36 1845 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 TTLL13PA6NNM8 815 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 RGS16O15492 202 aaPredicted RBP21.09■□□□□ 0.97
LIMS2-207ENST00000409808 HBP1O60381 514 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 RARGP13631 454 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 INSRRP14616 1297 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 LIG4P49917 911 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 MXI1P50539 228 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 CLCN3P51790 818 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 INHBEP58166 350 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 LAMTOR4Q0VGL1 99 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 STRN3Q13033 797 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 QPCTQ16769 361 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 C12orf50Q8NA57 414 aaPredicted RBP21.09■□□□□ 0.97
LIMS2-207ENST00000409808 OR6J1Q8NGC5 347 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 EPS8L1Q8TE68 723 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 KRT35Q92764 455 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 TARS2Q9BW92 718 aaKnown RBP21.09■□□□□ 0.97
LIMS2-207ENST00000409808 PLVAPQ9BX97 442 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 HAPLN2Q9GZV7 340 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 SLC5A4Q9NY91 659 aa21.09■□□□□ 0.97
LIMS2-207ENST00000409808 IGKV6-21A0A0C4DH24 114 aa21.08■□□□□ 0.97
LIMS2-207ENST00000409808 CHRNB2P17787 502 aa21.08■□□□□ 0.97
LIMS2-207ENST00000409808 SLC26A2P50443 739 aa21.08■□□□□ 0.97
LIMS2-207ENST00000409808 MNAT1P51948 309 aa21.08■□□□□ 0.97
LIMS2-207ENST00000409808 MESDQ14696 234 aa21.08■□□□□ 0.97
LIMS2-207ENST00000409808 IER5Q5VY09 327 aa21.08■□□□□ 0.97
LIMS2-207ENST00000409808 SLC13A5Q86YT5 568 aaPredicted RBP21.08■□□□□ 0.97
LIMS2-207ENST00000409808 EMID1Q96A84 441 aaPredicted RBP21.08■□□□□ 0.97
LIMS2-207ENST00000409808 FAM84AQ96KN4 292 aa21.08■□□□□ 0.97
LIMS2-207ENST00000409808 CCDC114Q96M63 670 aa21.08■□□□□ 0.97
LIMS2-207ENST00000409808 C16orf70Q9BSU1 422 aa21.08■□□□□ 0.97
LIMS2-207ENST00000409808 YY1AP1Q9H869 796 aa21.08■□□□□ 0.97
LIMS2-207ENST00000409808 SIP14410 1827 aa21.08■□□□□ 0.96
LIMS2-207ENST00000409808 H0YCG3 227 aa21.07■□□□□ 0.96
LIMS2-207ENST00000409808 ASAP2O43150 1006 aa21.07■□□□□ 0.96
LIMS2-207ENST00000409808 RASSF9O75901 435 aa21.07■□□□□ 0.96
LIMS2-207ENST00000409808 SHBGP04278 402 aa21.07■□□□□ 0.96
LIMS2-207ENST00000409808 COILP38432 576 aaPredicted RBP21.07■□□□□ 0.96
LIMS2-207ENST00000409808 RPL21P46778 160 aaKnown RBP21.07■□□□□ 0.96
LIMS2-207ENST00000409808 EFCAB12Q6NXP0 572 aa21.07■□□□□ 0.96
LIMS2-207ENST00000409808 RHPN2Q8IUC4 686 aa21.07■□□□□ 0.96
LIMS2-207ENST00000409808 PPP1R13LQ8WUF5 828 aa21.07■□□□□ 0.96
LIMS2-207ENST00000409808 ART4Q93070 314 aa21.07■□□□□ 0.96
LIMS2-207ENST00000409808 PCDHB18PQ96TA0 734 aa21.07■□□□□ 0.96
LIMS2-207ENST00000409808 FAM213AQ9BRX8 229 aa21.07■□□□□ 0.96
LIMS2-207ENST00000409808 ROPN1BQ9BZX4 212 aaPredicted RBP21.07■□□□□ 0.96
LIMS2-207ENST00000409808 CCDC134Q9H6E4 229 aa21.07■□□□□ 0.96
LIMS2-207ENST00000409808 ROPN1Q9HAT0 212 aaPredicted RBP21.07■□□□□ 0.96
LIMS2-207ENST00000409808 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.07■□□□□ 0.96
LIMS2-207ENST00000409808 GTF3C4Q9UKN8 822 aa21.07■□□□□ 0.96
LIMS2-207ENST00000409808 ADCY3O60266 1144 aa21.07■□□□□ 0.96
LIMS2-207ENST00000409808 SGPL1O95470 568 aa21.07■□□□□ 0.96
LIMS2-207ENST00000409808 TNFAIP2Q03169 654 aa21.07■□□□□ 0.96
LIMS2-207ENST00000409808 SLC29A2Q14542 456 aa21.07■□□□□ 0.96
LIMS2-207ENST00000409808 RNF149Q8NC42 400 aa21.07■□□□□ 0.96
LIMS2-207ENST00000409808 SHC3Q92529 594 aa21.07■□□□□ 0.96
LIMS2-207ENST00000409808 USP6NLQ92738 828 aa21.07■□□□□ 0.96
LIMS2-207ENST00000409808 TMEM117Q9H0C3 514 aa21.07■□□□□ 0.96
LIMS2-207ENST00000409808 TOPORSQ9NS56 1045 aaPredicted RBP21.07■□□□□ 0.96
LIMS2-207ENST00000409808 ZSWIM8A7E2V4 1837 aa21.07■□□□□ 0.96
LIMS2-207ENST00000409808 TMEM88BA6NKF7 163 aa21.06■□□□□ 0.96
LIMS2-207ENST00000409808 TMEM110-MUSTN1A8MSY1 372 aa21.06■□□□□ 0.96
LIMS2-207ENST00000409808 MMP3P08254 477 aa21.06■□□□□ 0.96
LIMS2-207ENST00000409808 SREBF2Q12772 1141 aa21.06■□□□□ 0.96
LIMS2-207ENST00000409808 ANKRD20A8PQ5CZ79 823 aa21.06■□□□□ 0.96
LIMS2-207ENST00000409808 IQSEC1Q6DN90 963 aa21.06■□□□□ 0.96
LIMS2-207ENST00000409808 NOP9Q86U38 636 aaKnown RBP21.06■□□□□ 0.96
LIMS2-207ENST00000409808 CCDC50Q8IVM0 306 aa21.06■□□□□ 0.96
LIMS2-207ENST00000409808 SMC1BQ8NDV3 1235 aa21.06■□□□□ 0.96
LIMS2-207ENST00000409808 PSPC1Q8WXF1 523 aaKnown RBP21.06■□□□□ 0.96
LIMS2-207ENST00000409808 SLCO2A1Q92959 643 aa21.06■□□□□ 0.96
LIMS2-207ENST00000409808 OSBPL7Q9BZF2 842 aa21.06■□□□□ 0.96
LIMS2-207ENST00000409808 GJD2Q9UKL4 321 aa21.06■□□□□ 0.96
LIMS2-207ENST00000409808 DYNC1LI2O43237 492 aaPredicted RBP21.06■□□□□ 0.96
LIMS2-207ENST00000409808 PYGMP11217 842 aa21.06■□□□□ 0.96
LIMS2-207ENST00000409808 RWDD2BP57060 319 aa21.06■□□□□ 0.96
LIMS2-207ENST00000409808 TTC27Q6P3X3 843 aa21.06■□□□□ 0.96
LIMS2-207ENST00000409808 ANKS4BQ8N8V4 417 aa21.06■□□□□ 0.96
LIMS2-207ENST00000409808 ZNF564Q8TBZ8 553 aaPredicted RBP21.06■□□□□ 0.96
LIMS2-207ENST00000409808 ZNF317Q96PQ6 595 aaPredicted RBP21.06■□□□□ 0.96
LIMS2-207ENST00000409808 PPP1R16BQ96T49 567 aa21.06■□□□□ 0.96
LIMS2-207ENST00000409808 LRRC19Q9H756 370 aa21.06■□□□□ 0.96
LIMS2-207ENST00000409808 KLC4Q9NSK0 619 aa21.06■□□□□ 0.96
LIMS2-207ENST00000409808 ANKFY1Q9P2R3 1169 aa21.06■□□□□ 0.96
LIMS2-207ENST00000409808 KCNG1Q9UIX4 513 aa21.06■□□□□ 0.96
LIMS2-207ENST00000409808 COQ4Q9Y3A0 265 aa21.06■□□□□ 0.96
LIMS2-207ENST00000409808 H3BRB1 525 aa21.05■□□□□ 0.96
LIMS2-207ENST00000409808 TNPO2O14787 897 aaKnown RBP21.05■□□□□ 0.96
LIMS2-207ENST00000409808 SPOPO43791 374 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms