RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 PSMD2Q13200 908 aa18.08■□□□□ 0.48
APTR-201ENST00000398043 SNW1Q13573 536 aaKnown RBP18.08■□□□□ 0.48
APTR-201ENST00000398043 KNOP1Q1ED39 458 aaKnown RBP18.08■□□□□ 0.48
APTR-201ENST00000398043 CBWD2Q8IUF1 395 aa18.08■□□□□ 0.48
APTR-201ENST00000398043 NELFCDQ8IXH7 590 aa18.08■□□□□ 0.48
APTR-201ENST00000398043 APPL2Q8NEU8 664 aa18.08■□□□□ 0.48
APTR-201ENST00000398043 PRKD2Q9BZL6 878 aa18.08■□□□□ 0.48
APTR-201ENST00000398043 PDE11AQ9HCR9 933 aa18.08■□□□□ 0.48
APTR-201ENST00000398043 CIZ1Q9ULV3 898 aaPredicted RBP18.08■□□□□ 0.48
APTR-201ENST00000398043 DENND4CQ5VZ89 1909 aa18.08■□□□□ 0.48
APTR-201ENST00000398043 PTPRJQ12913 1337 aa18.07■□□□□ 0.48
APTR-201ENST00000398043 WDR27A2RRH5 827 aa18.07■□□□□ 0.48
APTR-201ENST00000398043 C2CD4DB7Z1M9 353 aa18.07■□□□□ 0.48
APTR-201ENST00000398043 H7C4K7 107 aa18.07■□□□□ 0.48
APTR-201ENST00000398043 RHOBTB3O94955 611 aa18.07■□□□□ 0.48
APTR-201ENST00000398043 RPN1P04843 607 aaKnown RBP18.07■□□□□ 0.48
APTR-201ENST00000398043 HOXA9P31269 272 aa18.07■□□□□ 0.48
APTR-201ENST00000398043 ELMSAN1Q6PJG2 1045 aa18.07■□□□□ 0.48
APTR-201ENST00000398043 C1orf127Q8N9H9 656 aa18.07■□□□□ 0.48
APTR-201ENST00000398043 ZNF461Q8TAF7 563 aa18.07■□□□□ 0.48
APTR-201ENST00000398043 TMEM174Q8WUU8 243 aa18.07■□□□□ 0.48
APTR-201ENST00000398043 FAM84AQ96KN4 292 aa18.07■□□□□ 0.48
APTR-201ENST00000398043 KCTD10Q9H3F6 313 aa18.07■□□□□ 0.48
APTR-201ENST00000398043 C11orf16Q9NQ32 467 aa18.07■□□□□ 0.48
APTR-201ENST00000398043 EXOC1Q9NV70 894 aa18.07■□□□□ 0.48
APTR-201ENST00000398043 USTQ9Y2C2 406 aa18.07■□□□□ 0.48
APTR-201ENST00000398043 CLIC2O15247 247 aa18.06■□□□□ 0.48
APTR-201ENST00000398043 CYP11A1P05108 521 aa18.06■□□□□ 0.48
APTR-201ENST00000398043 POU2F2P09086 479 aa18.06■□□□□ 0.48
APTR-201ENST00000398043 TYMPP19971 482 aa18.06■□□□□ 0.48
APTR-201ENST00000398043 UVSSAQ2YD98 709 aa18.06■□□□□ 0.48
APTR-201ENST00000398043 CTXN3Q4LDR2 81 aa18.06■□□□□ 0.48
APTR-201ENST00000398043 RTL10Q7L3V2 364 aa18.06■□□□□ 0.48
APTR-201ENST00000398043 SMG7Q92540 1137 aaKnown RBP18.06■□□□□ 0.48
APTR-201ENST00000398043 SENP8Q96LD8 212 aa18.06■□□□□ 0.48
APTR-201ENST00000398043 GZF1Q9H116 711 aaPredicted RBP18.06■□□□□ 0.48
APTR-201ENST00000398043 KIAA1586Q9HCI6 787 aa18.06■□□□□ 0.48
APTR-201ENST00000398043 WDR6Q9NNW5 1121 aaKnown RBP18.06■□□□□ 0.48
APTR-201ENST00000398043 CGNQ9P2M7 1197 aaKnown RBP18.06■□□□□ 0.48
APTR-201ENST00000398043 TIMM13Q9Y5L4 95 aaPredicted RBP18.06■□□□□ 0.48
APTR-201ENST00000398043 PTPRDP23468 1912 aa18.06■□□□□ 0.48
APTR-201ENST00000398043 ZNF233A6NK53 670 aa18.05■□□□□ 0.48
APTR-201ENST00000398043 N4BP1O75113 896 aaKnown RBP18.05■□□□□ 0.48
APTR-201ENST00000398043 C8AP07357 584 aa18.05■□□□□ 0.48
APTR-201ENST00000398043 HNRNPA1P09651 372 aaKnown RBP eCLIP18.05■□□□□ 0.48
APTR-201ENST00000398043 ATF2P15336 505 aa18.05■□□□□ 0.48
APTR-201ENST00000398043 ZNF280DQ6N043 979 aa18.05■□□□□ 0.48
APTR-201ENST00000398043 ZDHHC14Q8IZN3 488 aa18.05■□□□□ 0.48
APTR-201ENST00000398043 DMAC2Q9NW81 257 aa18.05■□□□□ 0.48
APTR-201ENST00000398043 MUTYHQ9UIF7 546 aa18.05■□□□□ 0.48
APTR-201ENST00000398043 SIX4Q9UIU6 781 aa18.05■□□□□ 0.48
APTR-201ENST00000398043 NR2E1Q9Y466 385 aa18.05■□□□□ 0.48
APTR-201ENST00000398043 ARHGEF37A1IGU5 675 aa18.04■□□□□ 0.48
APTR-201ENST00000398043 SPDYE4A6NLX3 237 aa18.04■□□□□ 0.48
APTR-201ENST00000398043 DCXO43602 365 aa18.04■□□□□ 0.48
APTR-201ENST00000398043 SEC24AO95486 1093 aa18.04■□□□□ 0.48
APTR-201ENST00000398043 VNN2O95498 520 aa18.04■□□□□ 0.48
APTR-201ENST00000398043 SP100P23497 879 aaPredicted RBP18.04■□□□□ 0.48
APTR-201ENST00000398043 TAF6P49848 677 aa18.04■□□□□ 0.48
APTR-201ENST00000398043 TFAMQ00059 246 aaKnown RBP18.04■□□□□ 0.48
APTR-201ENST00000398043 YWHAHQ04917 246 aaPredicted RBP18.04■□□□□ 0.48
APTR-201ENST00000398043 KCNB1Q14721 858 aa18.04■□□□□ 0.48
APTR-201ENST00000398043 SNRNP35Q16560 246 aaKnown RBP18.04■□□□□ 0.48
APTR-201ENST00000398043 TPGS2Q68CL5 300 aa18.04■□□□□ 0.48
APTR-201ENST00000398043 DSTYKQ6XUX3 929 aa18.04■□□□□ 0.48
APTR-201ENST00000398043 CCDC149Q6ZUS6 474 aa18.04■□□□□ 0.48
APTR-201ENST00000398043 HS2ST1Q7LGA3 356 aa18.04■□□□□ 0.48
APTR-201ENST00000398043 XXYLT1Q8NBI6 393 aa18.04■□□□□ 0.48
APTR-201ENST00000398043 OR5B17Q8NGF7 314 aa18.04■□□□□ 0.48
APTR-201ENST00000398043 SLC7A14Q8TBB6 771 aa18.04■□□□□ 0.48
APTR-201ENST00000398043 CACTINQ8WUQ7 758 aaKnown RBP18.04■□□□□ 0.48
APTR-201ENST00000398043 OXCT2Q9BYC2 517 aaPredicted RBP18.04■□□□□ 0.48
APTR-201ENST00000398043 INTS13Q9NVM9 706 aa18.04■□□□□ 0.48
APTR-201ENST00000398043 GREB1Q4ZG55 1949 aa18.04■□□□□ 0.48
APTR-201ENST00000398043 ZNF318Q5VUA4 2279 aa18.03■□□□□ 0.48
APTR-201ENST00000398043 CLUHO75153 1309 aa18.03■□□□□ 0.48
APTR-201ENST00000398043 ALADP13716 330 aa18.03■□□□□ 0.48
APTR-201ENST00000398043 FAM160A1Q05DH4 1040 aa18.03■□□□□ 0.48
APTR-201ENST00000398043 CYP24A1Q07973 514 aa18.03■□□□□ 0.48
APTR-201ENST00000398043 PSMD6Q15008 389 aa18.03■□□□□ 0.48
APTR-201ENST00000398043 SURF1Q15526 300 aa18.03■□□□□ 0.48
APTR-201ENST00000398043 PPM1LQ5SGD2 360 aa18.03■□□□□ 0.48
APTR-201ENST00000398043 LIN9Q5TKA1 542 aa18.03■□□□□ 0.48
APTR-201ENST00000398043 SLC9A9Q8IVB4 645 aa18.03■□□□□ 0.48
APTR-201ENST00000398043 TCEAL8Q8IYN2 117 aa18.03■□□□□ 0.48
APTR-201ENST00000398043 MFSD14AQ96MC6 490 aa18.03■□□□□ 0.48
APTR-201ENST00000398043 RTP3Q9BQQ7 232 aa18.03■□□□□ 0.48
APTR-201ENST00000398043 MTMR12Q9C0I1 747 aa18.03■□□□□ 0.48
APTR-201ENST00000398043 ITGA11Q9UKX5 1188 aa18.03■□□□□ 0.48
APTR-201ENST00000398043 KPNA7A9QM74 516 aa18.02■□□□□ 0.48
APTR-201ENST00000398043 PDXKO00764 312 aa18.02■□□□□ 0.48
APTR-201ENST00000398043 OBSL1O75147 1896 aa18.02■□□□□ 0.48
APTR-201ENST00000398043 ITGB3P05106 788 aa18.02■□□□□ 0.48
APTR-201ENST00000398043 ODC1P11926 461 aa18.02■□□□□ 0.48
APTR-201ENST00000398043 POLR2BP30876 1174 aaKnown RBP18.02■□□□□ 0.48
APTR-201ENST00000398043 CYP2J2P51589 502 aa18.02■□□□□ 0.48
APTR-201ENST00000398043 LMBRD2Q68DH5 695 aaPredicted RBP18.02■□□□□ 0.48
APTR-201ENST00000398043 OVOS1Q6IE37 1185 aa18.02■□□□□ 0.48
APTR-201ENST00000398043 RNF19BQ6ZMZ0 732 aa18.02■□□□□ 0.48
APTR-201ENST00000398043 WDR49Q8IV35 697 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms