RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 ITGA8P53708 1063 aa14.28□□□□□ -0.12
SIRPA-203ENST00000400068 GTF2BQ00403 316 aa14.28□□□□□ -0.12
SIRPA-203ENST00000400068 ATP13A4Q4VNC1 1196 aa14.28□□□□□ -0.12
SIRPA-203ENST00000400068 MAP1SQ66K74 1059 aaPredicted RBP14.28□□□□□ -0.12
SIRPA-203ENST00000400068 ANKRD13AQ8IZ07 590 aa14.28□□□□□ -0.12
SIRPA-203ENST00000400068 CCDC197Q8NCU1 140 aa14.28□□□□□ -0.12
SIRPA-203ENST00000400068 C7orf43Q8WVR3 580 aa14.28□□□□□ -0.12
SIRPA-203ENST00000400068 MBOAT7Q96N66 472 aa14.28□□□□□ -0.12
SIRPA-203ENST00000400068 GMNCA6NCL1 334 aa14.28□□□□□ -0.12
SIRPA-203ENST00000400068 CALB1P05937 261 aa14.28□□□□□ -0.12
SIRPA-203ENST00000400068 BRAFP15056 766 aa14.28□□□□□ -0.12
SIRPA-203ENST00000400068 EIF3BP55884 814 aaKnown RBP14.28□□□□□ -0.12
SIRPA-203ENST00000400068 KIZQ2M2Z5 673 aa14.28□□□□□ -0.12
SIRPA-203ENST00000400068 FAM182AQ5T1J6 154 aa14.28□□□□□ -0.12
SIRPA-203ENST00000400068 C6orf118Q5T5N4 469 aa14.28□□□□□ -0.12
SIRPA-203ENST00000400068 CATSPERGQ6ZRH7 1159 aa14.28□□□□□ -0.12
SIRPA-203ENST00000400068 FBF1Q8TES7 1133 aa14.28□□□□□ -0.12
SIRPA-203ENST00000400068 PYROXD1Q8WU10 500 aa14.28□□□□□ -0.12
SIRPA-203ENST00000400068 TACO1Q9BSH4 297 aaKnown RBP14.28□□□□□ -0.12
SIRPA-203ENST00000400068 SNX25Q9H3E2 840 aa14.28□□□□□ -0.12
SIRPA-203ENST00000400068 XIRP1Q702N8 1843 aaKnown RBP14.28□□□□□ -0.12
SIRPA-203ENST00000400068 A6NJR5 290 aa14.27□□□□□ -0.12
SIRPA-203ENST00000400068 GLRA2P23416 452 aa14.27□□□□□ -0.12
SIRPA-203ENST00000400068 CDH6P55285 790 aa14.27□□□□□ -0.12
SIRPA-203ENST00000400068 MARSP56192 900 aaKnown RBP14.27□□□□□ -0.12
SIRPA-203ENST00000400068 MYO1EQ12965 1108 aa14.27□□□□□ -0.12
SIRPA-203ENST00000400068 PDIA2Q13087 525 aaKnown RBP14.27□□□□□ -0.12
SIRPA-203ENST00000400068 XRRA1Q6P2D8 792 aa14.27□□□□□ -0.12
SIRPA-203ENST00000400068 IP6K2Q9UHH9 426 aa14.27□□□□□ -0.12
SIRPA-203ENST00000400068 A0A087WZ62 844 aa14.27□□□□□ -0.12
SIRPA-203ENST00000400068 FRMD3A2A2Y4 597 aa14.27□□□□□ -0.12
SIRPA-203ENST00000400068 M0QZ92 97 aa14.27□□□□□ -0.12
SIRPA-203ENST00000400068 RARAP10276 462 aa14.27□□□□□ -0.12
SIRPA-203ENST00000400068 LAMTOR4Q0VGL1 99 aa14.27□□□□□ -0.12
SIRPA-203ENST00000400068 TWF2Q6IBS0 349 aaKnown RBP14.27□□□□□ -0.12
SIRPA-203ENST00000400068 OPTNQ96CV9 577 aa14.27□□□□□ -0.12
SIRPA-203ENST00000400068 FDXACB1Q9BRP7 624 aaPredicted RBP14.27□□□□□ -0.12
SIRPA-203ENST00000400068 SMARCAD1Q9H4L7 1026 aa14.27□□□□□ -0.12
SIRPA-203ENST00000400068 SIX2Q9NPC8 291 aa14.27□□□□□ -0.12
SIRPA-203ENST00000400068 GPRC5DQ9NZD1 345 aa14.27□□□□□ -0.12
SIRPA-203ENST00000400068 CNTNAP1P78357 1384 aa14.27□□□□□ -0.13
SIRPA-203ENST00000400068 MAN1A1P33908 653 aa14.27□□□□□ -0.13
SIRPA-203ENST00000400068 NAMPTP43490 491 aa14.27□□□□□ -0.13
SIRPA-203ENST00000400068 ADCY2Q08462 1091 aa14.27□□□□□ -0.13
SIRPA-203ENST00000400068 CROCCP2Q86T23 111 aa14.27□□□□□ -0.13
SIRPA-203ENST00000400068 AFG1LQ8WV93 481 aa14.27□□□□□ -0.13
SIRPA-203ENST00000400068 PWWP2AQ96N64 755 aa14.27□□□□□ -0.13
SIRPA-203ENST00000400068 KLF6Q99612 283 aaPredicted RBP14.27□□□□□ -0.13
SIRPA-203ENST00000400068 PNMA3Q9UL41 463 aa14.27□□□□□ -0.13
SIRPA-203ENST00000400068 ZNF536O15090 1300 aa14.27□□□□□ -0.13
SIRPA-203ENST00000400068 CHN1P15882 459 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 MXD4Q14582 209 aaPredicted RBP14.26□□□□□ -0.13
SIRPA-203ENST00000400068 TTMPQ5BVD1 217 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 SNF8Q96H20 258 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 SENP7Q9BQF6 1050 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 C2orf40Q9H1Z8 148 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 ERVK-5Q9HDB9 667 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 POLIQ9UNA4 740 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 COG5Q9UP83 839 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 GARTP22102 1010 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 GBP1P32455 592 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 SURF1Q15526 300 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.26□□□□□ -0.13
SIRPA-203ENST00000400068 RDM1Q8NG50 284 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 ATL2Q8NHH9 583 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 TBC1D31Q96DN5 1066 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 RBM41Q96IZ5 413 aaKnown RBP14.26□□□□□ -0.13
SIRPA-203ENST00000400068 SMC6Q96SB8 1091 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 PRMT1Q99873 361 aaKnown RBP14.26□□□□□ -0.13
SIRPA-203ENST00000400068 NIF3L1Q9GZT8 377 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 C17orf75Q9HAS0 396 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 CISHQ9NSE2 258 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 TCRBV7S2A1N4TA0A589 114 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 LMNB2Q03252 620 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 DRP2Q13474 957 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 SGSM1Q2NKQ1 1148 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 ASTE1Q2TB18 679 aaPredicted RBP14.26□□□□□ -0.13
SIRPA-203ENST00000400068 SRLQ86TD4 932 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 KLRG1Q96E93 195 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 RBM15Q96T37 977 aaKnown RBP eCLIP14.26□□□□□ -0.13
SIRPA-203ENST00000400068 CHST7Q9NS84 486 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 LCMT1Q9UIC8 334 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 ATRNL1Q5VV63 1379 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 CCL15-CCL14A0A0B4J2E2 113 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 A8MXQ7 604 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 CTSHP09668 335 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 LCP1P13796 627 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 FMO1Q01740 532 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 ITIH3Q06033 890 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 CCL15Q16663 113 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 IER5Q5VY09 327 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 NIPA1Q7RTP0 329 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 AP5M1Q9H0R1 490 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 SAE1Q9UBE0 346 aaPredicted RBP14.26□□□□□ -0.13
SIRPA-203ENST00000400068 INPP5FQ9Y2H2 1132 aa14.26□□□□□ -0.13
SIRPA-203ENST00000400068 OGTO15294 1046 aa14.25□□□□□ -0.13
SIRPA-203ENST00000400068 TOM1L1O75674 476 aa14.25□□□□□ -0.13
SIRPA-203ENST00000400068 PIAS1O75925 651 aa14.25□□□□□ -0.13
SIRPA-203ENST00000400068 RARBP10826 455 aa14.25□□□□□ -0.13
SIRPA-203ENST00000400068 EZRP15311 586 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms