RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 SCN1AP35498 2009 aa28.88■■■□□ 2.21
CGREF1-204ENST00000402550 EPOPA6NHQ4 379 aa28.88■■■□□ 2.21
CGREF1-204ENST00000402550 TEX33O43247 280 aa28.88■■■□□ 2.21
CGREF1-204ENST00000402550 B3GAT3O94766 335 aa28.88■■■□□ 2.21
CGREF1-204ENST00000402550 HLA-DRAP01903 254 aa28.88■■■□□ 2.21
CGREF1-204ENST00000402550 ITGB1P05556 798 aa28.88■■■□□ 2.21
CGREF1-204ENST00000402550 POLR2BP30876 1174 aaKnown RBP28.88■■■□□ 2.21
CGREF1-204ENST00000402550 PLCB3Q01970 1234 aa28.88■■■□□ 2.21
CGREF1-204ENST00000402550 PCMTD1Q96MG8 357 aaPredicted RBP28.88■■■□□ 2.21
CGREF1-204ENST00000402550 ALG13Q9NP73 1137 aaKnown RBP28.88■■■□□ 2.21
CGREF1-204ENST00000402550 AGAP1Q9UPQ3 857 aa28.88■■■□□ 2.21
CGREF1-204ENST00000402550 PODXLO00592 558 aa28.87■■■□□ 2.21
CGREF1-204ENST00000402550 GRIN2CQ14957 1233 aa28.87■■■□□ 2.21
CGREF1-204ENST00000402550 WDR44Q5JSH3 913 aa28.87■■■□□ 2.21
CGREF1-204ENST00000402550 C9orf57Q5W0N0 161 aa28.87■■■□□ 2.21
CGREF1-204ENST00000402550 C3orf58Q8NDZ4 430 aa28.87■■■□□ 2.21
CGREF1-204ENST00000402550 TMEM169Q96HH4 297 aa28.87■■■□□ 2.21
CGREF1-204ENST00000402550 ERGIC2Q96RQ1 377 aa28.87■■■□□ 2.21
CGREF1-204ENST00000402550 ANO9A1A5B4 782 aa28.86■■■□□ 2.21
CGREF1-204ENST00000402550 RFXAPO00287 272 aa28.86■■■□□ 2.21
CGREF1-204ENST00000402550 AP5Z1O43299 807 aa28.86■■■□□ 2.21
CGREF1-204ENST00000402550 KIF4AO95239 1232 aa28.86■■■□□ 2.21
CGREF1-204ENST00000402550 KRT17Q04695 432 aa28.86■■■□□ 2.21
CGREF1-204ENST00000402550 MYO1EQ12965 1108 aa28.86■■■□□ 2.21
CGREF1-204ENST00000402550 GPM6BQ13491 265 aa28.86■■■□□ 2.21
CGREF1-204ENST00000402550 SGSM1Q2NKQ1 1148 aa28.86■■■□□ 2.21
CGREF1-204ENST00000402550 CD300LGQ6UXG3 332 aa28.86■■■□□ 2.21
CGREF1-204ENST00000402550 SPPL3Q8TCT6 385 aa28.86■■■□□ 2.21
CGREF1-204ENST00000402550 ANP32BQ92688 251 aaKnown RBP28.86■■■□□ 2.21
CGREF1-204ENST00000402550 ZNF560Q96MR9 790 aa28.86■■■□□ 2.21
CGREF1-204ENST00000402550 SIX4Q9UIU6 781 aa28.86■■■□□ 2.21
CGREF1-204ENST00000402550 ADAM28Q9UKQ2 775 aa28.86■■■□□ 2.21
CGREF1-204ENST00000402550 A0A1W2PQC6 194 aa28.85■■■□□ 2.21
CGREF1-204ENST00000402550 TMEM189-UBE2V1I3L0A0 370 aa28.85■■■□□ 2.21
CGREF1-204ENST00000402550 PIRO00625 290 aa28.85■■■□□ 2.21
CGREF1-204ENST00000402550 TADA2AO75478 443 aa28.85■■■□□ 2.21
CGREF1-204ENST00000402550 VNN1O95497 513 aa28.85■■■□□ 2.21
CGREF1-204ENST00000402550 CST3P01034 146 aaPredicted RBP28.85■■■□□ 2.21
CGREF1-204ENST00000402550 ATICP31939 592 aa28.85■■■□□ 2.21
CGREF1-204ENST00000402550 PNPLA4P41247 253 aa28.85■■■□□ 2.21
CGREF1-204ENST00000402550 SYCP1Q15431 976 aa28.85■■■□□ 2.21
CGREF1-204ENST00000402550 SCARA3Q6AZY7 606 aa28.85■■■□□ 2.21
CGREF1-204ENST00000402550 LRRC52Q8N7C0 313 aa28.85■■■□□ 2.21
CGREF1-204ENST00000402550 EHBP1Q8NDI1 1231 aa28.85■■■□□ 2.21
CGREF1-204ENST00000402550 CXorf38Q8TB03 319 aa28.85■■■□□ 2.21
CGREF1-204ENST00000402550 HASPINQ8TF76 798 aa28.85■■■□□ 2.21
CGREF1-204ENST00000402550 FAM161BQ96MY7 647 aa28.85■■■□□ 2.21
CGREF1-204ENST00000402550 PPEF2O14830 753 aa28.84■■■□□ 2.21
CGREF1-204ENST00000402550 ZNF75DP51815 510 aa28.84■■■□□ 2.21
CGREF1-204ENST00000402550 TAF4BQ92750 862 aa28.84■■■□□ 2.21
CGREF1-204ENST00000402550 MRFAP1L1Q96HT8 127 aa28.84■■■□□ 2.21
CGREF1-204ENST00000402550 PLXNA4Q9HCM2 1894 aa28.84■■■□□ 2.21
CGREF1-204ENST00000402550 GRM6O15303 877 aa28.84■■■□□ 2.21
CGREF1-204ENST00000402550 EFEMP2O95967 443 aa28.84■■■□□ 2.21
CGREF1-204ENST00000402550 MYL6P60660 151 aa28.84■■■□□ 2.21
CGREF1-204ENST00000402550 ZNF699Q32M78 642 aa28.84■■■□□ 2.21
CGREF1-204ENST00000402550 TRIM65Q6PJ69 517 aa28.84■■■□□ 2.21
CGREF1-204ENST00000402550 DDX53Q86TM3 631 aaKnown RBP28.84■■■□□ 2.21
CGREF1-204ENST00000402550 SEMA4DQ92854 862 aa28.84■■■□□ 2.21
CGREF1-204ENST00000402550 HPDLQ96IR7 371 aa28.84■■■□□ 2.21
CGREF1-204ENST00000402550 INTS2Q9H0H0 1204 aaKnown RBP28.84■■■□□ 2.21
CGREF1-204ENST00000402550 PRDM12Q9H4Q4 367 aa28.84■■■□□ 2.21
CGREF1-204ENST00000402550 LPXNO60711 386 aa28.83■■■□□ 2.21
CGREF1-204ENST00000402550 ADCY5O95622 1261 aa28.83■■■□□ 2.21
CGREF1-204ENST00000402550 PON1P27169 355 aa28.83■■■□□ 2.21
CGREF1-204ENST00000402550 NT5C1BQ96P26 610 aa28.83■■■□□ 2.21
CGREF1-204ENST00000402550 VN1R3Q9BXE9 311 aa28.83■■■□□ 2.21
CGREF1-204ENST00000402550 GPR62Q9BZJ7 368 aa28.83■■■□□ 2.21
CGREF1-204ENST00000402550 PUF60Q9UHX1 559 aaKnown RBP28.83■■■□□ 2.21
CGREF1-204ENST00000402550 LZTS1Q9Y250 596 aa28.83■■■□□ 2.21
CGREF1-204ENST00000402550 ASS1P00966 412 aaKnown RBP28.82■■■□□ 2.2
CGREF1-204ENST00000402550 SLC9A1P19634 815 aa28.82■■■□□ 2.2
CGREF1-204ENST00000402550 DNAJB1P25685 340 aa28.82■■■□□ 2.2
CGREF1-204ENST00000402550 TAF6P49848 677 aa28.82■■■□□ 2.2
CGREF1-204ENST00000402550 UBE3AQ05086 875 aa28.82■■■□□ 2.2
CGREF1-204ENST00000402550 KCNMA1Q12791 1236 aa28.82■■■□□ 2.2
CGREF1-204ENST00000402550 CAMK1Q14012 370 aa28.82■■■□□ 2.2
CGREF1-204ENST00000402550 Q7L0L9 218 aa28.82■■■□□ 2.2
CGREF1-204ENST00000402550 GDPD5Q8WTR4 605 aa28.82■■■□□ 2.2
CGREF1-204ENST00000402550 POF1BQ8WVV4 589 aa28.82■■■□□ 2.2
CGREF1-204ENST00000402550 PI4K2AQ9BTU6 479 aa28.82■■■□□ 2.2
CGREF1-204ENST00000402550 LSM14BQ9BX40 385 aaKnown RBP28.82■■■□□ 2.2
CGREF1-204ENST00000402550 NUB1Q9Y5A7 615 aa28.82■■■□□ 2.2
CGREF1-204ENST00000402550 LILRA4P59901 499 aa28.81■■■□□ 2.2
CGREF1-204ENST00000402550 NOP14P78316 857 aaKnown RBP28.81■■■□□ 2.2
CGREF1-204ENST00000402550 SV2CQ496J9 727 aa28.81■■■□□ 2.2
CGREF1-204ENST00000402550 FUT10Q6P4F1 479 aa28.81■■■□□ 2.2
CGREF1-204ENST00000402550 RNF168Q8IYW5 571 aaPredicted RBP28.81■■■□□ 2.2
CGREF1-204ENST00000402550 LMO3Q8TAP4 145 aa28.81■■■□□ 2.2
CGREF1-204ENST00000402550 SIK3Q9Y2K2 1263 aa28.81■■■□□ 2.2
CGREF1-204ENST00000402550 STAU1O95793 577 aaKnown RBP28.8■■■□□ 2.2
CGREF1-204ENST00000402550 P4HA1P13674 534 aa28.8■■■□□ 2.2
CGREF1-204ENST00000402550 PAX3P23760 479 aa28.8■■■□□ 2.2
CGREF1-204ENST00000402550 ZNF667Q5HYK9 610 aa28.8■■■□□ 2.2
CGREF1-204ENST00000402550 TAS1R1Q7RTX1 841 aa28.8■■■□□ 2.2
CGREF1-204ENST00000402550 NEK11Q8NG66 645 aa28.8■■■□□ 2.2
CGREF1-204ENST00000402550 VRTNQ9H8Y1 702 aa28.8■■■□□ 2.2
CGREF1-204ENST00000402550 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.8■■■□□ 2.2
CGREF1-204ENST00000402550 TRIM21P19474 475 aaKnown RBP28.79■■■□□ 2.2
CGREF1-204ENST00000402550 BRCC3P46736 316 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms