RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 MROH7Q68CQ1 1323 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 CCDC195A0A1B0GUA6 201 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 FDX1P10109 184 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 IRX4P78413 519 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 KDSRQ06136 332 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 ALCAMQ13740 583 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 PTK6Q13882 451 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 SNRNP35Q16560 246 aaKnown RBP10.12□□□□□ -0.79
SMC1B-202ENST00000404354 ZNF568Q3ZCX4 644 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 TXNRD3NBQ6F5E7 133 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 CLNKQ7Z7G1 428 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 CPXCR1Q8N123 301 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 SHKBP1Q8TBC3 707 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 TCP10LQ8TDR4 215 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 LRRN4Q8WUT4 740 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 C10orf82Q8WW14 230 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 JDP2Q8WYK2 163 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 STMN2Q93045 179 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 FAM161BQ96MY7 647 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 SHCBP1LQ9BZQ2 653 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.12□□□□□ -0.79
SMC1B-202ENST00000404354 PSMD10O75832 226 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 DCTN3O75935 186 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 HARSP12081 509 aaKnown RBP10.12□□□□□ -0.79
SMC1B-202ENST00000404354 AMPD1P23109 780 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 RAB27AP51159 221 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 YARSP54577 528 aaKnown RBP10.12□□□□□ -0.79
SMC1B-202ENST00000404354 RPL7AP62424 266 aaKnown RBP10.12□□□□□ -0.79
SMC1B-202ENST00000404354 NR1H3Q13133 447 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 STAT4Q14765 748 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 CLUL1Q15846 466 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 RASIP1Q5U651 963 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 SCARA3Q6AZY7 606 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 ACAD10Q6JQN1 1059 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 C4orf50Q6ZRC1 276 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 CCDC89Q8N998 374 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 ACER1Q8TDN7 264 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 MKL1Q969V6 931 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 MBOAT7Q96N66 472 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 NT5C1BQ96P26 610 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 WDR11Q9BZH6 1224 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 SERPINA10Q9UK55 444 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 GAKO14976 1311 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 CYP1A2P05177 515 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 IL1R1P14778 569 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 ATP2B4P23634 1241 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 NSFP46459 744 aaKnown RBP10.12□□□□□ -0.79
SMC1B-202ENST00000404354 CACNA2D1P54289 1103 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 MKRN3Q13064 507 aaKnown RBP10.12□□□□□ -0.79
SMC1B-202ENST00000404354 PPP2R5CQ13362 524 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 SMTNL2Q2TAL5 461 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 BBS9Q3SYG4 887 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 SEZ6Q53EL9 994 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 RINLQ6ZS11 566 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 MIER3Q7Z3K6 550 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 RBBP8NLQ8NC74 664 aaPredicted RBP10.12□□□□□ -0.79
SMC1B-202ENST00000404354 STARD13Q9Y3M8 1113 aa10.12□□□□□ -0.79
SMC1B-202ENST00000404354 RREB1Q92766 1687 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 ADGRA3Q8IWK6 1321 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 KIF3CO14782 793 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 ADRA2BP18089 450 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 HOXA7P31268 230 aaPredicted RBP10.11□□□□□ -0.79
SMC1B-202ENST00000404354 ABCB5Q2M3G0 1257 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 C11orf91Q3C1V1 193 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 KCNT1Q5JUK3 1230 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 FYB2Q5VWT5 728 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 FOXB2Q5VYV0 432 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 APOBEC3HQ6NTF7 200 aaKnown RBP10.11□□□□□ -0.79
SMC1B-202ENST00000404354 DDX27Q96GQ7 796 aaKnown RBP10.11□□□□□ -0.79
SMC1B-202ENST00000404354 CFAP57Q96MR6 1250 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 ETAA1Q9NY74 926 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 SCOCQ9UIL1 159 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 COL22A1Q8NFW1 1626 aaPredicted RBP10.11□□□□□ -0.79
SMC1B-202ENST00000404354 DOT1LQ8TEK3 1739 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 NAV1Q8NEY1 1877 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 hCG_2014768A0A024R1R8 64 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 TBX3O15119 743 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 HAUS5O94927 633 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 ENO1P06733 434 aaKnown RBP10.11□□□□□ -0.79
SMC1B-202ENST00000404354 ESRRAP11474 423 aaPredicted RBP10.11□□□□□ -0.79
SMC1B-202ENST00000404354 GZMAP12544 262 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 PTPN4P29074 926 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 MRPS35P82673 323 aaKnown RBP10.11□□□□□ -0.79
SMC1B-202ENST00000404354 CEP55Q53EZ4 464 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 SV2AQ7L0J3 742 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 ALYREFQ86V81 257 aaKnown RBP10.11□□□□□ -0.79
SMC1B-202ENST00000404354 KBTBD2Q8IY47 623 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 EFCAB3Q8N7B9 438 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 GRK7Q8WTQ7 553 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 GRAMD1AQ96CP6 724 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 FAM213AQ9BRX8 229 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 GINM1Q9NU53 330 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 KANSL3Q9P2N6 904 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 ARFGEF1Q9Y6D6 1849 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 FAM237BA0A1B0GVD1 139 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 H3BRJ5 948 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 TLR3O15455 904 aaKnown RBP10.11□□□□□ -0.79
SMC1B-202ENST00000404354 MAP3K6O95382 1288 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 FOSP01100 380 aaPredicted RBP10.11□□□□□ -0.79
SMC1B-202ENST00000404354 BGNP21810 368 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms