RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 LCORLQ8N3X6 602 aa11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 MORC4Q8TE76 937 aa11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 ITPKCQ96DU7 683 aa11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 ARHGAP39Q9C0H5 1083 aa11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 PPCSQ9HAB8 311 aa11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 PICK1Q9NRD5 415 aa11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 PLK2Q9NYY3 685 aa11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 SENP1Q9P0U3 644 aa11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 ARMCX3Q9UH62 379 aaPredicted RBP11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 DBR1Q9UK59 544 aaKnown RBP11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 SYNGAP1Q96PV0 1343 aa11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 EIF4E1BA6NMX2 242 aaKnown RBP11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 GSC2O15499 205 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 CDH16O75309 829 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 ASMTLO95671 621 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 TMEM253P0C7T8 217 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 MYBL1P10243 752 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 TARSP26639 723 aaKnown RBP11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 OXCT1P55809 520 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 PLCB3Q01970 1234 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 DSG1Q02413 1049 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 HSP90AA5PQ58FG0 334 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 ACSBG2Q5FVE4 666 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 DPY19L2P1Q6NXN4 242 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 AAGABQ6PD74 315 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 B3GNT6Q6ZMB0 384 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 SYDE1Q6ZW31 735 aaPredicted RBP11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 CCDC65Q8IXS2 484 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 C12orf50Q8NA57 414 aaPredicted RBP11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 DENND1AQ8TEH3 1009 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 SDR42E1Q8WUS8 393 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 DDX12PQ92771 950 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 STMN2Q93045 179 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 LSM14BQ9BX40 385 aaKnown RBP11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 CADM1Q9BY67 442 aaKnown RBP11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 NT5C3AQ9H0P0 336 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 EURLQ9NYK6 297 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 PI4KBQ9UBF8 816 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 PCDHA4Q9UN74 947 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 SLC4A4Q9Y6R1 1079 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 PFASO15067 1338 aa11.27□□□□□ -0.61
NIF3L1-204ENST00000409357 A0A0G2JLL6 359 aaPredicted RBP11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 MAGEB6P1A0A0J9YX57 407 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 FAM47DPA6NHR8 397 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 SMIM22K7EJ46 135 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 PDHXO00330 501 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 TNKSO95271 1327 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 GDF11O95390 407 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 ALDH2P05091 517 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 CYP2C8P10632 490 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 FCER1AP12319 257 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 PLCG1P19174 1290 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 CAP2P40123 477 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 RPL21P46778 160 aaKnown RBP11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 DNA2P51530 1060 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 PTK2Q05397 1052 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 MPP2Q14168 576 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 STAT4Q14765 748 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 PDK4Q16654 411 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 MAP3K21Q5TCX8 1036 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 PDE4DIPQ5VU43 2346 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 OTOP1Q7RTM1 612 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 ZNF571Q7Z3V5 609 aaPredicted RBP11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 PRRT2Q7Z6L0 340 aaPredicted RBP11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 TDRPQ86YL5 185 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 NUP93Q8N1F7 819 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 RFFLQ8WZ73 363 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 PTCD3Q96EY7 689 aaKnown RBP11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 ADGRA2Q96PE1 1338 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 ZSCAN10Q96SZ4 725 aaPredicted RBP11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 ECSITQ9BQ95 431 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 CORO1BQ9BR76 489 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 OXCT2Q9BYC2 517 aaPredicted RBP11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 FOXP3Q9BZS1 431 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 UNC45AQ9H3U1 944 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 TMEM165Q9HC07 324 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 SSU72Q9NP77 194 aaKnown RBP11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 FAIMQ9NVQ4 179 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 PHTF1Q9UMS5 762 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 SMG5Q9UPR3 1016 aaKnown RBP11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 TMEM98Q9Y2Y6 226 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 SNX24Q9Y343 169 aa11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 CTDP1Q9Y5B0 961 aaPredicted RBP11.26□□□□□ -0.61
NIF3L1-204ENST00000409357 H0Y3Z8 333 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 NKRFO15226 690 aaKnown RBP eCLIP11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 SLC26A4O43511 780 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 PRKAB2O43741 272 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 TTC4O95801 387 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 ABHD2P08910 425 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 PORP16435 677 aaPredicted RBP11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 VCAM1P19320 739 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 ITIH2P19823 946 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 CTGFP29279 349 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 FOXN2P32314 431 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 ADARP55265 1226 aaKnown RBP11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 SP3Q02447 781 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 DCTN2Q13561 401 aaKnown RBP11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 SPARCL1Q14515 664 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 LRRC14Q15048 493 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms