RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 HK3P52790 923 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 RAB1AP62820 205 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 ATP8B2P98198 1209 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 BTKQ06187 659 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 SP140Q13342 867 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 DGKKQ5KSL6 1271 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 GJC2Q5T442 439 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 THEMIS2Q5TEJ8 643 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 ANO1Q5XXA6 986 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 PPP4R3AQ6IN85 833 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 MIGA2Q7L4E1 593 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 TTC7BQ86TV6 843 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 FAM9AQ8IZU1 332 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 OR2C3Q8N628 320 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 AMER2Q8N7J2 671 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 ANKRD42Q8N9B4 389 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 OR10H5Q8NGA6 315 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 ZNF483Q8TF39 744 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 POF1BQ8WVV4 589 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 LENG9Q96B70 501 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 RGMAQ96B86 450 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 RIPOR3Q96MK2 946 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 DMRTA2Q96SC8 542 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 WDR12Q9GZL7 423 aaKnown RBP6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 LUZP4Q9P127 313 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 DKK2Q9UBU2 259 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 HS3ST4Q9Y661 456 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 HS3ST3A1Q9Y663 406 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 FAM171A2A8MVW0 826 aa6.03□□□□□ -1.44
HMGB1P13-201ENST00000406019 MGEA5O60502 916 aa6.03□□□□□ -1.44
HMGB1P13-201ENST00000406019 FTLP02792 175 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P13-201ENST00000406019 AMY1AP04745 511 aa6.03□□□□□ -1.44
HMGB1P13-201ENST00000406019 PCSK1P29120 753 aa6.03□□□□□ -1.44
HMGB1P13-201ENST00000406019 NKX6-1P78426 367 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P13-201ENST00000406019 FAM189BP81408 668 aa6.03□□□□□ -1.44
HMGB1P13-201ENST00000406019 POU5F1BQ06416 359 aa6.03□□□□□ -1.44
HMGB1P13-201ENST00000406019 PCSK4Q6UW60 755 aa6.03□□□□□ -1.44
HMGB1P13-201ENST00000406019 PDZD4Q76G19 769 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P13-201ENST00000406019 MRGPREQ86SM8 312 aa6.03□□□□□ -1.44
HMGB1P13-201ENST00000406019 NKAPQ8N5F7 415 aaKnown RBP6.03□□□□□ -1.44
HMGB1P13-201ENST00000406019 FBXO18Q8NFZ0 1043 aa6.03□□□□□ -1.44
HMGB1P13-201ENST00000406019 APIPQ96GX9 242 aa6.03□□□□□ -1.44
HMGB1P13-201ENST00000406019 SORCS2Q96PQ0 1159 aa6.03□□□□□ -1.44
HMGB1P13-201ENST00000406019 MMRN2Q9H8L6 949 aa6.03□□□□□ -1.44
HMGB1P13-201ENST00000406019 CASS4Q9NQ75 786 aa6.03□□□□□ -1.44
HMGB1P13-201ENST00000406019 SLC2A4RGQ9NR83 387 aa6.03□□□□□ -1.44
HMGB1P13-201ENST00000406019 PCDHA13Q9Y5I0 950 aa6.03□□□□□ -1.44
HMGB1P13-201ENST00000406019 CFAP69A5D8W1 941 aa6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 MARCH11A6NNE9 402 aa6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 PRR5-ARHGAP8B1AHC4 643 aa6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 F5H423 210 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 NBNO60934 754 aa6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 RPLP2P05387 115 aaKnown RBP6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 RPL17P18621 184 aaKnown RBP6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 KRT4P19013 534 aa6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 FPR1P21462 350 aa6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 NOGQ13253 232 aa6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 MTM1Q13496 603 aa6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 TUBB8Q3ZCM7 444 aa6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 FAM102AQ5T9C2 384 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 PQLC1Q8N2U9 271 aa6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 ZGPATQ8N5A5 531 aaKnown RBP6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 RNF169Q8NCN4 708 aa6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 CASKIN2Q8WXE0 1202 aa6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 LARP4BQ92615 738 aaKnown RBP6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 ANKS1AQ92625 1134 aa6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 NT5C1BQ96P26 610 aa6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 TEX101Q9BY14 249 aa6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 FAM30AQ9NZY2 134 aa6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 SLC23A1Q9UHI7 598 aa6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 SORCS3Q9UPU3 1222 aa6.02□□□□□ -1.45
HMGB1P13-201ENST00000406019 ENDOD1O94919 500 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 PTPN7P35236 360 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 IL6STP40189 918 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 GDF5P43026 501 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 ABHD18Q0P651 414 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 NOMO1Q15155 1222 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 AFMIDQ63HM1 303 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 OTUD7BQ6GQQ9 843 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 LRRC55Q6ZSA7 311 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 ZNF627Q7L945 461 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 ZFPM1Q8IX07 1006 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 DRC7Q8IY82 874 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 ZNF276Q8N554 614 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 CPT1CQ8TCG5 803 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 SLC25A43Q8WUT9 341 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 ZC3H10Q96K80 434 aaKnown RBP6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 MRGPRX4Q96LA9 322 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 C7orf25Q9BPX7 421 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 CRB3Q9BUF7 120 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 SLC46A2Q9BY10 475 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 LRRC27Q9C0I9 530 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 EPC1Q9H2F5 836 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 LDAHQ9H6V9 325 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 ZMAT3Q9HA38 289 aaKnown RBP6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 LANCL2Q9NS86 450 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 CLCA2Q9UQC9 943 aa6.01□□□□□ -1.45
HMGB1P13-201ENST00000406019 MORC2Q9Y6X9 1032 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms