RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 NLRP12P59046 1061 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 MCCD1P59942 119 aaPredicted RBP17.01■□□□□ 0.31
MBD1-207ENST00000398488 FKBP3Q00688 224 aaKnown RBP17.01■□□□□ 0.31
MBD1-207ENST00000398488 LRRC63Q05C16 580 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 ELAVL2Q12926 359 aaKnown RBP17.01■□□□□ 0.31
MBD1-207ENST00000398488 STIM1Q13586 685 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 MRPL58Q14197 206 aaKnown RBP17.01■□□□□ 0.31
MBD1-207ENST00000398488 PSMD5Q16401 504 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 VARS2Q5ST30 1063 aaKnown RBP17.01■□□□□ 0.31
MBD1-207ENST00000398488 TMC2Q8TDI7 906 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 PABPC5Q96DU9 382 aaKnown RBP17.01■□□□□ 0.31
MBD1-207ENST00000398488 ANKRD36BP1Q96IX9 119 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 TSG101Q99816 390 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 CLDND1Q9NY35 253 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 ITGA11Q9UKX5 1188 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 BARX2Q9UMQ3 279 aaPredicted RBP17.01■□□□□ 0.31
MBD1-207ENST00000398488 PCDHB8Q9UN66 801 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 HCFC2Q9Y5Z7 792 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 PLXNA3P51805 1871 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 MAPK13O15264 365 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 TRAPPC3O43617 180 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 TNNC2P02585 160 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 SPATA31D3P0C874 917 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 TAF6P49848 677 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 VAMP7P51809 220 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 PAK1Q13153 545 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 DSTYKQ6XUX3 929 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 C15orf39Q6ZRI6 1047 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 EP400NLQ6ZTU2 488 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 SPATA31D4Q6ZUB0 917 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 PALB2Q86YC2 1186 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 UBE2ZQ9H832 354 aaPredicted RBP17.01■□□□□ 0.31
MBD1-207ENST00000398488 MTRRQ9UBK8 725 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 STK39Q9UEW8 545 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 KPNA7A9QM74 516 aa17■□□□□ 0.31
MBD1-207ENST00000398488 H3BQ06 376 aaPredicted RBP17■□□□□ 0.31
MBD1-207ENST00000398488 KLRC2P26717 231 aa17■□□□□ 0.31
MBD1-207ENST00000398488 GCLMP48507 274 aa17■□□□□ 0.31
MBD1-207ENST00000398488 CLCN4P51793 760 aa17■□□□□ 0.31
MBD1-207ENST00000398488 RBP5P82980 135 aa17■□□□□ 0.31
MBD1-207ENST00000398488 BFSP1Q12934 665 aa17■□□□□ 0.31
MBD1-207ENST00000398488 CCDC183Q5T5S1 534 aa17■□□□□ 0.31
MBD1-207ENST00000398488 MLKLQ8NB16 471 aa17■□□□□ 0.31
MBD1-207ENST00000398488 RTP3Q9BQQ7 232 aa17■□□□□ 0.31
MBD1-207ENST00000398488 FNIP2Q9P278 1114 aa17■□□□□ 0.31
MBD1-207ENST00000398488 GTF3C5Q9Y5Q8 519 aaPredicted RBP17■□□□□ 0.31
MBD1-207ENST00000398488 TSC2P49815 1807 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 CYB561D2O14569 222 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 SYN3O14994 580 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 KCNA5P22460 613 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 PPP1R2P41236 205 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 MYL6P60660 151 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 CLUL1Q15846 466 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 WSCD1Q658N2 575 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 CAVIN1Q6NZI2 390 aaKnown RBP16.99■□□□□ 0.31
MBD1-207ENST00000398488 LILRA6Q6PI73 481 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 SV2AQ7L0J3 742 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 GPR65Q8IYL9 337 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 LRRC52Q8N7C0 313 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 C12orf76Q8N812 135 aaPredicted RBP16.99■□□□□ 0.31
MBD1-207ENST00000398488 HLA-CQ95604 372 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 HPDLQ96IR7 371 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 TMEM209Q96SK2 561 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 CDCA3Q99618 268 aaPredicted RBP16.99■□□□□ 0.31
MBD1-207ENST00000398488 MKNK1Q9BUB5 465 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 SRRTQ9BXP5 876 aaKnown RBP16.99■□□□□ 0.31
MBD1-207ENST00000398488 EMILIN2Q9BXX0 1053 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 XYLT2Q9H1B5 865 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 MMRN2Q9H8L6 949 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 RWDD2AQ9UIY3 292 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 CDH22Q9UJ99 828 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 FBXL5Q9UKA1 691 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 L1RE1Q9UN81 338 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 UNC80Q8N2C7 3258 aa16.99■□□□□ 0.31
MBD1-207ENST00000398488 HCRTO43612 131 aa16.98■□□□□ 0.31
MBD1-207ENST00000398488 OR1D2P34982 312 aa16.98■□□□□ 0.31
MBD1-207ENST00000398488 CDR1P51861 262 aa16.98■□□□□ 0.31
MBD1-207ENST00000398488 BMS1Q14692 1282 aaKnown RBP16.98■□□□□ 0.31
MBD1-207ENST00000398488 ZACNQ401N2 412 aa16.98■□□□□ 0.31
MBD1-207ENST00000398488 SYCE2Q6PIF2 218 aa16.98■□□□□ 0.31
MBD1-207ENST00000398488 FOXR2Q6PJQ5 311 aa16.98■□□□□ 0.31
MBD1-207ENST00000398488 TMEM184AQ6ZMB5 413 aa16.98■□□□□ 0.31
MBD1-207ENST00000398488 INTS8Q75QN2 995 aaKnown RBP16.98■□□□□ 0.31
MBD1-207ENST00000398488 FILIP1Q7Z7B0 1213 aa16.98■□□□□ 0.31
MBD1-207ENST00000398488 OSTM1Q86WC4 334 aa16.98■□□□□ 0.31
MBD1-207ENST00000398488 IRF2BP1Q8IU81 584 aa16.98■□□□□ 0.31
MBD1-207ENST00000398488 MSLNLQ96KJ4 702 aa16.98■□□□□ 0.31
MBD1-207ENST00000398488 APOL5Q9BWW9 433 aa16.98■□□□□ 0.31
MBD1-207ENST00000398488 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.98■□□□□ 0.31
MBD1-207ENST00000398488 SSX2IPQ9Y2D8 614 aa16.98■□□□□ 0.31
MBD1-207ENST00000398488 BACE2Q9Y5Z0 518 aa16.98■□□□□ 0.31
MBD1-207ENST00000398488 CDY1Q9Y6F8 540 aa16.98■□□□□ 0.31
MBD1-207ENST00000398488 BICDL2A1A5D9 508 aa16.97■□□□□ 0.31
MBD1-207ENST00000398488 SLC16A3O15427 465 aaKnown RBP16.97■□□□□ 0.31
MBD1-207ENST00000398488 TGM5O43548 720 aa16.97■□□□□ 0.31
MBD1-207ENST00000398488 OAZ2O95190 189 aa16.97■□□□□ 0.31
MBD1-207ENST00000398488 CYP11A1P05108 521 aa16.97■□□□□ 0.31
MBD1-207ENST00000398488 OR4Q2P0C623 313 aa16.97■□□□□ 0.31
MBD1-207ENST00000398488 EPB41P11171 864 aaKnown RBP16.97■□□□□ 0.31
MBD1-207ENST00000398488 NDUFV1P49821 464 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms