RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 MDM2Q00987 491 aaPredicted RBP14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 ZNF579Q8NAF0 562 aaKnown RBP14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 OTULINQ96BN8 352 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 AGAP3Q96P47 875 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 TRIM62Q9BVG3 475 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 TRIM54Q9BYV2 358 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 ALDH8A1Q9H2A2 487 aaPredicted RBP14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 ADA2Q9NZK5 511 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 APOL1O14791 398 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 KIAA0391O15091 583 aaKnown RBP14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 ZSCAN9O15535 394 aaPredicted RBP14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 FBXO38Q6PIJ6 1188 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 TMEM169Q96HH4 297 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 VTA1Q9NP79 307 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 TEX33O43247 280 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 SHMT1P34896 483 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 FSCBQ5H9T9 825 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 KAZALD1Q96I82 304 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 ADAM33Q9BZ11 813 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 DDX47Q9H0S4 455 aaKnown RBP14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 PXMP2Q9NR77 195 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 AIPL1Q9NZN9 384 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 TUBE1Q9UJT0 475 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 PFDN1O60925 122 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 CASP7P55210 303 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 PDIA5Q14554 519 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 RGS9BPQ6ZS82 235 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 TRIML2Q8N7C3 387 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 ABTB1Q969K4 478 aaPredicted RBP14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 ZCWPW1Q9H0M4 648 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 PRMT7Q9NVM4 692 aaPredicted RBP14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 KLK14Q9P0G3 267 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 BEND6Q5SZJ8 279 aaPredicted RBP14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 CDKL3Q8IVW4 592 aaPredicted RBP14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 RFWD2Q8NHY2 731 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 BTBD6Q96KE9 485 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 PARVAQ9NVD7 372 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 ZFP69BQ9UJL9 534 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 CD4P01730 458 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 KCNA2P16389 499 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 MAP4P27816 1152 aaKnown RBP14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 GGCXP38435 758 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 NLRP11P59045 1033 aaKnown RBP14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 ARHGEF7Q14155 803 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 COBLL1Q53SF7 1204 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 ZC3H12BQ5HYM0 836 aaKnown RBP14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 RFX8Q6ZV50 586 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 MOB2Q70IA6 237 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 ANKMY2Q8IV38 441 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 ABHD16BQ9H3Z7 469 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 PCDHB8Q9UN66 801 aa14.98□□□□□ -0.01
PCDHA11-201ENST00000398640 NALCNQ8IZF0 1738 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 CCDC151A5D8V7 595 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 EIF4E1BA6NMX2 242 aaKnown RBP14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 CHRNA3P32297 505 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 HSD17B4P51659 736 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 PDCLQ13371 301 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 TAGAPQ8N103 731 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 NKX2-3Q8TAU0 364 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 NRBF2Q96F24 287 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 PHF20Q9BVI0 1012 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 NMRK2Q9NPI5 230 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 IRF6O14896 467 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 NUMBP49757 651 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 MKRN4PQ13434 485 aaPredicted RBP14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 EFTUD2Q15029 972 aaKnown RBP eCLIP14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 LRRC14Q15048 493 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 TLK2Q86UE8 772 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 EFHBQ8N7U6 833 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 PABPC5Q96DU9 382 aaKnown RBP14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 EPAS1Q99814 870 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 SCOCQ9UIL1 159 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 SYCE1LA8MT33 242 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 DCTN3O75935 186 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 MAGOHP61326 146 aaKnown RBP14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 RBP5P82980 135 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 ANKS3Q6ZW76 656 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 SLC30A5Q8TAD4 765 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 FAM49BQ9NUQ9 324 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 DDX56Q9NY93 547 aaKnown RBP14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 ABI2Q9NYB9 513 aaPredicted RBP14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 EHD2Q9NZN4 543 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 SLC26A4O43511 780 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 AMHP03971 560 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 PYGLP06737 847 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 PCSK7Q16549 785 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 RHOT1Q8IXI2 618 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 CPA5Q8WXQ8 436 aa14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 DDX4Q9NQI0 724 aaKnown RBP14.97□□□□□ -0.01
PCDHA11-201ENST00000398640 GAS2O43903 313 aaKnown RBP14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 ETFBP38117 255 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 POLE2P56282 527 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 ACVR2BQ13705 512 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 CRY2Q49AN0 593 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 ADGRA1Q86SQ6 560 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 MYO1DO94832 1006 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 HOXC6P09630 235 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 GUCY2CP25092 1073 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 ATF7IP2Q5U623 682 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms