RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 TRIM14Q14142 442 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 PSMD6Q15008 389 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 SEZ6Q53EL9 994 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 ZBTB41Q5SVQ8 909 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 SLC27A1Q6PCB7 646 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 CRELD2Q6UXH1 353 aaPredicted RBP14.3□□□□□ -0.12
SEC13-209ENST00000397117 CCDC186Q7Z3E2 898 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 PARD3BQ8TEW8 1205 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 CASD1Q96PB1 797 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 NUP58Q9BVL2 599 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 TRIM6Q9C030 488 aaPredicted RBP14.3□□□□□ -0.12
SEC13-209ENST00000397117 IRF2BPLQ9H1B7 796 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 FAM86C1Q9NVL1 165 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 GTPBP10A4D1E9 387 aaKnown RBP14.29□□□□□ -0.12
SEC13-209ENST00000397117 HIDE1A8MVS5 230 aa14.29□□□□□ -0.12
SEC13-209ENST00000397117 FAM189A1O60320 539 aa14.29□□□□□ -0.12
SEC13-209ENST00000397117 CLTAP09496 248 aa14.29□□□□□ -0.12
SEC13-209ENST00000397117 SRGAP2BP0DMP2 458 aa14.29□□□□□ -0.12
SEC13-209ENST00000397117 HOXB8P17481 243 aaPredicted RBP14.29□□□□□ -0.12
SEC13-209ENST00000397117 TRIM21P19474 475 aaKnown RBP14.29□□□□□ -0.12
SEC13-209ENST00000397117 GTF2H1P32780 548 aa14.29□□□□□ -0.12
SEC13-209ENST00000397117 NUBP1P53384 320 aa14.29□□□□□ -0.12
SEC13-209ENST00000397117 MYL7Q01449 175 aa14.29□□□□□ -0.12
SEC13-209ENST00000397117 EXOC3L4Q17RC7 722 aa14.29□□□□□ -0.12
SEC13-209ENST00000397117 PLPP4Q5VZY2 271 aa14.29□□□□□ -0.12
SEC13-209ENST00000397117 GBP6Q6ZN66 633 aa14.29□□□□□ -0.12
SEC13-209ENST00000397117 CCDC51Q96ER9 411 aa14.29□□□□□ -0.12
SEC13-209ENST00000397117 RIPOR3Q96MK2 946 aa14.29□□□□□ -0.12
SEC13-209ENST00000397117 TCF25Q9BQ70 676 aa14.29□□□□□ -0.12
SEC13-209ENST00000397117 CRACR2AQ9BSW2 395 aa14.29□□□□□ -0.12
SEC13-209ENST00000397117 TMEM117Q9H0C3 514 aa14.29□□□□□ -0.12
SEC13-209ENST00000397117 RPF1Q9H9Y2 349 aaKnown RBP14.29□□□□□ -0.12
SEC13-209ENST00000397117 NGRNQ9NPE2 291 aaKnown RBP14.29□□□□□ -0.12
SEC13-209ENST00000397117 PUF60Q9UHX1 559 aaKnown RBP14.29□□□□□ -0.12
SEC13-209ENST00000397117 CPSF3Q9UKF6 684 aaKnown RBP14.29□□□□□ -0.12
SEC13-209ENST00000397117 LRRIQ3A6PVS8 624 aaPredicted RBP14.28□□□□□ -0.12
SEC13-209ENST00000397117 GFRA3O60609 400 aa14.28□□□□□ -0.12
SEC13-209ENST00000397117 NPTXRO95502 500 aa14.28□□□□□ -0.12
SEC13-209ENST00000397117 PDGFBP01127 241 aaPredicted RBP14.28□□□□□ -0.12
SEC13-209ENST00000397117 TNNI1P19237 187 aa14.28□□□□□ -0.12
SEC13-209ENST00000397117 TNFSF9P41273 254 aa14.28□□□□□ -0.12
SEC13-209ENST00000397117 GCLMP48507 274 aa14.28□□□□□ -0.12
SEC13-209ENST00000397117 MCCD1P59942 119 aaPredicted RBP14.28□□□□□ -0.12
SEC13-209ENST00000397117 SURF1Q15526 300 aa14.28□□□□□ -0.12
SEC13-209ENST00000397117 HS1BP3Q53T59 392 aa14.28□□□□□ -0.12
SEC13-209ENST00000397117 KCNT2Q6UVM3 1135 aa14.28□□□□□ -0.12
SEC13-209ENST00000397117 BRSK2Q8IWQ3 736 aa14.28□□□□□ -0.12
SEC13-209ENST00000397117 NEK11Q8NG66 645 aa14.28□□□□□ -0.12
SEC13-209ENST00000397117 PLEKHO2Q8TD55 490 aa14.28□□□□□ -0.12
SEC13-209ENST00000397117 CPLX3Q8WVH0 158 aa14.28□□□□□ -0.12
SEC13-209ENST00000397117 IQCDQ96DY2 449 aa14.28□□□□□ -0.12
SEC13-209ENST00000397117 FAM212AQ96EL1 285 aa14.28□□□□□ -0.12
SEC13-209ENST00000397117 APOL5Q9BWW9 433 aa14.28□□□□□ -0.12
SEC13-209ENST00000397117 PDE11AQ9HCR9 933 aa14.28□□□□□ -0.12
SEC13-209ENST00000397117 FAM207AQ9NSI2 230 aaPredicted RBP14.28□□□□□ -0.12
SEC13-209ENST00000397117 GCNT4Q9P109 453 aa14.28□□□□□ -0.12
SEC13-209ENST00000397117 SIK3Q9Y2K2 1263 aa14.28□□□□□ -0.12
SEC13-209ENST00000397117 FAM186AA6NE01 2351 aa14.28□□□□□ -0.12
SEC13-209ENST00000397117 P4HA2O15460 535 aa14.27□□□□□ -0.12
SEC13-209ENST00000397117 KLK7P49862 253 aa14.27□□□□□ -0.12
SEC13-209ENST00000397117 MXI1P50539 228 aa14.27□□□□□ -0.12
SEC13-209ENST00000397117 PPP3CAQ08209 521 aa14.27□□□□□ -0.12
SEC13-209ENST00000397117 TBX2Q13207 712 aaPredicted RBP14.27□□□□□ -0.12
SEC13-209ENST00000397117 CBWD6Q4V339 395 aa14.27□□□□□ -0.12
SEC13-209ENST00000397117 CBWD3Q5JTY5 395 aa14.27□□□□□ -0.12
SEC13-209ENST00000397117 CBWD5Q5RIA9 395 aa14.27□□□□□ -0.12
SEC13-209ENST00000397117 C1orf220Q5T0J3 134 aa14.27□□□□□ -0.12
SEC13-209ENST00000397117 TWF2Q6IBS0 349 aaKnown RBP14.27□□□□□ -0.12
SEC13-209ENST00000397117 LLGL2Q6P1M3 1020 aa14.27□□□□□ -0.12
SEC13-209ENST00000397117 CCDC150Q8NCX0 1101 aa14.27□□□□□ -0.12
SEC13-209ENST00000397117 ATOH1Q92858 354 aaPredicted RBP14.27□□□□□ -0.12
SEC13-209ENST00000397117 ACAP3Q96P50 834 aa14.27□□□□□ -0.12
SEC13-209ENST00000397117 CCDC94Q9BW85 323 aaPredicted RBP14.27□□□□□ -0.12
SEC13-209ENST00000397117 LSM14BQ9BX40 385 aaKnown RBP14.27□□□□□ -0.12
SEC13-209ENST00000397117 TMEM8AQ9HCN3 771 aa14.27□□□□□ -0.12
SEC13-209ENST00000397117 ENTPD7Q9NQZ7 604 aa14.27□□□□□ -0.12
SEC13-209ENST00000397117 CHST12Q9NRB3 414 aa14.27□□□□□ -0.12
SEC13-209ENST00000397117 CFAP54Q96N23 3096 aa14.27□□□□□ -0.13
SEC13-209ENST00000397117 AKR1B15C9JRZ8 316 aaPredicted RBP14.26□□□□□ -0.13
SEC13-209ENST00000397117 PROB1E7EW31 1015 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 IL18RAPO95256 599 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 ZSCAN20P17040 1043 aaPredicted RBP14.26□□□□□ -0.13
SEC13-209ENST00000397117 POU5F1Q01860 360 aaKnown RBP14.26□□□□□ -0.13
SEC13-209ENST00000397117 KCNMA1Q12791 1236 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 ENOX2Q16206 610 aaKnown RBP14.26□□□□□ -0.13
SEC13-209ENST00000397117 KRT39Q6A163 491 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 CNGA4Q8IV77 575 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 CEP120Q8N960 986 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 KREMEN2Q8NCW0 462 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 ZNF397Q8NF99 534 aaPredicted RBP14.26□□□□□ -0.13
SEC13-209ENST00000397117 ZNF558Q96NG5 402 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 CGRRF1Q99675 332 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 EIF2AQ9BY44 585 aaKnown RBP14.26□□□□□ -0.13
SEC13-209ENST00000397117 SPG21Q9NZD8 308 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 CDH22Q9UJ99 828 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 H0Y858 1186 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 PMM2O15305 246 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 HOXA2O43364 376 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 GALR2O43603 387 aaPredicted RBP14.26□□□□□ -0.13
SEC13-209ENST00000397117 GYPCP04921 128 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms