RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 KIAA1524Q8TCG1 905 aa17.87■□□□□ 0.45
CDH23-204ENST00000398792 NXF1Q9UBU9 619 aaKnown RBP17.87■□□□□ 0.45
CDH23-204ENST00000398792 BZW2Q9Y6E2 419 aaKnown RBP17.87■□□□□ 0.45
CDH23-204ENST00000398792 TDRD15B5MCY1 1934 aaKnown RBP17.87■□□□□ 0.45
CDH23-204ENST00000398792 POMCP01189 267 aa17.87■□□□□ 0.45
CDH23-204ENST00000398792 FGFR1P11362 822 aa17.87■□□□□ 0.45
CDH23-204ENST00000398792 P4HA1P13674 534 aa17.87■□□□□ 0.45
CDH23-204ENST00000398792 EIF4A3P38919 411 aaKnown RBP17.87■□□□□ 0.45
CDH23-204ENST00000398792 USP8P40818 1118 aa17.87■□□□□ 0.45
CDH23-204ENST00000398792 PNPLA4P41247 253 aa17.87■□□□□ 0.45
CDH23-204ENST00000398792 MFSD5Q6N075 450 aa17.87■□□□□ 0.45
CDH23-204ENST00000398792 TOGARAM2Q6ZUX3 1019 aa17.87■□□□□ 0.45
CDH23-204ENST00000398792 CCDC170Q8IYT3 715 aa17.87■□□□□ 0.45
CDH23-204ENST00000398792 HAUS4Q9H6D7 363 aa17.87■□□□□ 0.45
CDH23-204ENST00000398792 SCN1AP35498 2009 aa17.86■□□□□ 0.45
CDH23-204ENST00000398792 NDUFA10O95299 355 aa17.86■□□□□ 0.45
CDH23-204ENST00000398792 KRT5P13647 590 aa17.86■□□□□ 0.45
CDH23-204ENST00000398792 CSF2RAP15509 400 aa17.86■□□□□ 0.45
CDH23-204ENST00000398792 MSNP26038 577 aaKnown RBP17.86■□□□□ 0.45
CDH23-204ENST00000398792 CYLC1P35663 651 aaPredicted RBP17.86■□□□□ 0.45
CDH23-204ENST00000398792 KIF11P52732 1056 aa17.86■□□□□ 0.45
CDH23-204ENST00000398792 TNNC1P63316 161 aa17.86■□□□□ 0.45
CDH23-204ENST00000398792 PTK2Q05397 1052 aa17.86■□□□□ 0.45
CDH23-204ENST00000398792 ASTE1Q2TB18 679 aaPredicted RBP17.86■□□□□ 0.45
CDH23-204ENST00000398792 SMYD5Q6GMV2 418 aa17.86■□□□□ 0.45
CDH23-204ENST00000398792 CCDC42Q96M95 316 aa17.86■□□□□ 0.45
CDH23-204ENST00000398792 DESI2Q9BSY9 194 aa17.86■□□□□ 0.45
CDH23-204ENST00000398792 DEF6Q9H4E7 631 aa17.86■□□□□ 0.45
CDH23-204ENST00000398792 SMYD3Q9H7B4 428 aa17.86■□□□□ 0.45
CDH23-204ENST00000398792 CNTN6Q9UQ52 1028 aa17.86■□□□□ 0.45
CDH23-204ENST00000398792 CYP26A1O43174 497 aa17.85■□□□□ 0.45
CDH23-204ENST00000398792 CLCN1P35523 988 aa17.85■□□□□ 0.45
CDH23-204ENST00000398792 RAP1GAPP47736 663 aa17.85■□□□□ 0.45
CDH23-204ENST00000398792 TAF6P49848 677 aa17.85■□□□□ 0.45
CDH23-204ENST00000398792 YWHAEP62258 255 aaKnown RBP17.85■□□□□ 0.45
CDH23-204ENST00000398792 NOMO2Q5JPE7 1267 aa17.85■□□□□ 0.45
CDH23-204ENST00000398792 ZNF571Q7Z3V5 609 aaPredicted RBP17.85■□□□□ 0.45
CDH23-204ENST00000398792 CRIPAKQ8N1N5 446 aa17.85■□□□□ 0.45
CDH23-204ENST00000398792 TMEM199Q8N511 208 aa17.85■□□□□ 0.45
CDH23-204ENST00000398792 URGCPQ8TCY9 931 aa17.85■□□□□ 0.45
CDH23-204ENST00000398792 EPS8L1Q8TE68 723 aa17.85■□□□□ 0.45
CDH23-204ENST00000398792 SYT11Q9BT88 431 aa17.85■□□□□ 0.45
CDH23-204ENST00000398792 SDCBP2Q9H190 292 aa17.85■□□□□ 0.45
CDH23-204ENST00000398792 CISHQ9NSE2 258 aa17.85■□□□□ 0.45
CDH23-204ENST00000398792 PCDHB7Q9Y5E2 793 aa17.85■□□□□ 0.45
CDH23-204ENST00000398792 PCDHB4Q9Y5E5 795 aa17.85■□□□□ 0.45
CDH23-204ENST00000398792 EPN1Q9Y6I3 576 aaPredicted RBP17.85■□□□□ 0.45
CDH23-204ENST00000398792 CASTOR2A6NHX0 329 aa17.84■□□□□ 0.45
CDH23-204ENST00000398792 ESPNB1AK53 854 aa17.84■□□□□ 0.45
CDH23-204ENST00000398792 PFKMP08237 780 aa17.84■□□□□ 0.45
CDH23-204ENST00000398792 WEE2P0C1S8 567 aa17.84■□□□□ 0.45
CDH23-204ENST00000398792 CD58P19256 250 aa17.84■□□□□ 0.45
CDH23-204ENST00000398792 ANXA13P27216 316 aa17.84■□□□□ 0.45
CDH23-204ENST00000398792 ZNF132P52740 706 aa17.84■□□□□ 0.45
CDH23-204ENST00000398792 TUSC3Q13454 348 aa17.84■□□□□ 0.45
CDH23-204ENST00000398792 IKBKEQ14164 716 aa17.84■□□□□ 0.45
CDH23-204ENST00000398792 SV2CQ496J9 727 aa17.84■□□□□ 0.45
CDH23-204ENST00000398792 TMEM270Q6UE05 265 aa17.84■□□□□ 0.45
CDH23-204ENST00000398792 NPAS4Q8IUM7 802 aa17.84■□□□□ 0.45
CDH23-204ENST00000398792 RBBP8NLQ8NC74 664 aaPredicted RBP17.84■□□□□ 0.45
CDH23-204ENST00000398792 OLIG1Q8TAK6 271 aa17.84■□□□□ 0.45
CDH23-204ENST00000398792 CYP3A43Q9HB55 503 aa17.84■□□□□ 0.45
CDH23-204ENST00000398792 SPTLC3Q9NUV7 552 aa17.84■□□□□ 0.45
CDH23-204ENST00000398792 CACNG4Q9UBN1 327 aa17.84■□□□□ 0.45
CDH23-204ENST00000398792 LRFN2Q9ULH4 789 aa17.84■□□□□ 0.45
CDH23-204ENST00000398792 TTC3P53804 2025 aa17.84■□□□□ 0.45
CDH23-204ENST00000398792 EIF3CLB5ME19 914 aaKnown RBP17.83■□□□□ 0.45
CDH23-204ENST00000398792 PODXLO00592 558 aa17.83■□□□□ 0.45
CDH23-204ENST00000398792 SPTLC1O15269 473 aa17.83■□□□□ 0.45
CDH23-204ENST00000398792 HOXA2O43364 376 aa17.83■□□□□ 0.45
CDH23-204ENST00000398792 AKR1B10O60218 316 aa17.83■□□□□ 0.45
CDH23-204ENST00000398792 RPL9P32969 192 aaKnown RBP17.83■□□□□ 0.45
CDH23-204ENST00000398792 PDE6CP51160 858 aa17.83■□□□□ 0.45
CDH23-204ENST00000398792 CLCNKBP51801 687 aa17.83■□□□□ 0.45
CDH23-204ENST00000398792 SLC47A2Q86VL8 602 aa17.83■□□□□ 0.45
CDH23-204ENST00000398792 C17orf53Q8N3J3 647 aaPredicted RBP17.83■□□□□ 0.45
CDH23-204ENST00000398792 ACRBPQ8NEB7 543 aa17.83■□□□□ 0.45
CDH23-204ENST00000398792 EIF3CQ99613 913 aaKnown RBP17.83■□□□□ 0.45
CDH23-204ENST00000398792 FAM124BQ9H5Z6 455 aaPredicted RBP17.83■□□□□ 0.45
CDH23-204ENST00000398792 RNF216Q9NWF9 866 aaPredicted RBP17.83■□□□□ 0.45
CDH23-204ENST00000398792 PCDH10Q9P2E7 1040 aa17.83■□□□□ 0.45
CDH23-204ENST00000398792 NOCTQ9UK39 431 aaKnown RBP17.83■□□□□ 0.45
CDH23-204ENST00000398792 SNX9Q9Y5X1 595 aa17.83■□□□□ 0.45
CDH23-204ENST00000398792 ADGRG1Q9Y653 693 aa17.83■□□□□ 0.45
CDH23-204ENST00000398792 MKI67P46013 3256 aaKnown RBP17.83■□□□□ 0.44
CDH23-204ENST00000398792 KPNA7A9QM74 516 aa17.83■□□□□ 0.44
CDH23-204ENST00000398792 LCA5LO95447 670 aa17.83■□□□□ 0.44
CDH23-204ENST00000398792 CYP11B1P15538 503 aa17.83■□□□□ 0.44
CDH23-204ENST00000398792 CDH8P55286 799 aa17.83■□□□□ 0.44
CDH23-204ENST00000398792 INCA1Q0VD86 236 aa17.83■□□□□ 0.44
CDH23-204ENST00000398792 UPP1Q16831 310 aa17.83■□□□□ 0.44
CDH23-204ENST00000398792 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.83■□□□□ 0.44
CDH23-204ENST00000398792 NOP9Q86U38 636 aaKnown RBP17.83■□□□□ 0.44
CDH23-204ENST00000398792 ABI1Q8IZP0 508 aa17.83■□□□□ 0.44
CDH23-204ENST00000398792 SLC20A1Q8WUM9 679 aa17.83■□□□□ 0.44
CDH23-204ENST00000398792 UROC1Q96N76 676 aa17.83■□□□□ 0.44
CDH23-204ENST00000398792 MMS19Q96T76 1030 aa17.83■□□□□ 0.44
CDH23-204ENST00000398792 ACP6Q9NPH0 428 aa17.83■□□□□ 0.44
CDH23-204ENST00000398792 KCND1Q9NSA2 647 aa17.83■□□□□ 0.44
CDH23-204ENST00000398792 TBC1D13Q9NVG8 400 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms