RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 ATXN3LQ9H3M9 355 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 L2HGDHQ9H9P8 463 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 CRLS1Q9UJA2 301 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 RUVBL2Q9Y230 463 aaKnown RBP11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 PLEKHG1Q9ULL1 1385 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 MAGEB2O15479 319 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 MEFVO15553 781 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 TBXAS1P24557 533 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 GRAMD1BQ3KR37 738 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 RBM23Q86U06 439 aaKnown RBP11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 JAMLQ86YT9 394 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 ADGRF4Q8IZF3 695 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 CEP95Q96GE4 821 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 XPO6Q96QU8 1125 aaKnown RBP11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 NLNQ9BYT8 704 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 PCDHA10Q9Y5I2 948 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 MYMKA6NI61 221 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 CYP21A2P08686 494 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 GUCY1A2P33402 732 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 CNGA2Q16280 664 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 NOTUMQ6P988 496 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 PRR23BQ6ZRT6 265 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 HEATR4Q86WZ0 1026 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 LRRC71Q8N4P6 559 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 ST13P5Q8NFI4 369 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 RNF26Q9BY78 433 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 PCSK1P29120 753 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 CDC25AP30304 524 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 EFNA5P52803 228 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 COPB1P53618 953 aaKnown RBP11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 COPS2P61201 443 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 RESTQ13127 1097 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 STRIP1Q5VSL9 837 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 KCTD16Q68DU8 428 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 TTC39CQ8N584 583 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 SLC44A5Q8NCS7 719 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 SEPT1Q8WYJ6 367 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 NRBF2Q96F24 287 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 GPR108Q9NPR9 543 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 H2AFY2Q9P0M6 372 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 ATP8A1Q9Y2Q0 1164 aa11.5□□□□□ -0.57
CACNA1C-216ENST00000399638 EFCAB6Q5THR3 1501 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 SETD1BQ9UPS6 1966 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 CDC40O60508 579 aaKnown RBP eCLIP11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 ALDH2P05091 517 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 MLNP12872 115 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 FASTKD1Q53R41 847 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 PID1Q7Z2X4 250 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 ACSF2Q96CM8 615 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 ING2Q9H160 280 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 MAD2L2Q9UI95 211 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 ANAPC7Q9UJX3 599 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 ADAM21Q9UKJ8 722 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 SYNPO2Q9UMS6 1093 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 CLIC4Q9Y696 253 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 PDHXO00330 501 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 TLL1O43897 1013 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 KRT33AO76009 404 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 CAMK2GQ13555 558 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 STYK1Q6J9G0 422 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 BCAS4Q8TDM0 211 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 SPIRE2Q8WWL2 714 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 VIPAS39Q9H9C1 493 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 ERAP1Q9NZ08 941 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 SAE1Q9UBE0 346 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 CCDC78A2IDD5 438 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 RBP5P82980 135 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 DHX9Q08211 1270 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 LMBRD2Q68DH5 695 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 RGS9BPQ6ZS82 235 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 NYAP1Q6ZVC0 841 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 GPD1LQ8N335 351 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 FBXO32Q969P5 355 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 CAPS2Q9BXY5 557 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 UPF3AQ9H1J1 476 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 KCNF1Q9H3M0 494 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 ACTR5Q9H9F9 607 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 CYP26B1Q9NR63 512 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 KCND1Q9NSA2 647 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 CD274Q9NZQ7 290 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 SPASTQ9UBP0 616 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 LRRIQ3A6PVS8 624 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 TEX33O43247 280 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 CASP14P31944 242 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 ZMYM1Q5SVZ6 1142 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 PDXDC1Q6P996 788 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 OMDQ99983 421 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 FYNP06241 537 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 CLUP10909 449 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 GCLCP48506 637 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 NCKAP1LP55160 1127 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 SCRN1Q12765 414 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 MED21Q13503 144 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 CENPUQ71F23 418 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 SMYD4Q8IYR2 804 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 STAG2Q8N3U4 1231 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 KCNV2Q8TDN2 545 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 SLC28A3Q9HAS3 691 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 PIH1D3Q9NQM4 214 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms