RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 TRAPPC11Q7Z392 1133 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 CEP57Q86XR8 500 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 TMC2Q8TDI7 906 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 HLA-CQ95604 372 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 PPP2R3CQ969Q6 453 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 SENP8Q96LD8 212 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 THEGQ9P2T0 379 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 COG5Q9UP83 839 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 NUB1Q9Y5A7 615 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 PSMA7O14818 248 aa17.14■□□□□ 0.33
GDPD3-202ENST00000406256 TRAPPC3O43617 180 aa17.14■□□□□ 0.33
GDPD3-202ENST00000406256 NCK2O43639 380 aa17.14■□□□□ 0.33
GDPD3-202ENST00000406256 CST3P01034 146 aaPredicted RBP17.14■□□□□ 0.33
GDPD3-202ENST00000406256 C4BPAP04003 597 aaKnown RBP17.14■□□□□ 0.33
GDPD3-202ENST00000406256 TMEM191BP0C7N4 346 aa17.14■□□□□ 0.33
GDPD3-202ENST00000406256 DUOXA2Q1HG44 320 aa17.14■□□□□ 0.33
GDPD3-202ENST00000406256 TDRD10Q5VZ19 366 aaKnown RBP17.14■□□□□ 0.33
GDPD3-202ENST00000406256 KIAA1841Q6NSI8 718 aa17.14■□□□□ 0.33
GDPD3-202ENST00000406256 LILRA6Q6PI73 481 aa17.14■□□□□ 0.33
GDPD3-202ENST00000406256 SYCE2Q6PIF2 218 aa17.14■□□□□ 0.33
GDPD3-202ENST00000406256 LRRC52Q8N7C0 313 aa17.14■□□□□ 0.33
GDPD3-202ENST00000406256 CACTINQ8WUQ7 758 aaKnown RBP17.14■□□□□ 0.33
GDPD3-202ENST00000406256 NELFBQ8WX92 580 aa17.14■□□□□ 0.33
GDPD3-202ENST00000406256 ANKRD36BP1Q96IX9 119 aa17.14■□□□□ 0.33
GDPD3-202ENST00000406256 MKNK1Q9BUB5 465 aa17.14■□□□□ 0.33
GDPD3-202ENST00000406256 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.14■□□□□ 0.33
GDPD3-202ENST00000406256 AGAP1Q9UPQ3 857 aa17.14■□□□□ 0.33
GDPD3-202ENST00000406256 CTNND2Q9UQB3 1225 aa17.14■□□□□ 0.33
GDPD3-202ENST00000406256 SSX2IPQ9Y2D8 614 aa17.14■□□□□ 0.33
GDPD3-202ENST00000406256 TIMM13Q9Y5L4 95 aaPredicted RBP17.14■□□□□ 0.33
GDPD3-202ENST00000406256 BACE2Q9Y5Z0 518 aa17.14■□□□□ 0.33
GDPD3-202ENST00000406256 NOTCH4Q99466 2003 aa17.14■□□□□ 0.33
GDPD3-202ENST00000406256 BDP1A6H8Y1 2624 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 PTPRDP23468 1912 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 H3BQ06 376 aaPredicted RBP17.13■□□□□ 0.33
GDPD3-202ENST00000406256 VNN1O95497 513 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 CYP11A1P05108 521 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 TNNI1P19237 187 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 TYMPP19971 482 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 KCNA5P22460 613 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 RPL13P26373 211 aaKnown RBP17.13■□□□□ 0.33
GDPD3-202ENST00000406256 CA8P35219 290 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 PPP1R2P41236 205 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 TAF6P49848 677 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 ENPEPQ07075 957 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 DPCR1Q3MIW9 517 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 KLHL10Q6JEL2 608 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 LLGL2Q6P1M3 1020 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 LIMS2Q7Z4I7 341 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 FAM186BQ8IYM0 893 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 CSGALNACT2Q8N6G5 542 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.13■□□□□ 0.33
GDPD3-202ENST00000406256 FNBP1Q96RU3 617 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 RTP3Q9BQQ7 232 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 EMILIN2Q9BXX0 1053 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 XYLT2Q9H1B5 865 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 TMEM63CQ9P1W3 806 aa17.13■□□□□ 0.33
GDPD3-202ENST00000406256 KPNA7A9QM74 516 aa17.12■□□□□ 0.33
GDPD3-202ENST00000406256 TGM5O43548 720 aa17.12■□□□□ 0.33
GDPD3-202ENST00000406256 OAZ2O95190 189 aa17.12■□□□□ 0.33
GDPD3-202ENST00000406256 MBD3O95983 291 aa17.12■□□□□ 0.33
GDPD3-202ENST00000406256 TRIM49P0CI25 452 aa17.12■□□□□ 0.33
GDPD3-202ENST00000406256 TRIM49CP0CI26 452 aa17.12■□□□□ 0.33
GDPD3-202ENST00000406256 PSMC2P35998 433 aaKnown RBP17.12■□□□□ 0.33
GDPD3-202ENST00000406256 NDUFV1P49821 464 aa17.12■□□□□ 0.33
GDPD3-202ENST00000406256 STX17P56962 302 aa17.12■□□□□ 0.33
GDPD3-202ENST00000406256 FKBP3Q00688 224 aaKnown RBP17.12■□□□□ 0.33
GDPD3-202ENST00000406256 PPP3CAQ08209 521 aa17.12■□□□□ 0.33
GDPD3-202ENST00000406256 BFSP1Q12934 665 aa17.12■□□□□ 0.33
GDPD3-202ENST00000406256 BMS1Q14692 1282 aaKnown RBP17.12■□□□□ 0.33
GDPD3-202ENST00000406256 LEXMQ3ZCV2 418 aa17.12■□□□□ 0.33
GDPD3-202ENST00000406256 ZACNQ401N2 412 aa17.12■□□□□ 0.33
GDPD3-202ENST00000406256 SLC8B1Q6J4K2 584 aa17.12■□□□□ 0.33
GDPD3-202ENST00000406256 ANKRD54Q6NXT1 300 aa17.12■□□□□ 0.33
GDPD3-202ENST00000406256 ANKS3Q6ZW76 656 aa17.12■□□□□ 0.33
GDPD3-202ENST00000406256 GLYCTKQ8IVS8 523 aa17.12■□□□□ 0.33
GDPD3-202ENST00000406256 S1PR5Q9H228 398 aa17.12■□□□□ 0.33
GDPD3-202ENST00000406256 FBXL5Q9UKA1 691 aa17.12■□□□□ 0.33
GDPD3-202ENST00000406256 FRMD4BQ9Y2L6 1034 aa17.12■□□□□ 0.33
GDPD3-202ENST00000406256 DOCK8Q8NF50 2099 aa17.11■□□□□ 0.33
GDPD3-202ENST00000406256 CUL9Q8IWT3 2517 aa17.11■□□□□ 0.33
GDPD3-202ENST00000406256 FSD2A1L4K1 749 aa17.11■□□□□ 0.33
GDPD3-202ENST00000406256 CETN3O15182 167 aa17.11■□□□□ 0.33
GDPD3-202ENST00000406256 SLC16A3O15427 465 aaKnown RBP17.11■□□□□ 0.33
GDPD3-202ENST00000406256 PAPLNO95428 1278 aa17.11■□□□□ 0.33
GDPD3-202ENST00000406256 TNNC2P02585 160 aa17.11■□□□□ 0.33
GDPD3-202ENST00000406256 ADH1AP07327 375 aa17.11■□□□□ 0.33
GDPD3-202ENST00000406256 PAX3P23760 479 aa17.11■□□□□ 0.33
GDPD3-202ENST00000406256 KLRC2P26717 231 aa17.11■□□□□ 0.33
GDPD3-202ENST00000406256 KCNQ1P51787 676 aa17.11■□□□□ 0.33
GDPD3-202ENST00000406256 VAMP7P51809 220 aa17.11■□□□□ 0.33
GDPD3-202ENST00000406256 RBP5P82980 135 aa17.11■□□□□ 0.33
GDPD3-202ENST00000406256 PAK1Q13153 545 aa17.11■□□□□ 0.33
GDPD3-202ENST00000406256 STIM1Q13586 685 aa17.11■□□□□ 0.33
GDPD3-202ENST00000406256 RAB33AQ14088 237 aa17.11■□□□□ 0.33
GDPD3-202ENST00000406256 PDXDC1Q6P996 788 aa17.11■□□□□ 0.33
GDPD3-202ENST00000406256 INTS8Q75QN2 995 aaKnown RBP17.11■□□□□ 0.33
GDPD3-202ENST00000406256 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.11■□□□□ 0.33
GDPD3-202ENST00000406256 SMRP1Q8NCR6 262 aa17.11■□□□□ 0.33
GDPD3-202ENST00000406256 ZNF560Q96MR9 790 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms