RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 FAM212AQ96EL1 285 aa16.68■□□□□ 0.26
TPM1-207ENST00000403994 RPP25Q9BUL9 199 aaKnown RBP16.68■□□□□ 0.26
TPM1-207ENST00000403994 MRPL44Q9H9J2 332 aaKnown RBP16.68■□□□□ 0.26
TPM1-207ENST00000403994 AVENQ9NQS1 362 aaPredicted RBP16.68■□□□□ 0.26
TPM1-207ENST00000403994 ARHGEF3Q9NR81 526 aa16.68■□□□□ 0.26
TPM1-207ENST00000403994 SLC2A4RGQ9NR83 387 aa16.68■□□□□ 0.26
TPM1-207ENST00000403994 OLFML3Q9NRN5 406 aa16.68■□□□□ 0.26
TPM1-207ENST00000403994 AFF4Q9UHB7 1163 aaKnown RBP16.68■□□□□ 0.26
TPM1-207ENST00000403994 AGO2Q9UKV8 859 aaKnown RBP16.68■□□□□ 0.26
TPM1-207ENST00000403994 DERAQ9Y315 318 aa16.68■□□□□ 0.26
TPM1-207ENST00000403994 TIMM13Q9Y5L4 95 aaPredicted RBP16.68■□□□□ 0.26
TPM1-207ENST00000403994 COL4A2P08572 1712 aa16.67■□□□□ 0.26
TPM1-207ENST00000403994 FRMD3A2A2Y4 597 aa16.67■□□□□ 0.26
TPM1-207ENST00000403994 H0Y858 1186 aa16.67■□□□□ 0.26
TPM1-207ENST00000403994 PI15O43692 258 aa16.67■□□□□ 0.26
TPM1-207ENST00000403994 OAZ2O95190 189 aa16.67■□□□□ 0.26
TPM1-207ENST00000403994 ADSSP30520 456 aa16.67■□□□□ 0.26
TPM1-207ENST00000403994 CASP5P51878 434 aa16.67■□□□□ 0.26
TPM1-207ENST00000403994 ADCY1Q08828 1119 aa16.67■□□□□ 0.26
TPM1-207ENST00000403994 KCNA1Q09470 495 aa16.67■□□□□ 0.26
TPM1-207ENST00000403994 STK38Q15208 465 aa16.67■□□□□ 0.26
TPM1-207ENST00000403994 L1TD1Q5T7N2 865 aaKnown RBP16.67■□□□□ 0.26
TPM1-207ENST00000403994 SLFN12LQ6IEE8 588 aa16.67■□□□□ 0.26
TPM1-207ENST00000403994 RNF19BQ6ZMZ0 732 aa16.67■□□□□ 0.26
TPM1-207ENST00000403994 LINC00301Q8NCQ3 95 aa16.67■□□□□ 0.26
TPM1-207ENST00000403994 KXD1Q9BQD3 176 aa16.67■□□□□ 0.26
TPM1-207ENST00000403994 FGFBP2Q9BYJ0 223 aa16.67■□□□□ 0.26
TPM1-207ENST00000403994 TBC1D17Q9HA65 648 aa16.67■□□□□ 0.26
TPM1-207ENST00000403994 TBC1D7Q9P0N9 293 aa16.67■□□□□ 0.26
TPM1-207ENST00000403994 MRPS23Q9Y3D9 190 aaKnown RBP16.67■□□□□ 0.26
TPM1-207ENST00000403994 C2CD2Q9Y426 696 aa16.67■□□□□ 0.26
TPM1-207ENST00000403994 ZNF292O60281 2723 aa16.67■□□□□ 0.26
TPM1-207ENST00000403994 SPTLC1O15269 473 aa16.66■□□□□ 0.26
TPM1-207ENST00000403994 GCNT3O95395 438 aa16.66■□□□□ 0.26
TPM1-207ENST00000403994 VNN2O95498 520 aa16.66■□□□□ 0.26
TPM1-207ENST00000403994 OR4Q2P0C623 313 aa16.66■□□□□ 0.26
TPM1-207ENST00000403994 ODC1P11926 461 aa16.66■□□□□ 0.26
TPM1-207ENST00000403994 IDEP14735 1019 aa16.66■□□□□ 0.26
TPM1-207ENST00000403994 TYMPP19971 482 aa16.66■□□□□ 0.26
TPM1-207ENST00000403994 LILRA4P59901 499 aa16.66■□□□□ 0.26
TPM1-207ENST00000403994 PRSS36Q5K4E3 855 aa16.66■□□□□ 0.26
TPM1-207ENST00000403994 C9orf57Q5W0N0 161 aa16.66■□□□□ 0.26
TPM1-207ENST00000403994 DSTYKQ6XUX3 929 aa16.66■□□□□ 0.26
TPM1-207ENST00000403994 CCDC105Q8IYK2 499 aa16.66■□□□□ 0.26
TPM1-207ENST00000403994 PDILTQ8N807 584 aa16.66■□□□□ 0.26
TPM1-207ENST00000403994 POMGNT1Q8WZA1 660 aa16.66■□□□□ 0.26
TPM1-207ENST00000403994 RTP3Q9BQQ7 232 aa16.66■□□□□ 0.26
TPM1-207ENST00000403994 CORO1BQ9BR76 489 aa16.66■□□□□ 0.26
TPM1-207ENST00000403994 ASB7Q9H672 318 aa16.66■□□□□ 0.26
TPM1-207ENST00000403994 GDE1Q9NZC3 331 aa16.66■□□□□ 0.26
TPM1-207ENST00000403994 MAFFQ9ULX9 164 aa16.66■□□□□ 0.26
TPM1-207ENST00000403994 YIPF1Q9Y548 306 aa16.66■□□□□ 0.26
TPM1-207ENST00000403994 ANO9A1A5B4 782 aa16.65■□□□□ 0.26
TPM1-207ENST00000403994 OR6C75A6NL08 312 aa16.65■□□□□ 0.26
TPM1-207ENST00000403994 NRG2O14511 850 aaPredicted RBP16.65■□□□□ 0.26
TPM1-207ENST00000403994 SPTLC2O15270 562 aa16.65■□□□□ 0.26
TPM1-207ENST00000403994 PTPN2P17706 415 aa16.65■□□□□ 0.26
TPM1-207ENST00000403994 RFX1P22670 979 aa16.65■□□□□ 0.26
TPM1-207ENST00000403994 TWF1Q12792 350 aa16.65■□□□□ 0.26
TPM1-207ENST00000403994 OVOS1Q6IE37 1185 aa16.65■□□□□ 0.26
TPM1-207ENST00000403994 POTEHQ6S545 545 aa16.65■□□□□ 0.26
TPM1-207ENST00000403994 CRELD2Q6UXH1 353 aaPredicted RBP16.65■□□□□ 0.26
TPM1-207ENST00000403994 USP37Q86T82 979 aa16.65■□□□□ 0.26
TPM1-207ENST00000403994 HSCBQ8IWL3 235 aa16.65■□□□□ 0.26
TPM1-207ENST00000403994 EFCAB13Q8IY85 973 aa16.65■□□□□ 0.26
TPM1-207ENST00000403994 ATOH1Q92858 354 aaPredicted RBP16.65■□□□□ 0.26
TPM1-207ENST00000403994 TCEAL4Q96EI5 215 aa16.65■□□□□ 0.26
TPM1-207ENST00000403994 ACCSQ96QU6 501 aa16.65■□□□□ 0.26
TPM1-207ENST00000403994 OXCT2Q9BYC2 517 aaPredicted RBP16.65■□□□□ 0.26
TPM1-207ENST00000403994 PANK2Q9BZ23 570 aa16.65■□□□□ 0.26
TPM1-207ENST00000403994 IRF2BPLQ9H1B7 796 aa16.65■□□□□ 0.26
TPM1-207ENST00000403994 CEP72Q9P209 647 aa16.65■□□□□ 0.26
TPM1-207ENST00000403994 EXOC7Q9UPT5 735 aa16.65■□□□□ 0.26
TPM1-207ENST00000403994 PATJQ8NI35 1801 aa16.65■□□□□ 0.26
TPM1-207ENST00000403994 PIRO00625 290 aa16.64■□□□□ 0.25
TPM1-207ENST00000403994 YEATS4O95619 227 aa16.64■□□□□ 0.25
TPM1-207ENST00000403994 CCR2P41597 374 aa16.64■□□□□ 0.25
TPM1-207ENST00000403994 POU5F1Q01860 360 aaKnown RBP16.64■□□□□ 0.25
TPM1-207ENST00000403994 E2F4Q16254 413 aa16.64■□□□□ 0.25
TPM1-207ENST00000403994 ELMOD1Q8N336 334 aa16.64■□□□□ 0.25
TPM1-207ENST00000403994 ZSWIM2Q8NEG5 633 aa16.64■□□□□ 0.25
TPM1-207ENST00000403994 SENP8Q96LD8 212 aa16.64■□□□□ 0.25
TPM1-207ENST00000403994 ZNF396Q96N95 335 aaPredicted RBP16.64■□□□□ 0.25
TPM1-207ENST00000403994 PGLYRP2Q96PD5 576 aa16.64■□□□□ 0.25
TPM1-207ENST00000403994 CRISPLD1Q9H336 500 aa16.64■□□□□ 0.25
TPM1-207ENST00000403994 RIF1Q5UIP0 2472 aaKnown RBP16.63■□□□□ 0.25
TPM1-207ENST00000403994 NUP210Q8TEM1 1887 aaPredicted RBP16.63■□□□□ 0.25
TPM1-207ENST00000403994 PPP6R2O75170 966 aa16.63■□□□□ 0.25
TPM1-207ENST00000403994 ECI2O75521 394 aa16.63■□□□□ 0.25
TPM1-207ENST00000403994 IL18RAPO95256 599 aa16.63■□□□□ 0.25
TPM1-207ENST00000403994 PAX3P23760 479 aa16.63■□□□□ 0.25
TPM1-207ENST00000403994 FCARP24071 287 aa16.63■□□□□ 0.25
TPM1-207ENST00000403994 WNT7BP56706 349 aa16.63■□□□□ 0.25
TPM1-207ENST00000403994 GPC5P78333 572 aa16.63■□□□□ 0.25
TPM1-207ENST00000403994 ALCAMQ13740 583 aa16.63■□□□□ 0.25
TPM1-207ENST00000403994 MYBPC2Q14324 1141 aa16.63■□□□□ 0.25
TPM1-207ENST00000403994 POSTNQ15063 836 aa16.63■□□□□ 0.25
TPM1-207ENST00000403994 FOXD4L5Q5VV16 416 aaPredicted RBP16.63■□□□□ 0.25
TPM1-207ENST00000403994 PHLDB3Q6NSJ2 640 aa16.63■□□□□ 0.25
TPM1-207ENST00000403994 PDZD4Q76G19 769 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms