RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 LRRC31Q6UY01 552 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 PNMA8AQ86V59 439 aaPredicted RBP18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 NEUROG2Q9H2A3 272 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 DPH5Q9H2P9 285 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 PLEKHA4Q9H4M7 779 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 WHRNQ9P202 907 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 CEP83Q9Y592 693 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 PEX10O60683 326 aa18.85■□□□□ 0.61
HLA-DQB1-204ENST00000399084 TMEM191BP0C7N4 346 aa18.85■□□□□ 0.61
HLA-DQB1-204ENST00000399084 TMOD1P28289 359 aa18.85■□□□□ 0.61
HLA-DQB1-204ENST00000399084 HOOK3Q86VS8 718 aa18.85■□□□□ 0.61
HLA-DQB1-204ENST00000399084 RHPN2Q8IUC4 686 aa18.85■□□□□ 0.61
HLA-DQB1-204ENST00000399084 TTC39CQ8N584 583 aa18.85■□□□□ 0.61
HLA-DQB1-204ENST00000399084 EXD1Q8NHP7 514 aa18.85■□□□□ 0.61
HLA-DQB1-204ENST00000399084 FEZF2Q8TBJ5 459 aa18.85■□□□□ 0.61
HLA-DQB1-204ENST00000399084 UBLCP1Q8WVY7 318 aaPredicted RBP18.85■□□□□ 0.61
HLA-DQB1-204ENST00000399084 C18orf8Q96DM3 657 aa18.85■□□□□ 0.61
HLA-DQB1-204ENST00000399084 TRIM51Q9BSJ1 452 aa18.85■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ZNFX1Q9P2E3 1918 aaKnown RBP18.85■□□□□ 0.61
HLA-DQB1-204ENST00000399084 STRIP2Q9ULQ0 834 aa18.85■□□□□ 0.61
HLA-DQB1-204ENST00000399084 EIF3HO15372 352 aaKnown RBP eCLIP18.84■□□□□ 0.61
HLA-DQB1-204ENST00000399084 MED7O43513 233 aa18.84■□□□□ 0.61
HLA-DQB1-204ENST00000399084 MCF2P10911 925 aa18.84■□□□□ 0.61
HLA-DQB1-204ENST00000399084 CETPP11597 493 aa18.84■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ITIH2P19823 946 aa18.84■□□□□ 0.61
HLA-DQB1-204ENST00000399084 NR1D1P20393 614 aa18.84■□□□□ 0.61
HLA-DQB1-204ENST00000399084 MARK3P27448 753 aa18.84■□□□□ 0.61
HLA-DQB1-204ENST00000399084 CDR1P51861 262 aa18.84■□□□□ 0.61
HLA-DQB1-204ENST00000399084 LMNB2Q03252 620 aa18.84■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ZNF792Q3KQV3 632 aa18.84■□□□□ 0.61
HLA-DQB1-204ENST00000399084 SGO2Q562F6 1265 aa18.84■□□□□ 0.61
HLA-DQB1-204ENST00000399084 DLK2Q6UY11 383 aa18.84■□□□□ 0.61
HLA-DQB1-204ENST00000399084 CEP128Q6ZU80 1094 aa18.84■□□□□ 0.61
HLA-DQB1-204ENST00000399084 BBOF1Q8ND07 529 aa18.84■□□□□ 0.61
HLA-DQB1-204ENST00000399084 PPTC7Q8NI37 304 aa18.84■□□□□ 0.61
HLA-DQB1-204ENST00000399084 DDX27Q96GQ7 796 aaKnown RBP18.84■□□□□ 0.61
HLA-DQB1-204ENST00000399084 TMEM109Q9BVC6 243 aa18.84■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ASB7Q9H672 318 aa18.84■□□□□ 0.61
HLA-DQB1-204ENST00000399084 RPF1Q9H9Y2 349 aaKnown RBP18.84■□□□□ 0.61
HLA-DQB1-204ENST00000399084 GAS8O95995 478 aa18.83■□□□□ 0.61
HLA-DQB1-204ENST00000399084 CST3P01034 146 aaPredicted RBP18.83■□□□□ 0.61
HLA-DQB1-204ENST00000399084 HOXC6P09630 235 aa18.83■□□□□ 0.61
HLA-DQB1-204ENST00000399084 POLR2BP30876 1174 aaKnown RBP18.83■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ATICP31939 592 aa18.83■□□□□ 0.61
HLA-DQB1-204ENST00000399084 COPS2P61201 443 aa18.83■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ZNF844Q08AG5 666 aa18.83■□□□□ 0.61
HLA-DQB1-204ENST00000399084 CALCOCO2Q13137 446 aa18.83■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ZNF568Q3ZCX4 644 aa18.83■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ARMCX2Q7L311 632 aa18.83■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ADAT2Q7Z6V5 191 aaKnown RBP18.83■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ZBTB33Q86T24 672 aa18.83■□□□□ 0.61
HLA-DQB1-204ENST00000399084 NT5DC4Q86YG4 428 aa18.83■□□□□ 0.61
HLA-DQB1-204ENST00000399084 FBXO16Q8IX29 292 aaPredicted RBP18.83■□□□□ 0.61
HLA-DQB1-204ENST00000399084 RCOR2Q8IZ40 523 aa18.83■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ATL2Q8NHH9 583 aa18.83■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ART4Q93070 314 aa18.83■□□□□ 0.61
HLA-DQB1-204ENST00000399084 BTBD6Q96KE9 485 aa18.83■□□□□ 0.61
HLA-DQB1-204ENST00000399084 LHX5Q9H2C1 402 aa18.83■□□□□ 0.61
HLA-DQB1-204ENST00000399084 GRHL1Q9NZI5 618 aa18.83■□□□□ 0.61
HLA-DQB1-204ENST00000399084 INO80B-WBP1J3KQ70 363 aa18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 NDC80O14777 642 aa18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 C22orf31O95567 290 aa18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 PAEPP09466 180 aa18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 RARGP13631 454 aa18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 TNFSF9P41273 254 aa18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 PMS2P54278 862 aa18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 MYL6P60660 151 aa18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 CDC42EP1Q00587 391 aa18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 MBTD1Q05BQ5 628 aa18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 ARHGAP1Q07960 439 aa18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 PIGHQ14442 188 aaPredicted RBP18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 CCNG2Q16589 344 aa18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 ZDHHC24Q6UX98 284 aa18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 LRRC71Q8N4P6 559 aa18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 INO80BQ9C086 356 aaPredicted RBP18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 MTMR12Q9C0I1 747 aa18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 FAM107BQ9H098 131 aa18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 VRTNQ9H8Y1 702 aa18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 CISHQ9NSE2 258 aa18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 MORF4L1Q9UBU8 362 aa18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 CHORDC1Q9UHD1 332 aaPredicted RBP18.83■□□□□ 0.6
HLA-DQB1-204ENST00000399084 UMODL1Q5DID0 1318 aa18.82■□□□□ 0.6
HLA-DQB1-204ENST00000399084 TMEM191CA6NGB0 347 aa18.82■□□□□ 0.6
HLA-DQB1-204ENST00000399084 TLR3O15455 904 aaKnown RBP18.82■□□□□ 0.6
HLA-DQB1-204ENST00000399084 HARSP12081 509 aaKnown RBP18.82■□□□□ 0.6
HLA-DQB1-204ENST00000399084 GTF2A2P52657 109 aa18.82■□□□□ 0.6
HLA-DQB1-204ENST00000399084 PLTPP55058 493 aa18.82■□□□□ 0.6
HLA-DQB1-204ENST00000399084 FKBP1BP68106 108 aa18.82■□□□□ 0.6
HLA-DQB1-204ENST00000399084 IRF5Q13568 498 aa18.82■□□□□ 0.6
HLA-DQB1-204ENST00000399084 ZNF699Q32M78 642 aa18.82■□□□□ 0.6
HLA-DQB1-204ENST00000399084 WDR78Q5VTH9 848 aa18.82■□□□□ 0.6
HLA-DQB1-204ENST00000399084 TTC27Q6P3X3 843 aa18.82■□□□□ 0.6
HLA-DQB1-204ENST00000399084 MAMDC4Q6UXC1 1216 aa18.82■□□□□ 0.6
HLA-DQB1-204ENST00000399084 TRIM50Q86XT4 487 aa18.82■□□□□ 0.6
HLA-DQB1-204ENST00000399084 ZDHHC14Q8IZN3 488 aa18.82■□□□□ 0.6
HLA-DQB1-204ENST00000399084 CCHCR1Q8TD31 782 aa18.82■□□□□ 0.6
HLA-DQB1-204ENST00000399084 RBM41Q96IZ5 413 aaKnown RBP18.82■□□□□ 0.6
HLA-DQB1-204ENST00000399084 C11orf70Q9BRQ4 267 aa18.82■□□□□ 0.6
HLA-DQB1-204ENST00000399084 SYT17Q9BSW7 474 aa18.82■□□□□ 0.6
HLA-DQB1-204ENST00000399084 STMN4Q9H169 189 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms