RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 NKD2Q969F2 451 aaPredicted RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 CDHR1Q96JP9 859 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 PCYT2Q99447 389 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 PPCSQ9HAB8 311 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 ARHGEF3Q9NR81 526 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 ZNF277Q9NRM2 450 aaPredicted RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 INTS9Q9NV88 658 aaKnown RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 SEPT11Q9NVA2 429 aaKnown RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 BCCIPQ9P287 314 aaKnown RBP eCLIP4.11□□□□□ -1.75
RTN4-209ENST00000405240 FARP1Q9Y4F1 1045 aaPredicted RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 FNDC1Q4ZHG4 1894 aaPredicted RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 LTBP3Q9NS15 1303 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 LDHAP00338 332 aaKnown RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 CALCAP01258 141 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 CREB1P16220 341 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 SOX10P56693 466 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 NLRP11P59045 1033 aaKnown RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 ACTR2P61160 394 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 TGFB2P61812 414 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 PRKCEQ02156 737 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 MGAT5Q09328 741 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 BAATQ14032 418 aaPredicted RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 ZYXQ15942 572 aaKnown RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 ODF2Q5BJF6 829 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 CATSPERGQ6ZRH7 1159 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 CEP128Q6ZU80 1094 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 SCYL3Q8IZE3 742 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 ZNF276Q8N554 614 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 CCHCR1Q8TD31 782 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 NSUN6Q8TEA1 469 aaKnown RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 MZB1Q8WU39 189 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 CPA5Q8WXQ8 436 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 POMGNT1Q8WZA1 660 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 CEP170P1Q96L14 293 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 PI4K2AQ9BTU6 479 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 FRMD8P1Q9BZ68 369 aaPredicted RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 ZNF518BQ9C0D4 1074 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 POLR3FQ9H1D9 316 aaPredicted RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 JPH1Q9HDC5 661 aaPredicted RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 SLC9A2Q9UBY0 812 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 TPX2Q9ULW0 747 aaKnown RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 AGAP1Q9UPQ3 857 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 USP15Q9Y4E8 981 aaPredicted RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 SCINQ9Y6U3 715 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 IGKV6-21A0A0C4DH24 114 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 GOLGA6L7A0A1B0GV03 622 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 E7ESA3 106 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 DNALI1O14645 258 aaPredicted RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 ALOX15BO15296 676 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 ASMTLO95671 621 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 ASS1P00966 412 aaKnown RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 ITGAVP06756 1048 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 RALAP11233 206 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 PTPRAP18433 802 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 NCALDP61601 193 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 NR1H3Q13133 447 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 CALCOCO2Q13137 446 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 MTMR2Q13614 643 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 MOGSQ13724 837 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 TMEM132BQ14DG7 1078 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 EMC2Q15006 297 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 MTFR1Q15390 333 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 LONRF1Q17RB8 773 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 SKIDA1Q1XH10 827 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 RNASEH2BQ5TBB1 312 aaKnown RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 ZNF772Q68DY9 489 aaPredicted RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 SCARA3Q6AZY7 606 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 NSMFQ6X4W1 530 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 ZPBP2Q6X784 338 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 POLNQ7Z5Q5 900 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 CPLX4Q7Z7G2 160 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 DNERQ8NFT8 737 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 CXorf38Q8TB03 319 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 SLC35B2Q8TB61 432 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 FEZF2Q8TBJ5 459 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 CCDC127Q96BQ5 260 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 ATG4CQ96DT6 458 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 SH2D3AQ9BRG2 576 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 FAM213AQ9BRX8 229 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 CENPHQ9H3R5 247 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 EBF2Q9HAK2 575 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 MRPL47Q9HD33 250 aaKnown RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 PTPRHQ9HD43 1115 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 C1orf112Q9NSG2 853 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 RNF146Q9NTX7 359 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 GEMIN8Q9NWZ8 242 aaKnown RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 PKD2L1Q9P0L9 805 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 NAALADL1Q9UQQ1 740 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.1□□□□□ -1.75
RTN4-209ENST00000405240 NUB1Q9Y5A7 615 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 SCN4AP35499 1836 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 TSC2P49815 1807 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 POLR2AP24928 1970 aaKnown RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 TMEM120BA0PK00 339 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 C19orf81C9J6K1 198 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 TYROBPO43914 113 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 WFS1O76024 890 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 ATP6V1G2O95670 118 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 WEE2P0C1S8 567 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 DPEP1P16444 411 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms