RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 R3HCC1Q9Y3T6 440 aaKnown RBP27.35■■□□□ 1.97
TMEM55B-202ENST00000398020 TIMM13Q9Y5L4 95 aaPredicted RBP27.35■■□□□ 1.97
TMEM55B-202ENST00000398020 PHACTR2O75167 634 aa27.34■■□□□ 1.97
TMEM55B-202ENST00000398020 RPL17P18621 184 aaKnown RBP27.34■■□□□ 1.97
TMEM55B-202ENST00000398020 ERCC5P28715 1186 aaPredicted RBP27.34■■□□□ 1.97
TMEM55B-202ENST00000398020 GCLMP48507 274 aa27.34■■□□□ 1.97
TMEM55B-202ENST00000398020 AARSP49588 968 aaKnown RBP eCLIP27.34■■□□□ 1.97
TMEM55B-202ENST00000398020 TYRO3Q06418 890 aa27.34■■□□□ 1.97
TMEM55B-202ENST00000398020 PPP3CAQ08209 521 aa27.34■■□□□ 1.97
TMEM55B-202ENST00000398020 TCERG1LQ5VWI1 586 aa27.34■■□□□ 1.97
TMEM55B-202ENST00000398020 MAFAQ8NHW3 353 aaPredicted RBP27.34■■□□□ 1.97
TMEM55B-202ENST00000398020 ZNF560Q96MR9 790 aa27.34■■□□□ 1.97
TMEM55B-202ENST00000398020 IKBKBO14920 756 aa27.33■■□□□ 1.97
TMEM55B-202ENST00000398020 LILRB3O75022 631 aa27.33■■□□□ 1.97
TMEM55B-202ENST00000398020 C4BPAP04003 597 aaKnown RBP27.33■■□□□ 1.97
TMEM55B-202ENST00000398020 SENP8Q96LD8 212 aa27.33■■□□□ 1.97
TMEM55B-202ENST00000398020 TLE6Q9H808 572 aa27.33■■□□□ 1.97
TMEM55B-202ENST00000398020 IRAK3Q9Y616 596 aa27.33■■□□□ 1.97
TMEM55B-202ENST00000398020 SYCE3A1L190 88 aa27.33■■□□□ 1.97
TMEM55B-202ENST00000398020 KPNA7A9QM74 516 aa27.33■■□□□ 1.97
TMEM55B-202ENST00000398020 M0QZQ0 153 aa27.33■■□□□ 1.97
TMEM55B-202ENST00000398020 HYAL1Q12794 435 aa27.33■■□□□ 1.97
TMEM55B-202ENST00000398020 TPD52L1Q16890 204 aaPredicted RBP27.33■■□□□ 1.97
TMEM55B-202ENST00000398020 SV2CQ496J9 727 aa27.33■■□□□ 1.97
TMEM55B-202ENST00000398020 SV2AQ7L0J3 742 aa27.33■■□□□ 1.97
TMEM55B-202ENST00000398020 GLYCTKQ8IVS8 523 aa27.33■■□□□ 1.97
TMEM55B-202ENST00000398020 LRRC52Q8N7C0 313 aa27.33■■□□□ 1.97
TMEM55B-202ENST00000398020 HPDLQ96IR7 371 aa27.33■■□□□ 1.97
TMEM55B-202ENST00000398020 DNAJC25Q9H1X3 360 aa27.33■■□□□ 1.97
TMEM55B-202ENST00000398020 SPTBN5Q9NRC6 3674 aaKnown RBP27.33■■□□□ 1.96
TMEM55B-202ENST00000398020 CNPP09543 421 aaKnown RBP27.32■■□□□ 1.96
TMEM55B-202ENST00000398020 PNPLA4P41247 253 aa27.32■■□□□ 1.96
TMEM55B-202ENST00000398020 AP3M2P53677 418 aa27.32■■□□□ 1.96
TMEM55B-202ENST00000398020 TRPC3Q13507 836 aa27.32■■□□□ 1.96
TMEM55B-202ENST00000398020 FRMD5Q7Z6J6 570 aa27.32■■□□□ 1.96
TMEM55B-202ENST00000398020 LNX1Q8TBB1 728 aaPredicted RBP27.32■■□□□ 1.96
TMEM55B-202ENST00000398020 ELMO3Q96BJ8 720 aa27.32■■□□□ 1.96
TMEM55B-202ENST00000398020 PCDHB8Q9UN66 801 aa27.32■■□□□ 1.96
TMEM55B-202ENST00000398020 VNN1O95497 513 aa27.31■■□□□ 1.96
TMEM55B-202ENST00000398020 MYL6P60660 151 aa27.31■■□□□ 1.96
TMEM55B-202ENST00000398020 SKIV2LQ15477 1246 aaKnown RBP27.31■■□□□ 1.96
TMEM55B-202ENST00000398020 PSMD5Q16401 504 aa27.31■■□□□ 1.96
TMEM55B-202ENST00000398020 ZACNQ401N2 412 aa27.31■■□□□ 1.96
TMEM55B-202ENST00000398020 VARS2Q5ST30 1063 aaKnown RBP27.31■■□□□ 1.96
TMEM55B-202ENST00000398020 CREBRFQ8IUR6 639 aa27.31■■□□□ 1.96
TMEM55B-202ENST00000398020 PIK3R5Q8WYR1 880 aa27.31■■□□□ 1.96
TMEM55B-202ENST00000398020 PPP2R3CQ969Q6 453 aa27.31■■□□□ 1.96
TMEM55B-202ENST00000398020 SYN3O14994 580 aa27.3■■□□□ 1.96
TMEM55B-202ENST00000398020 RBM10P98175 930 aaKnown RBP27.3■■□□□ 1.96
TMEM55B-202ENST00000398020 MYO1EQ12965 1108 aa27.3■■□□□ 1.96
TMEM55B-202ENST00000398020 HSP90AA4PQ58FG1 418 aa27.3■■□□□ 1.96
TMEM55B-202ENST00000398020 KLHL5Q96PQ7 755 aa27.3■■□□□ 1.96
TMEM55B-202ENST00000398020 METTL14Q9HCE5 456 aaKnown RBP27.3■■□□□ 1.96
TMEM55B-202ENST00000398020 SSX2IPQ9Y2D8 614 aa27.3■■□□□ 1.96
TMEM55B-202ENST00000398020 CYB561D2O14569 222 aa27.3■■□□□ 1.96
TMEM55B-202ENST00000398020 TEX28O15482 410 aa27.3■■□□□ 1.96
TMEM55B-202ENST00000398020 CLSTN1O94985 981 aa27.3■■□□□ 1.96
TMEM55B-202ENST00000398020 FGFR1OPO95684 399 aaKnown RBP27.3■■□□□ 1.96
TMEM55B-202ENST00000398020 ENPEPQ07075 957 aa27.3■■□□□ 1.96
TMEM55B-202ENST00000398020 NCOA4Q13772 614 aa27.3■■□□□ 1.96
TMEM55B-202ENST00000398020 C15orf39Q6ZRI6 1047 aa27.3■■□□□ 1.96
TMEM55B-202ENST00000398020 SLC35C1Q96A29 364 aa27.3■■□□□ 1.96
TMEM55B-202ENST00000398020 EMILIN2Q9BXX0 1053 aa27.3■■□□□ 1.96
TMEM55B-202ENST00000398020 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.3■■□□□ 1.963e-6■■■■■ 94.9
TMEM55B-202ENST00000398020 SNX9Q9Y5X1 595 aa27.3■■□□□ 1.96
TMEM55B-202ENST00000398020 LINC01565O15544 149 aa27.29■■□□□ 1.96
TMEM55B-202ENST00000398020 ODC1P11926 461 aa27.29■■□□□ 1.96
TMEM55B-202ENST00000398020 MCCD1P59942 119 aaPredicted RBP27.29■■□□□ 1.96
TMEM55B-202ENST00000398020 DUSP6Q16828 381 aa27.29■■□□□ 1.96
TMEM55B-202ENST00000398020 CT47A1Q5JQC4 288 aaPredicted RBP27.29■■□□□ 1.96
TMEM55B-202ENST00000398020 LLGL2Q6P1M3 1020 aa27.29■■□□□ 1.96
TMEM55B-202ENST00000398020 RSPO2Q6UXX9 243 aaPredicted RBP27.29■■□□□ 1.96
TMEM55B-202ENST00000398020 IRF2BP1Q8IU81 584 aa27.29■■□□□ 1.96
TMEM55B-202ENST00000398020 APPL2Q8NEU8 664 aa27.29■■□□□ 1.96
TMEM55B-202ENST00000398020 CNOT6LQ96LI5 555 aaKnown RBP27.29■■□□□ 1.96
TMEM55B-202ENST00000398020 RXFP1Q9HBX9 757 aa27.29■■□□□ 1.96
TMEM55B-202ENST00000398020 CLASP2O75122 1294 aaKnown RBP27.28■■□□□ 1.96
TMEM55B-202ENST00000398020 LETM1O95202 739 aaPredicted RBP27.28■■□□□ 1.96
TMEM55B-202ENST00000398020 GNA14O95837 355 aa27.28■■□□□ 1.96
TMEM55B-202ENST00000398020 KLRC2P26717 231 aa27.28■■□□□ 1.96
TMEM55B-202ENST00000398020 ANO6Q4KMQ2 910 aa27.28■■□□□ 1.96
TMEM55B-202ENST00000398020 EP400NLQ6ZTU2 488 aa27.28■■□□□ 1.96
TMEM55B-202ENST00000398020 ANKS3Q6ZW76 656 aa27.28■■□□□ 1.96
TMEM55B-202ENST00000398020 TAS1R2Q8TE23 839 aa27.28■■□□□ 1.96
TMEM55B-202ENST00000398020 CLSTN3Q9BQT9 956 aa27.28■■□□□ 1.96
TMEM55B-202ENST00000398020 TMEM8AQ9HCN3 771 aa27.28■■□□□ 1.96
TMEM55B-202ENST00000398020 ADAM12O43184 909 aa27.27■■□□□ 1.96
TMEM55B-202ENST00000398020 PAX3P23760 479 aa27.27■■□□□ 1.96
TMEM55B-202ENST00000398020 PIK3CAP42336 1068 aa27.27■■□□□ 1.96
TMEM55B-202ENST00000398020 YWHAHQ04917 246 aaPredicted RBP27.27■■□□□ 1.96
TMEM55B-202ENST00000398020 ZSCAN23Q3MJ62 389 aa27.27■■□□□ 1.96
TMEM55B-202ENST00000398020 CBWD6Q4V339 395 aa27.27■■□□□ 1.96
TMEM55B-202ENST00000398020 CBWD3Q5JTY5 395 aa27.27■■□□□ 1.96
TMEM55B-202ENST00000398020 CBWD5Q5RIA9 395 aa27.27■■□□□ 1.96
TMEM55B-202ENST00000398020 XYLT2Q9H1B5 865 aa27.27■■□□□ 1.96
TMEM55B-202ENST00000398020 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.27■■□□□ 1.96
TMEM55B-202ENST00000398020 MTRRQ9UBK8 725 aa27.27■■□□□ 1.96
TMEM55B-202ENST00000398020 TSC2P49815 1807 aa27.27■■□□□ 1.96
TMEM55B-202ENST00000398020 STX10O60499 249 aa27.27■■□□□ 1.96
TMEM55B-202ENST00000398020 HLA-DRAP01903 254 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms