RNA–Protein interactions for RNA: ENST00000399627.3

SBF1-203, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-203ENST00000399627 MED15Q96RN5 788 aa19.58■□□□□ 0.72
SBF1-203ENST00000399627 CDCA3Q99618 268 aaPredicted RBP19.58■□□□□ 0.72
SBF1-203ENST00000399627 EMILIN2Q9BXX0 1053 aa19.58■□□□□ 0.72
SBF1-203ENST00000399627 PCDHB8Q9UN66 801 aa19.58■□□□□ 0.72
SBF1-203ENST00000399627 TSC2P49815 1807 aa19.58■□□□□ 0.72
SBF1-203ENST00000399627 MTCL1Q9Y4B5 1905 aaKnown RBP19.57■□□□□ 0.72
SBF1-203ENST00000399627 TEX28O15482 410 aa19.57■□□□□ 0.72
SBF1-203ENST00000399627 LINC01565O15544 149 aa19.57■□□□□ 0.72
SBF1-203ENST00000399627 PAX3P23760 479 aa19.57■□□□□ 0.72
SBF1-203ENST00000399627 PNPLA4P41247 253 aa19.57■□□□□ 0.72
SBF1-203ENST00000399627 AP3M2P53677 418 aa19.57■□□□□ 0.72
SBF1-203ENST00000399627 KLHL40Q2TBA0 621 aa19.57■□□□□ 0.72
SBF1-203ENST00000399627 SV2CQ496J9 727 aa19.57■□□□□ 0.72
SBF1-203ENST00000399627 USP37Q86T82 979 aa19.57■□□□□ 0.72
SBF1-203ENST00000399627 LRRC52Q8N7C0 313 aa19.57■□□□□ 0.72
SBF1-203ENST00000399627 EFHBQ8N7U6 833 aa19.57■□□□□ 0.72
SBF1-203ENST00000399627 PRDM6Q9NQX0 595 aa19.57■□□□□ 0.72
SBF1-203ENST00000399627 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.57■□□□□ 0.72
SBF1-203ENST00000399627 R3HCC1Q9Y3T6 440 aaKnown RBP19.57■□□□□ 0.72
SBF1-203ENST00000399627 TIMM13Q9Y5L4 95 aaPredicted RBP19.57■□□□□ 0.72
SBF1-203ENST00000399627 PHACTR2O75167 634 aa19.56■□□□□ 0.72
SBF1-203ENST00000399627 CST3P01034 146 aaPredicted RBP19.56■□□□□ 0.72
SBF1-203ENST00000399627 C4BPAP04003 597 aaKnown RBP19.56■□□□□ 0.72
SBF1-203ENST00000399627 KLRC2P26717 231 aa19.56■□□□□ 0.72
SBF1-203ENST00000399627 MCCD1P59942 119 aaPredicted RBP19.56■□□□□ 0.72
SBF1-203ENST00000399627 RBM10P98175 930 aaKnown RBP19.56■□□□□ 0.72
SBF1-203ENST00000399627 ENPEPQ07075 957 aa19.56■□□□□ 0.72
SBF1-203ENST00000399627 ADAM15Q13444 863 aa19.56■□□□□ 0.72
SBF1-203ENST00000399627 BIRC3Q13489 604 aa19.56■□□□□ 0.72
SBF1-203ENST00000399627 VARS2Q5ST30 1063 aaKnown RBP19.56■□□□□ 0.72
SBF1-203ENST00000399627 TDRD10Q5VZ19 366 aaKnown RBP19.56■□□□□ 0.72
SBF1-203ENST00000399627 PDXDC1Q6P996 788 aa19.56■□□□□ 0.72
SBF1-203ENST00000399627 SASS6Q6UVJ0 657 aa19.56■□□□□ 0.72
SBF1-203ENST00000399627 EP400NLQ6ZTU2 488 aa19.56■□□□□ 0.72
SBF1-203ENST00000399627 ANKS3Q6ZW76 656 aa19.56■□□□□ 0.72
SBF1-203ENST00000399627 FILIP1Q7Z7B0 1213 aa19.56■□□□□ 0.72
SBF1-203ENST00000399627 GLYCTKQ8IVS8 523 aa19.56■□□□□ 0.72
SBF1-203ENST00000399627 APPL2Q8NEU8 664 aa19.56■□□□□ 0.72
SBF1-203ENST00000399627 VN1R2Q8NFZ6 395 aa19.56■□□□□ 0.72
SBF1-203ENST00000399627 SYAP1Q96A49 352 aaPredicted RBP19.56■□□□□ 0.72
SBF1-203ENST00000399627 PABPC5Q96DU9 382 aaKnown RBP19.56■□□□□ 0.72
SBF1-203ENST00000399627 SRRTQ9BXP5 876 aaKnown RBP19.56■□□□□ 0.72
SBF1-203ENST00000399627 CLDND1Q9NY35 253 aa19.56■□□□□ 0.72
SBF1-203ENST00000399627 FNIP2Q9P278 1114 aa19.56■□□□□ 0.72
SBF1-203ENST00000399627 DACH1Q9UI36 760 aa19.56■□□□□ 0.72
SBF1-203ENST00000399627 KPNA7A9QM74 516 aa19.55■□□□□ 0.72
SBF1-203ENST00000399627 CYB561D2O14569 222 aa19.55■□□□□ 0.72
SBF1-203ENST00000399627 IKBKBO14920 756 aa19.55■□□□□ 0.72
SBF1-203ENST00000399627 NCK2O43639 380 aa19.55■□□□□ 0.72
SBF1-203ENST00000399627 ODC1P11926 461 aa19.55■□□□□ 0.72
SBF1-203ENST00000399627 TYMPP19971 482 aa19.55■□□□□ 0.72
SBF1-203ENST00000399627 CREMQ03060 361 aa19.55■□□□□ 0.72
SBF1-203ENST00000399627 PPP3CAQ08209 521 aa19.55■□□□□ 0.72
SBF1-203ENST00000399627 TRPC3Q13507 836 aa19.55■□□□□ 0.72
SBF1-203ENST00000399627 COL19A1Q14993 1142 aa19.55■□□□□ 0.72
SBF1-203ENST00000399627 CTC1Q2NKJ3 1217 aa19.55■□□□□ 0.72
SBF1-203ENST00000399627 CCDC40Q4G0X9 1142 aa19.55■□□□□ 0.72
SBF1-203ENST00000399627 LLGL2Q6P1M3 1020 aa19.55■□□□□ 0.72
SBF1-203ENST00000399627 HPDLQ96IR7 371 aa19.55■□□□□ 0.72
SBF1-203ENST00000399627 CLSTN3Q9BQT9 956 aa19.55■□□□□ 0.72
SBF1-203ENST00000399627 MMRN2Q9H8L6 949 aa19.55■□□□□ 0.72
SBF1-203ENST00000399627 MTRRQ9UBK8 725 aa19.55■□□□□ 0.72
SBF1-203ENST00000399627 ARMCX3Q9UH62 379 aaPredicted RBP19.55■□□□□ 0.72
SBF1-203ENST00000399627 ADAM12O43184 909 aa19.54■□□□□ 0.72
SBF1-203ENST00000399627 VNN1O95497 513 aa19.54■□□□□ 0.72
SBF1-203ENST00000399627 GLP2RO95838 553 aa19.54■□□□□ 0.72
SBF1-203ENST00000399627 ADH1AP07327 375 aa19.54■□□□□ 0.72
SBF1-203ENST00000399627 ERCC5P28715 1186 aaPredicted RBP19.54■□□□□ 0.72
SBF1-203ENST00000399627 GCLMP48507 274 aa19.54■□□□□ 0.72
SBF1-203ENST00000399627 NDUFV1P49821 464 aa19.54■□□□□ 0.72
SBF1-203ENST00000399627 MYO1EQ12965 1108 aa19.54■□□□□ 0.72
SBF1-203ENST00000399627 KCNC3Q14003 757 aa19.54■□□□□ 0.72
SBF1-203ENST00000399627 MRPL58Q14197 206 aaKnown RBP19.54■□□□□ 0.72
SBF1-203ENST00000399627 ZACNQ401N2 412 aa19.54■□□□□ 0.72
SBF1-203ENST00000399627 RSPO2Q6UXX9 243 aaPredicted RBP19.54■□□□□ 0.72
SBF1-203ENST00000399627 SV2AQ7L0J3 742 aa19.54■□□□□ 0.72
SBF1-203ENST00000399627 FRMD5Q7Z6J6 570 aa19.54■□□□□ 0.72
SBF1-203ENST00000399627 SLC22A17Q8WUG5 538 aa19.54■□□□□ 0.72
SBF1-203ENST00000399627 UBE2ZQ9H832 354 aaPredicted RBP19.54■□□□□ 0.72
SBF1-203ENST00000399627 BACE2Q9Y5Z0 518 aa19.54■□□□□ 0.72
SBF1-203ENST00000399627 HCFC2Q9Y5Z7 792 aa19.54■□□□□ 0.72
SBF1-203ENST00000399627 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.53■□□□□ 0.72
SBF1-203ENST00000399627 ARHGEF37A1IGU5 675 aa19.53■□□□□ 0.72
SBF1-203ENST00000399627 FSD2A1L4K1 749 aa19.53■□□□□ 0.72
SBF1-203ENST00000399627 H7C4K7 107 aa19.53■□□□□ 0.72
SBF1-203ENST00000399627 FGFR1OPO95684 399 aaKnown RBP19.53■□□□□ 0.72
SBF1-203ENST00000399627 EPCAMP16422 314 aa19.53■□□□□ 0.72
SBF1-203ENST00000399627 LTBRP36941 435 aa19.53■□□□□ 0.72
SBF1-203ENST00000399627 MYL6P60660 151 aa19.53■□□□□ 0.72
SBF1-203ENST00000399627 YWHAHQ04917 246 aaPredicted RBP19.53■□□□□ 0.72
SBF1-203ENST00000399627 NCOA4Q13772 614 aa19.53■□□□□ 0.72
SBF1-203ENST00000399627 CTXN3Q4LDR2 81 aa19.53■□□□□ 0.72
SBF1-203ENST00000399627 DCAF17Q5H9S7 520 aaPredicted RBP19.53■□□□□ 0.72
SBF1-203ENST00000399627 TCERG1LQ5VWI1 586 aa19.53■□□□□ 0.72
SBF1-203ENST00000399627 WSCD1Q658N2 575 aa19.53■□□□□ 0.72
SBF1-203ENST00000399627 ZNF280DQ6N043 979 aa19.53■□□□□ 0.72
SBF1-203ENST00000399627 C15orf39Q6ZRI6 1047 aa19.53■□□□□ 0.72
SBF1-203ENST00000399627 PPFIBP1Q86W92 1011 aa19.53■□□□□ 0.72
SBF1-203ENST00000399627 PALB2Q86YC2 1186 aa19.53■□□□□ 0.72
SBF1-203ENST00000399627 HLA-CQ95604 372 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms