RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 RUNX1T1Q06455 604 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 COL9A2Q14055 689 aaPredicted RBP6.55□□□□□ -1.36
CLIP4-202ENST00000401605 SEMA3AQ14563 771 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 BCL2A1Q16548 175 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 TRIM60Q495X7 471 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 CEP78Q5JTW2 689 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 BZW1Q7L1Q6 419 aaKnown RBP6.55□□□□□ -1.36
CLIP4-202ENST00000401605 SRGAP1Q7Z6B7 1085 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 FCHSD1Q86WN1 690 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 TOR1AIP2Q8NFQ8 470 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 FERMT2Q96AC1 680 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 THAP11Q96EK4 314 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 TSEN34Q9BSV6 310 aaKnown RBP6.55□□□□□ -1.36
CLIP4-202ENST00000401605 TARS2Q9BW92 718 aaKnown RBP6.55□□□□□ -1.36
CLIP4-202ENST00000401605 RHOBTB2Q9BYZ6 727 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 ACAD9Q9H845 621 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 ETNK1Q9HBU6 452 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 PREBQ9HCU5 417 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 PRDM5Q9NQX1 630 aaPredicted RBP6.55□□□□□ -1.36
CLIP4-202ENST00000401605 IL17RBQ9NRM6 502 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 SCHIP1Q9P0W5 487 aaPredicted RBP6.55□□□□□ -1.36
CLIP4-202ENST00000401605 HOOK1Q9UJC3 728 aaKnown RBP6.55□□□□□ -1.36
CLIP4-202ENST00000401605 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.55□□□□□ -1.36
CLIP4-202ENST00000401605 PLXNB2O15031 1838 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 SZT2Q5T011 3432 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 DOCK3Q8IZD9 2030 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 ZMYM6O95789 1325 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 RANBP6O60518 1105 aaKnown RBP6.55□□□□□ -1.36
CLIP4-202ENST00000401605 GREM1O60565 184 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 ADAMTS4O75173 837 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 GLULP15104 373 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 NFKBIAP25963 317 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 ARHGAP25P42331 645 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 ACADSBP45954 432 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 NOVP48745 357 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 PPM1FP49593 454 aaPredicted RBP6.55□□□□□ -1.36
CLIP4-202ENST00000401605 IFFO1Q0D2I5 559 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 ACVR2BQ13705 512 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 KRT71Q3SY84 523 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 SLC2A7Q6PXP3 512 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 LVRNQ6Q4G3 990 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 C16orf54Q6UWD8 224 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 RTL10Q7L3V2 364 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 ZNF598Q86UK7 904 aaKnown RBP6.55□□□□□ -1.36
CLIP4-202ENST00000401605 FAM20CQ8IXL6 584 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 SYNPOQ8N3V7 929 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 MDM1Q8TC05 714 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 FAM227BQ96M60 508 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 PRPF18Q99633 342 aaKnown RBP6.55□□□□□ -1.36
CLIP4-202ENST00000401605 TRPV6Q9H1D0 765 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 ABHD16BQ9H3Z7 469 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 CLSTN2Q9H4D0 955 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 POLMQ9NP87 494 aaPredicted RBP6.55□□□□□ -1.36
CLIP4-202ENST00000401605 PRDM9Q9NQV7 894 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 OBP2AQ9NY56 170 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 IPPQ9Y573 584 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 CAPN7Q9Y6W3 813 aa6.55□□□□□ -1.36
CLIP4-202ENST00000401605 ZNF236Q9UL36 1845 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 A0A0D9SFI3 127 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 A0A1W2PQ45 241 aaPredicted RBP6.54□□□□□ -1.36
CLIP4-202ENST00000401605 A0A1W2PQY0 241 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 CCDC169A6NNP5 214 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 HNRNPCL2B2RXH8 293 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 POTEB2H3BUK9 544 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 BACH1O14867 736 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 B4GALT4O60513 344 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 HNRNPCL1O60812 293 aaKnown RBP6.54□□□□□ -1.36
CLIP4-202ENST00000401605 DUSP11O75319 330 aaKnown RBP6.54□□□□□ -1.36
CLIP4-202ENST00000401605 INMTO95050 263 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 MAP3K6O95382 1288 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 SEC24BO95487 1268 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 FAM153BP0C7A2 387 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 HSPD1P10809 573 aaKnown RBP6.54□□□□□ -1.36
CLIP4-202ENST00000401605 CES1P23141 567 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 CD97P48960 835 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 KPNA1P52294 538 aaPredicted RBP6.54□□□□□ -1.36
CLIP4-202ENST00000401605 GABREP78334 506 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 PDE1BQ01064 536 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 GBE1Q04446 702 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 NFE2L1Q14494 772 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 GRIN2CQ14957 1233 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 ANKRD1Q15327 319 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 GFOD2Q3B7J2 385 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 SLC44A4Q53GD3 710 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 TMTC4Q5T4D3 741 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 PTCRAQ6ISU1 281 aaPredicted RBP6.54□□□□□ -1.36
CLIP4-202ENST00000401605 TUBA3EQ6PEY2 450 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 FOXR1Q6PIV2 292 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 KCTD1Q719H9 257 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 ARMCX2Q7L311 632 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 CCDC83Q8IWF9 413 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 DEFB123Q8N688 67 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 CCDC148Q8NFR7 591 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 PLVAPQ9BX97 442 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 CD93Q9NPY3 652 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 PDLIM7Q9NR12 457 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 RNF146Q9NTX7 359 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 ABCF3Q9NUQ8 709 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 ZNF69Q9UC07 566 aa6.54□□□□□ -1.36
CLIP4-202ENST00000401605 FAM169AQ9Y6X4 670 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms