RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 GAD1Q99259 594 aa9.63□□□□□ -0.87
LIG4-202ENST00000405925 SEPT5Q99719 369 aaPredicted RBP9.63□□□□□ -0.87
LIG4-202ENST00000405925 ADAM2Q99965 735 aa9.63□□□□□ -0.87
LIG4-202ENST00000405925 DNAJC17Q9NVM6 304 aaKnown RBP9.63□□□□□ -0.87
LIG4-202ENST00000405925 ABI2Q9NYB9 513 aaPredicted RBP9.63□□□□□ -0.87
LIG4-202ENST00000405925 SAMD15Q9P1V8 674 aa9.63□□□□□ -0.87
LIG4-202ENST00000405925 ATP8A1Q9Y2Q0 1164 aa9.63□□□□□ -0.87
LIG4-202ENST00000405925 SIPA1L3O60292 1781 aaPredicted RBP9.63□□□□□ -0.87
LIG4-202ENST00000405925 LRRIQ3A6PVS8 624 aaPredicted RBP9.63□□□□□ -0.87
LIG4-202ENST00000405925 CABYRO75952 493 aa9.63□□□□□ -0.87
LIG4-202ENST00000405925 C4AP0C0L4 1744 aa9.63□□□□□ -0.87
LIG4-202ENST00000405925 TMEM253P0C7T8 217 aa9.63□□□□□ -0.87
LIG4-202ENST00000405925 GBP1P32455 592 aa9.63□□□□□ -0.87
LIG4-202ENST00000405925 PTENP60484 403 aa9.63□□□□□ -0.87
LIG4-202ENST00000405925 DLG4P78352 724 aa9.63□□□□□ -0.87
LIG4-202ENST00000405925 MKRN4PQ13434 485 aaPredicted RBP9.63□□□□□ -0.87
LIG4-202ENST00000405925 NBPF20Q3BBV1 942 aa9.63□□□□□ -0.87
LIG4-202ENST00000405925 ELMSAN1Q6PJG2 1045 aa9.63□□□□□ -0.87
LIG4-202ENST00000405925 DNAAF3Q8N9W5 541 aa9.63□□□□□ -0.87
LIG4-202ENST00000405925 MBOAT7Q96N66 472 aa9.63□□□□□ -0.87
LIG4-202ENST00000405925 WNT8AQ9H1J5 351 aa9.63□□□□□ -0.87
LIG4-202ENST00000405925 CDT1Q9H211 546 aa9.63□□□□□ -0.87
LIG4-202ENST00000405925 DIS3Q9Y2L1 958 aaKnown RBP9.63□□□□□ -0.87
LIG4-202ENST00000405925 LOC102724159A0A0B4J2E5 919 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 RGS16O15492 202 aaPredicted RBP9.62□□□□□ -0.87
LIG4-202ENST00000405925 ADRB2P07550 413 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 FAM200BP0CF97 657 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 SMPD1P17405 629 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 CDK17Q00537 523 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 TAP1Q03518 808 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 PWP2Q15269 919 aaKnown RBP9.62□□□□□ -0.87
LIG4-202ENST00000405925 CCL14Q16627 93 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 CC2D1AQ6P1N0 951 aaPredicted RBP9.62□□□□□ -0.87
LIG4-202ENST00000405925 SLC47A2Q86VL8 602 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 ZNF677Q86XU0 584 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 DNAAF5Q86Y56 855 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 FAM84AQ96KN4 292 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 RNPC3Q96LT9 517 aaKnown RBP9.62□□□□□ -0.87
LIG4-202ENST00000405925 PARD6BQ9BYG5 372 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 THAP2Q9H0W7 228 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 TMEM39AQ9NV64 488 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 ANAPC5Q9UJX4 755 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 SNX24Q9Y343 169 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 TIMM13Q9Y5L4 95 aaPredicted RBP9.62□□□□□ -0.87
LIG4-202ENST00000405925 LRRC10BA6NIK2 292 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 UNCXA6NJT0 531 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 BNIP3LO60238 219 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 HOXC6P09630 235 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 ODC1P11926 461 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 BCAR1P56945 870 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 EFHC2Q5JST6 749 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 LGSNQ5TDP6 509 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 CROCCP2Q86T23 111 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 RYBPQ8N488 228 aaPredicted RBP9.62□□□□□ -0.87
LIG4-202ENST00000405925 SLC20A1Q8WUM9 679 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 BCAS3Q9H6U6 928 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 SLX4Q8IY92 1834 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 ADAMTS7Q9UKP4 1686 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 OPLAHO14841 1288 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 ATP2C2O75185 946 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 SEC31AO94979 1220 aaKnown RBP9.62□□□□□ -0.87
LIG4-202ENST00000405925 CDH8P55286 799 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 RTP1P59025 263 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 JADE1Q6IE81 842 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 CPLX4Q7Z7G2 160 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 ARHGEF19Q8IW93 802 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 DCP1BQ8IZD4 617 aaKnown RBP9.62□□□□□ -0.87
LIG4-202ENST00000405925 KAT5Q92993 513 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 LACRTQ9GZZ8 138 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 NSRP1Q9H0G5 558 aaKnown RBP9.62□□□□□ -0.87
LIG4-202ENST00000405925 PIDD1Q9HB75 910 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 GTF3C4Q9UKN8 822 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 SNX12Q9UMY4 172 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 NOC2LQ9Y3T9 749 aaKnown RBP9.62□□□□□ -0.87
LIG4-202ENST00000405925 DUSP10Q9Y6W6 482 aa9.62□□□□□ -0.87
LIG4-202ENST00000405925 ZNF185O15231 689 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 DUSP11O75319 330 aaKnown RBP9.61□□□□□ -0.87
LIG4-202ENST00000405925 PRPSAP1Q14558 356 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 BBS9Q3SYG4 887 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 LRRC31Q6UY01 552 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 ZNF571Q7Z3V5 609 aaPredicted RBP9.61□□□□□ -0.87
LIG4-202ENST00000405925 ADGRF2Q8IZF7 708 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 ELMOD1Q8N336 334 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 P3H4Q92791 437 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 CYFIP2Q96F07 1278 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 CALR3Q96L12 384 aaKnown RBP9.61□□□□□ -0.87
LIG4-202ENST00000405925 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.61□□□□□ -0.87
LIG4-202ENST00000405925 COLEC11Q9BWP8 271 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 PACSIN1Q9BY11 444 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 CELF4Q9BZC1 486 aaKnown RBP9.61□□□□□ -0.87
LIG4-202ENST00000405925 MAF1Q9H063 256 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 KCTD10Q9H3F6 313 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 TTC7AQ9ULT0 858 aaPredicted RBP9.61□□□□□ -0.87
LIG4-202ENST00000405925 TNFSF13BQ9Y275 285 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 ALG6Q9Y672 507 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 PRRG1O14668 218 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 SLC4A1P02730 911 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 ACO1P21399 889 aaKnown RBP9.61□□□□□ -0.87
LIG4-202ENST00000405925 COMTP21964 271 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 AXLP30530 894 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 224.9 ms