RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 TXNDC9O14530 226 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 PSMG1O95456 288 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 ESRRAP11474 423 aaPredicted RBP18.08■□□□□ 0.48
PTPRA-205ENST00000399903 TATDN1Q6P1N9 297 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 ENDOVQ8N8Q3 282 aaKnown RBP18.08■□□□□ 0.48
PTPRA-205ENST00000399903 KLHL23Q8NBE8 558 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 RFWD2Q8NHY2 731 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 NMD3Q96D46 503 aaKnown RBP18.08■□□□□ 0.48
PTPRA-205ENST00000399903 VCX3BQ9H321 246 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 VCX3AQ9NNX9 186 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 GALNT8Q9NY28 637 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 GRID1Q9ULK0 1009 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 FRMD4BQ9Y2L6 1034 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 STARD13Q9Y3M8 1113 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 USP1O94782 785 aa18.07■□□□□ 0.48
PTPRA-205ENST00000399903 ZBTB7AO95365 584 aa18.07■□□□□ 0.48
PTPRA-205ENST00000399903 RRM1P23921 792 aa18.07■□□□□ 0.48
PTPRA-205ENST00000399903 CCDC15Q0P6D6 951 aa18.07■□□□□ 0.48
PTPRA-205ENST00000399903 ACVR2BQ13705 512 aa18.07■□□□□ 0.48
PTPRA-205ENST00000399903 CNPY1Q3B7I2 92 aa18.07■□□□□ 0.48
PTPRA-205ENST00000399903 PHLDB3Q6NSJ2 640 aa18.07■□□□□ 0.48
PTPRA-205ENST00000399903 FAM210AQ96ND0 272 aa18.07■□□□□ 0.48
PTPRA-205ENST00000399903 RBM15Q96T37 977 aaKnown RBP eCLIP18.07■□□□□ 0.48
PTPRA-205ENST00000399903 TMOD2Q9NZR1 351 aa18.07■□□□□ 0.48
PTPRA-205ENST00000399903 TRAF3IP3Q9Y228 551 aa18.07■□□□□ 0.48
PTPRA-205ENST00000399903 ATF5Q9Y2D1 282 aaPredicted RBP18.07■□□□□ 0.48
PTPRA-205ENST00000399903 LRRC37AA6NMS7 1700 aa18.07■□□□□ 0.48
PTPRA-205ENST00000399903 A0A1W2PPM1 405 aa18.07■□□□□ 0.48
PTPRA-205ENST00000399903 ABLIM1O14639 778 aa18.07■□□□□ 0.48
PTPRA-205ENST00000399903 TROVE2P10155 538 aaKnown RBP eCLIP18.07■□□□□ 0.48
PTPRA-205ENST00000399903 CLUL1Q15846 466 aa18.07■□□□□ 0.48
PTPRA-205ENST00000399903 IZUMO3Q5VZ72 239 aa18.07■□□□□ 0.48
PTPRA-205ENST00000399903 OLFML2BQ68BL8 750 aa18.07■□□□□ 0.48
PTPRA-205ENST00000399903 KBTBD2Q8IY47 623 aa18.07■□□□□ 0.48
PTPRA-205ENST00000399903 TUBGCP5Q96RT8 1024 aa18.07■□□□□ 0.48
PTPRA-205ENST00000399903 MKNK1Q9BUB5 465 aa18.07■□□□□ 0.48
PTPRA-205ENST00000399903 APEX2Q9UBZ4 518 aa18.07■□□□□ 0.48
PTPRA-205ENST00000399903 NENFQ9UMX5 172 aa18.07■□□□□ 0.48
PTPRA-205ENST00000399903 EGFRP00533 1210 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.06■□□□□ 0.48
PTPRA-205ENST00000399903 CLNKQ7Z7G1 428 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 OGFOD1Q8N543 542 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 DDX39AO00148 427 aaKnown RBP18.06■□□□□ 0.48
PTPRA-205ENST00000399903 GSTA2P09210 222 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 ITIH2P19823 946 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 SLC12A3P55017 1021 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 KAZNQ674X7 775 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 CCDC62Q6P9F0 684 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 TTLL6Q8N841 843 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 ZNF513Q8N8E2 541 aaPredicted RBP18.06■□□□□ 0.48
PTPRA-205ENST00000399903 TRAPPC9Q96Q05 1148 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 ZNF70Q9UC06 446 aaPredicted RBP18.06■□□□□ 0.48
PTPRA-205ENST00000399903 USTQ9Y2C2 406 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 NUMBLQ9Y6R0 609 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.06■□□□□ 0.48
PTPRA-205ENST00000399903 SPDYE2BA6NHP3 402 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 hCG_1984214I3L0E3 225 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 HNRNPRO43390 633 aaKnown RBP18.06■□□□□ 0.48
PTPRA-205ENST00000399903 CCDC22O60826 627 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 EDF1O60869 148 aaKnown RBP18.06■□□□□ 0.48
PTPRA-205ENST00000399903 SGPL1O95470 568 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 SPDYE6P0CI01 402 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 AMPD1P23109 780 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 GCLMP48507 274 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 EPC2Q52LR7 807 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 PPM1KQ8N3J5 372 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 ZNF713Q8N859 430 aaPredicted RBP18.06■□□□□ 0.48
PTPRA-205ENST00000399903 DCAF4Q8WV16 495 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 ZNF184Q99676 751 aaPredicted RBP18.06■□□□□ 0.48
PTPRA-205ENST00000399903 HOMER2Q9NSB8 354 aa18.06■□□□□ 0.48
PTPRA-205ENST00000399903 RGS17Q9UGC6 210 aaPredicted RBP18.06■□□□□ 0.48
PTPRA-205ENST00000399903 R3HDM2Q9Y2K5 976 aaKnown RBP18.06■□□□□ 0.48
PTPRA-205ENST00000399903 ASMTLO95671 621 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 POLD1P28340 1107 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 SERPINB3P29508 390 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 RTP1P59025 263 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 C10orf82Q8WW14 230 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 SH2D3AQ9BRG2 576 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.05■□□□□ 0.48
PTPRA-205ENST00000399903 A6NJR5 290 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 LYNP07948 512 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 SPATA31D3P0C874 917 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 PGM1P36871 562 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 MAGEA4P43358 317 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 MTMR2Q13614 643 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 TMEM63BQ5T3F8 832 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 SPATA31D4Q6ZUB0 917 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 TTC7BQ86TV6 843 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 ANKMY2Q8IV38 441 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 SYT2Q8N9I0 419 aaPredicted RBP18.05■□□□□ 0.48
PTPRA-205ENST00000399903 HIPK4Q8NE63 616 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 MKL1Q969V6 931 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 CLPTM1LQ96KA5 538 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 WNT8AQ9H1J5 351 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 KLHL11Q9NVR0 708 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 RPS6KL1Q9Y6S9 549 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 NRXN2Q9P2S2 1712 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 ADRA1DP25100 572 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 ANXA13P27216 316 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 MOGSQ13724 837 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms