RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 SH2D3CQ8N5H7 860 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 C9orf72Q96LT7 481 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 CPA4Q9UI42 421 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 ZNF263O14978 683 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 CARSP49589 748 aaKnown RBP14.43□□□□□ -0.1
VAPA-202ENST00000400000 FOXO4P98177 505 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 EMC2Q15006 297 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 CARNMT1Q8N4J0 409 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 DPF2Q92785 391 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 MTBPQ96DY7 904 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 RNPC3Q96LT9 517 aaKnown RBP14.43□□□□□ -0.1
VAPA-202ENST00000400000 ZMAT2Q96NC0 199 aaKnown RBP14.43□□□□□ -0.1
VAPA-202ENST00000400000 OSBPL3Q9H4L5 887 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 PTPRHQ9HD43 1115 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 DDX28Q9NUL7 540 aaKnown RBP14.43□□□□□ -0.1
VAPA-202ENST00000400000 RNF14Q9UBS8 474 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 FLT1P17948 1338 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 CYP2C9P11712 490 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 RIN3Q8TB24 985 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 DDX50Q9BQ39 737 aaKnown RBP14.42□□□□□ -0.1
VAPA-202ENST00000400000 CYTH3O43739 400 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 PMPCBO75439 489 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 GTF2H1P32780 548 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 PLEKHM3Q6ZWE6 761 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 CFAP74Q9C0B2 1584 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 TRAPPC3O43617 180 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 SKAP2O75563 359 aaPredicted RBP14.42□□□□□ -0.1
VAPA-202ENST00000400000 PARNO95453 639 aaKnown RBP14.42□□□□□ -0.1
VAPA-202ENST00000400000 GUCA1CO95843 209 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 ITGB3P05106 788 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 MTIF3Q9H2K0 278 aaKnown RBP14.42□□□□□ -0.1
VAPA-202ENST00000400000 PITPNM2Q9BZ72 1349 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 ASAP2O43150 1006 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 MB21D2Q8IYB1 491 aaPredicted RBP14.42□□□□□ -0.1
VAPA-202ENST00000400000 PHF21AQ96BD5 680 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 LRRC1Q9BTT6 524 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 NDUFB10O96000 172 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 CPA2P48052 419 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 ALDH7A1P49419 539 aaKnown RBP14.42□□□□□ -0.1
VAPA-202ENST00000400000 CEP55Q53EZ4 464 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 ATF7IP2Q5U623 682 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 PRR5LQ6MZQ0 368 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 RD3Q7Z3Z2 195 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 MIB1Q86YT6 1006 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 YME1L1Q96TA2 773 aa14.42□□□□□ -0.1
VAPA-202ENST00000400000 LINC00854A0A1B0GVQ3 168 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 RBBP8NLQ8NC74 664 aaPredicted RBP14.41□□□□□ -0.1
VAPA-202ENST00000400000 SNRNP35Q16560 246 aaKnown RBP14.41□□□□□ -0.1
VAPA-202ENST00000400000 HES6Q96HZ4 224 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 OSBPL5Q9H0X9 879 aaPredicted RBP14.41□□□□□ -0.1
VAPA-202ENST00000400000 NMRK2Q9NPI5 230 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 SKOR1P84550 965 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 CUL4AQ13619 759 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 PROM2Q8N271 834 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 OR9Q1Q8NGQ5 310 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 NUDT12Q9BQG2 462 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 DEFB129Q9H1M3 183 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.41□□□□□ -0.12e-8■■■■□ 23.9
VAPA-202ENST00000400000 CCDC188H7C350 402 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 MAN1A2O60476 641 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 RTN2O75298 545 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 PTPN7P35236 360 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 BLOC1S5Q8TDH9 187 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 SENP2Q9HC62 589 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 AGPAT5Q9NUQ2 364 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 DIS3Q9Y2L1 958 aaKnown RBP14.41□□□□□ -0.1
VAPA-202ENST00000400000 ZNF711Q9Y462 761 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 IGFBP4P22692 258 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 SARM1Q6SZW1 724 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 GPRC5AQ8NFJ5 357 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 OTUB1Q96FW1 271 aaPredicted RBP14.41□□□□□ -0.1
VAPA-202ENST00000400000 OSBPL10Q9BXB5 764 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 RNF19AQ9NV58 838 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 KRT87PA6NCN2 255 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 MIF4GDA9UHW6 222 aaKnown RBP14.41□□□□□ -0.1
VAPA-202ENST00000400000 RBP5P82980 135 aa14.41□□□□□ -0.1
VAPA-202ENST00000400000 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.41□□□□□ -0.1
VAPA-202ENST00000400000 GMNCA6NCL1 334 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 MAP3K13O43283 966 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 HARS2P49590 506 aaKnown RBP14.4□□□□□ -0.1
VAPA-202ENST00000400000 NPEPPSP55786 919 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 CDH18Q13634 790 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 LRRC23Q53EV4 343 aaPredicted RBP14.4□□□□□ -0.1
VAPA-202ENST00000400000 ERAP2Q6P179 960 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 CELF4Q9BZC1 486 aaKnown RBP14.4□□□□□ -0.1
VAPA-202ENST00000400000 TRABDQ9H4I3 376 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 SMARCAD1Q9H4L7 1026 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 ACTR5Q9H9F9 607 aaPredicted RBP14.4□□□□□ -0.1
VAPA-202ENST00000400000 A8MX80 341 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 KCNJ1P48048 391 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 NCALDP61601 193 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 GLB1LQ6UWU2 654 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 CCDC81Q6ZN84 652 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 NLRP14Q86W24 1093 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 STKLD1Q8NE28 680 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 TAF1DQ9H5J8 278 aaPredicted RBP14.4□□□□□ -0.1
VAPA-202ENST00000400000 FAM32AQ9Y421 112 aaKnown RBP14.4□□□□□ -0.1
VAPA-202ENST00000400000 MROH9Q5TGP6 573 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 C9orf131Q5VYM1 1079 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 FMR1NBQ8N0W7 255 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms