RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 PIK3R5Q8WYR1 880 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 PPP2R3CQ969Q6 453 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 EEF2KMTQ96G04 330 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 FAM84AQ96KN4 292 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 CDCA3Q99618 268 aaPredicted RBP11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 TTPALQ9BTX7 342 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 FNIP2Q9P278 1114 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 PCDHB8Q9UN66 801 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 KPNA7A9QM74 516 aa11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 I3L4J1 428 aa11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 SPTLC1O15269 473 aa11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 LETM1O95202 739 aaPredicted RBP11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 STAU1O95793 577 aaKnown RBP11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 C1RP00736 705 aa11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 CST3P01034 146 aaPredicted RBP11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 CYP11A1P05108 521 aa11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 TKTP29401 623 aaKnown RBP11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 GTF2H1P32780 548 aa11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 CREMQ03060 361 aa11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 HYAL1Q12794 435 aa11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 DUSP6Q16828 381 aa11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 ZACNQ401N2 412 aa11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 TDRD10Q5VZ19 366 aaKnown RBP11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 MAFAQ8NHW3 353 aaPredicted RBP11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 AUTS2Q8WXX7 1259 aa11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 B3GALT6Q96L58 329 aa11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 KLHL5Q96PQ7 755 aa11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 VRTNQ9H8Y1 702 aa11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 METTL14Q9HCE5 456 aaKnown RBP11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 GDAP2Q9NXN4 497 aa11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 AGAP1Q9UPQ3 857 aa11.26□□□□□ -0.61
CYCSP55-201ENST00000399027 PTPRDP23468 1912 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 C2orf16Q68DN1 1984 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 ARHGEF37A1IGU5 675 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 NCK2O43639 380 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 TBC1D4O60343 1298 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 CLASP2O75122 1294 aaKnown RBP11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 OAZ2O95190 189 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 CSPG5O95196 566 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 VNN1O95497 513 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 FGFR1OPO95684 399 aaKnown RBP11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 GNA14O95837 355 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 KRT19P08727 400 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 CNPP09543 421 aaKnown RBP11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 TRIM49P0CI25 452 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 TRIM49CP0CI26 452 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 TYMPP19971 482 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 ATICP31939 592 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 NRIP1P48552 1158 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 PPP3CAQ08209 521 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 PSMD5Q16401 504 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 STX1AQ16623 288 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 CTC1Q2NKJ3 1217 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 VARS2Q5ST30 1063 aaKnown RBP11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 KIAA1841Q6NSI8 718 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 PRSS55Q6UWB4 352 aaPredicted RBP11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 DSTYKQ6XUX3 929 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 TMEM184AQ6ZMB5 413 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 ANKS3Q6ZW76 656 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 SV2AQ7L0J3 742 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 LIMS2Q7Z4I7 341 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 CEP57Q86XR8 500 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 MICALL1Q8N3F8 863 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 EFHBQ8N7U6 833 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 APPL2Q8NEU8 664 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 RIN2Q8WYP3 895 aaPredicted RBP11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 SLC35C1Q96A29 364 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 SENP8Q96LD8 212 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 SRRTQ9BXP5 876 aaKnown RBP11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 EMILIN2Q9BXX0 1053 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 TLE6Q9H808 572 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 TMEM8AQ9HCN3 771 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 ANO10Q9NW15 660 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 MTRRQ9UBK8 725 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 ARMCX3Q9UH62 379 aaPredicted RBP11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 BACE2Q9Y5Z0 518 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 DENND4AQ7Z401 1863 aa11.25□□□□□ -0.61
CYCSP55-201ENST00000399027 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.24□□□□□ -0.61
CYCSP55-201ENST00000399027 TULP1O00294 542 aaPredicted RBP11.24□□□□□ -0.61
CYCSP55-201ENST00000399027 C2CD2LO14523 706 aa11.24□□□□□ -0.61
CYCSP55-201ENST00000399027 PER2O15055 1255 aa11.24□□□□□ -0.61
CYCSP55-201ENST00000399027 TEX28O15482 410 aa11.24□□□□□ -0.61
CYCSP55-201ENST00000399027 STX10O60499 249 aa11.24□□□□□ -0.61
CYCSP55-201ENST00000399027 ADH1AP07327 375 aa11.24□□□□□ -0.61
CYCSP55-201ENST00000399027 ODC1P11926 461 aa11.24□□□□□ -0.61
CYCSP55-201ENST00000399027 GTF2F1P35269 517 aaKnown RBP eCLIP11.24□□□□□ -0.61
CYCSP55-201ENST00000399027 NDUFV1P49821 464 aa11.24□□□□□ -0.61
CYCSP55-201ENST00000399027 CLCN4P51793 760 aa11.24□□□□□ -0.61
CYCSP55-201ENST00000399027 TYRO3Q06418 890 aa11.24□□□□□ -0.61
CYCSP55-201ENST00000399027 MYO1EQ12965 1108 aa11.24□□□□□ -0.61
CYCSP55-201ENST00000399027 ADAM15Q13444 863 aa11.24□□□□□ -0.61
CYCSP55-201ENST00000399027 NFKBIBQ15653 356 aa11.24□□□□□ -0.61
CYCSP55-201ENST00000399027 CCDC85BQ15834 202 aaPredicted RBP11.24□□□□□ -0.61
CYCSP55-201ENST00000399027 SLC8B1Q6J4K2 584 aa11.24□□□□□ -0.61
CYCSP55-201ENST00000399027 DPH6Q7L8W6 267 aa11.24□□□□□ -0.61
CYCSP55-201ENST00000399027 RBM23Q86U06 439 aaKnown RBP11.24□□□□□ -0.61
CYCSP55-201ENST00000399027 PPFIBP1Q86W92 1011 aa11.24□□□□□ -0.61
CYCSP55-201ENST00000399027 IRF2BP1Q8IU81 584 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms