RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 LINC00854A0A1B0GVQ3 168 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 NDUFA10O95299 355 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 TAL1P17542 331 aaPredicted RBP8.82□□□□□ -1
SCN9A-203ENST00000409672 KIF23Q02241 960 aaPredicted RBP8.82□□□□□ -1
SCN9A-203ENST00000409672 ZNF177Q13360 481 aaPredicted RBP8.82□□□□□ -1
SCN9A-203ENST00000409672 BRIP1Q9BX63 1249 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 ZNF556Q9HAH1 456 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 IQCMA0A1B0GVH7 501 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 NBNO60934 754 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 ABCB1P08183 1280 aaPredicted RBP8.82□□□□□ -1
SCN9A-203ENST00000409672 KRT7P08729 469 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 SFNP31947 248 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 GALNTL6Q49A17 601 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 KRT78Q8N1N4 520 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 FBXO32Q969P5 355 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 ATMINO43313 823 aaPredicted RBP8.81□□□□□ -1
SCN9A-203ENST00000409672 GSTM1P09488 218 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 BTNL9Q6UXG8 535 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 TEX9Q8N6V9 391 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 MYOCQ99972 504 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 TASP1Q9H6P5 420 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 RAB6BQ9NRW1 208 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 VTI1BQ9UEU0 232 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 LIMA1Q9UHB6 759 aaKnown RBP8.81□□□□□ -1
SCN9A-203ENST00000409672 PLA2G4CQ9UP65 541 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 KIAA0556O60303 1618 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 ZBTB39O15060 712 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 TCF7P36402 384 aaPredicted RBP8.81□□□□□ -1
SCN9A-203ENST00000409672 USP10Q14694 798 aaKnown RBP8.81□□□□□ -1
SCN9A-203ENST00000409672 ATF7IP2Q5U623 682 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 CLEC4FQ8N1N0 589 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 METTL5Q9NRN9 209 aaKnown RBP8.81□□□□□ -1
SCN9A-203ENST00000409672 MID2Q9UJV3 735 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 ENO1P06733 434 aaKnown RBP8.81□□□□□ -1
SCN9A-203ENST00000409672 ENO3P13929 434 aaPredicted RBP8.81□□□□□ -1
SCN9A-203ENST00000409672 PTPN7P35236 360 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 ALCAMQ13740 583 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 NCOA4Q13772 614 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 ZMAT2Q96NC0 199 aaKnown RBP8.81□□□□□ -1
SCN9A-203ENST00000409672 WDCPQ9H6R7 721 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 IPPQ9Y573 584 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 TARSL2A2RTX5 802 aaKnown RBP8.81□□□□□ -1
SCN9A-203ENST00000409672 CYTH1Q15438 398 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 FNDC3BQ53EP0 1204 aaKnown RBP8.81□□□□□ -1
SCN9A-203ENST00000409672 ZC2HC1CQ53FD0 456 aaPredicted RBP8.81□□□□□ -1
SCN9A-203ENST00000409672 HORMAD1Q86X24 394 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 ZFP69BQ9UJL9 534 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 PCDHB9Q9Y5E1 797 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 NLRP1Q9C000 1473 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 C3orf70A6NLC5 250 aaPredicted RBP8.81□□□□□ -1
SCN9A-203ENST00000409672 C16orf59Q7L2K0 433 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 C16orf62Q7Z3J2 963 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 PDGFDQ9GZP0 370 aaPredicted RBP8.81□□□□□ -1
SCN9A-203ENST00000409672 XPO7Q9UIA9 1087 aaKnown RBP8.81□□□□□ -1
SCN9A-203ENST00000409672 ABCC2Q92887 1545 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 PRR23D1E9PI22 279 aaPredicted RBP8.81□□□□□ -1
SCN9A-203ENST00000409672 PRR23D2P0DMB1 279 aaPredicted RBP8.81□□□□□ -1
SCN9A-203ENST00000409672 PRKCEQ02156 737 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 SV2CQ496J9 727 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 FSCBQ5H9T9 825 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 LUZP2Q86TE4 346 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 KDM5CP41229 1560 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 RHOBTB1O94844 696 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 TP53BP2Q13625 1128 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 RELTQ969Z4 430 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 THAP9Q9H5L6 903 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 INSRP06213 1382 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 KRT20P35900 424 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 GRIN1Q05586 938 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 AP3B2Q13367 1082 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 CAMK2GQ13555 558 aaPredicted RBP8.81□□□□□ -1
SCN9A-203ENST00000409672 OTOAQ7RTW8 1153 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.81□□□□□ -1
SCN9A-203ENST00000409672 C18orf8Q96DM3 657 aa8.81□□□□□ -1
SCN9A-203ENST00000409672 DCP1AQ9NPI6 582 aaPredicted RBP8.81□□□□□ -1
SCN9A-203ENST00000409672 TCEA1P23193 301 aaKnown RBP8.8□□□□□ -1
SCN9A-203ENST00000409672 KDSRQ06136 332 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 VAC14Q08AM6 782 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 KYNUQ16719 465 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 NT5DC3Q86UY8 548 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 LEMD2Q8NC56 503 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 MTFMTQ96DP5 389 aaKnown RBP8.8□□□□□ -1
SCN9A-203ENST00000409672 COLEC11Q9BWP8 271 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 PADI4Q9UM07 663 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 LZTS1Q9Y250 596 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 PSMD12O00232 456 aaPredicted RBP8.8□□□□□ -1
SCN9A-203ENST00000409672 AP1G2O75843 785 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 CTSEP14091 401 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 PDGFRAP16234 1089 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 MDM2Q00987 491 aaPredicted RBP8.8□□□□□ -1
SCN9A-203ENST00000409672 EFEMP1Q12805 493 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 LINC00116Q8NCU8 138 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 TBC1D16Q8TBP0 767 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 NEK9Q8TD19 979 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 ZFATQ9P243 1243 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 ABCA5Q8WWZ7 1642 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 CCDC151A5D8V7 595 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 ATP1A3P13637 1013 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 YWHAZP63104 245 aaKnown RBP8.8□□□□□ -1
SCN9A-203ENST00000409672 OR9Q1Q8NGQ5 310 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms