RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 NT5DC4Q86YG4 428 aa15.23■□□□□ 0.03
HLA-DQB1-202ENST00000399079 C1orf127Q8N9H9 656 aa15.23■□□□□ 0.03
HLA-DQB1-202ENST00000399079 XXYLT1Q8NBI6 393 aa15.23■□□□□ 0.03
HLA-DQB1-202ENST00000399079 SENP8Q96LD8 212 aa15.23■□□□□ 0.03
HLA-DQB1-202ENST00000399079 MTMR12Q9C0I1 747 aa15.23■□□□□ 0.03
HLA-DQB1-202ENST00000399079 FBXL5Q9UKA1 691 aa15.23■□□□□ 0.03
HLA-DQB1-202ENST00000399079 FBXW11Q9UKB1 542 aa15.23■□□□□ 0.03
HLA-DQB1-202ENST00000399079 TRIOO75962 3097 aa15.23■□□□□ 0.03
HLA-DQB1-202ENST00000399079 WDR27A2RRH5 827 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 C1RP00736 705 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 ITGB3P05106 788 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 POLR2BP30876 1174 aaKnown RBP15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 SNRPFP62306 86 aaKnown RBP15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 YWHAHQ04917 246 aaPredicted RBP15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 CTXN3Q4LDR2 81 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 SMYD4Q8IYR2 804 aaPredicted RBP15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 CSGALNACT2Q8N6G5 542 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 APPL2Q8NEU8 664 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 OR5B17Q8NGF7 314 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 CXorf38Q8TB03 319 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 CACTINQ8WUQ7 758 aaKnown RBP15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 CCDC47Q96A33 483 aaKnown RBP15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 ZNF707Q96C28 371 aaPredicted RBP15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 RIPOR3Q96MK2 946 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 POP1Q99575 1024 aaKnown RBP15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 KIAA1586Q9HCI6 787 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 TSHZ2Q9NRE2 1034 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 DPP7Q9UHL4 492 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 SCN1AP35498 2009 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 H7C4K7 107 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 EXOC3O60645 756 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 DLATP10515 647 aaKnown RBP15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 MTHFRP42898 656 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 KCNB1Q14721 858 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 ZNF280DQ6N043 979 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 C15orf39Q6ZRI6 1047 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 C12orf56Q8IXR9 622 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 HDAC7Q8WUI4 952 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 CCDC127Q96BQ5 260 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 BORCS6Q96GS4 357 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 CCDC34Q96HJ3 373 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 INTS13Q9NVM9 706 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 CGNQ9P2M7 1197 aaKnown RBP15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 SIX4Q9UIU6 781 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 AGAP1Q9UPQ3 857 aa15.22■□□□□ 0.03
HLA-DQB1-202ENST00000399079 LOC730098B7Z3J9 87 aa15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 PDXKO00764 312 aa15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 ZMYND10O75800 440 aa15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 ABLIM3O94929 683 aa15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 OAZ2O95190 189 aa15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 C8AP07357 584 aa15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 KRT19P08727 400 aa15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 OR4Q2P0C623 313 aa15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 TMEM191BP0C7N4 346 aa15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 TAF6P49848 677 aa15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 CYP24A1Q07973 514 aa15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 OVOS1Q6IE37 1185 aa15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 ELMSAN1Q6PJG2 1045 aa15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 USP37Q86T82 979 aa15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 CMASQ8NFW8 434 aaPredicted RBP15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 ZNF461Q8TAF7 563 aa15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 SLC7A14Q8TBB6 771 aa15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 SMG7Q92540 1137 aaKnown RBP15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 TIGD1Q96MW7 591 aa15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 NECTIN4Q96NY8 510 aa15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 GZF1Q9H116 711 aaPredicted RBP15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 PCDHA5Q9Y5H7 936 aa15.21■□□□□ 0.03
HLA-DQB1-202ENST00000399079 KPNA7A9QM74 516 aa15.2■□□□□ 0.02
HLA-DQB1-202ENST00000399079 CYB561D2O14569 222 aa15.2■□□□□ 0.02
HLA-DQB1-202ENST00000399079 ODC1P11926 461 aa15.2■□□□□ 0.02
HLA-DQB1-202ENST00000399079 TNNI1P19237 187 aa15.2■□□□□ 0.02
HLA-DQB1-202ENST00000399079 CASP4P49662 377 aa15.2■□□□□ 0.02
HLA-DQB1-202ENST00000399079 CDR1P51861 262 aa15.2■□□□□ 0.02
HLA-DQB1-202ENST00000399079 SURF1Q15526 300 aa15.2■□□□□ 0.02
HLA-DQB1-202ENST00000399079 LIN9Q5TKA1 542 aa15.2■□□□□ 0.02
HLA-DQB1-202ENST00000399079 GOLGA5Q8TBA6 731 aa15.2■□□□□ 0.02
HLA-DQB1-202ENST00000399079 PLEKHO2Q8TD55 490 aa15.2■□□□□ 0.02
HLA-DQB1-202ENST00000399079 ANKRD36BP1Q96IX9 119 aa15.2■□□□□ 0.02
HLA-DQB1-202ENST00000399079 FNBP1Q96RU3 617 aa15.2■□□□□ 0.02
HLA-DQB1-202ENST00000399079 PRKD2Q9BZL6 878 aa15.2■□□□□ 0.02
HLA-DQB1-202ENST00000399079 DMAC2Q9NW81 257 aa15.2■□□□□ 0.02
HLA-DQB1-202ENST00000399079 ZDHHC7Q9NXF8 308 aa15.2■□□□□ 0.02
HLA-DQB1-202ENST00000399079 ITGA11Q9UKX5 1188 aa15.2■□□□□ 0.02
HLA-DQB1-202ENST00000399079 MTCL1Q9Y4B5 1905 aaKnown RBP15.2■□□□□ 0.02
HLA-DQB1-202ENST00000399079 C2orf16Q68DN1 1984 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 C2CD4DB7Z1M9 353 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 CCL16O15467 120 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 SEC24AO95486 1093 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 NR3C1P04150 777 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 CPB1P15086 417 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 ATF2P15336 505 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 TYMPP19971 482 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 PSMD6Q15008 389 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 DUOXA2Q1HG44 320 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 SV2CQ496J9 727 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 PPM1LQ5SGD2 360 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 WSCD1Q658N2 575 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 RNF135Q8IUD6 432 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 WDR49Q8IV35 697 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 GUF1Q8N442 669 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms