RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 XRCC6P12956 609 aaKnown RBP eCLIP14.91□□□□□ -0.02
SEC13-205ENST00000397101 GLRA2P23416 452 aa14.91□□□□□ -0.02
SEC13-205ENST00000397101 CCR3P51677 355 aa14.91□□□□□ -0.02
SEC13-205ENST00000397101 GPBP1Q86WP2 473 aa14.91□□□□□ -0.02
SEC13-205ENST00000397101 CEP57Q86XR8 500 aa14.91□□□□□ -0.02
SEC13-205ENST00000397101 DDX1Q92499 740 aaKnown RBP14.91□□□□□ -0.02
SEC13-205ENST00000397101 RABGGTAQ92696 567 aa14.91□□□□□ -0.02
SEC13-205ENST00000397101 CCDC47Q96A33 483 aaKnown RBP14.91□□□□□ -0.02
SEC13-205ENST00000397101 GZF1Q9H116 711 aaPredicted RBP14.91□□□□□ -0.02
SEC13-205ENST00000397101 HEBP1Q9NRV9 189 aa14.91□□□□□ -0.02
SEC13-205ENST00000397101 BLOC1S4Q9NUP1 217 aa14.91□□□□□ -0.02
SEC13-205ENST00000397101 TMEM63CQ9P1W3 806 aa14.91□□□□□ -0.02
SEC13-205ENST00000397101 NOTCH4Q99466 2003 aa14.91□□□□□ -0.02
SEC13-205ENST00000397101 ARHGEF37A1IGU5 675 aa14.9□□□□□ -0.02
SEC13-205ENST00000397101 B4GALT5O43286 388 aa14.9□□□□□ -0.02
SEC13-205ENST00000397101 LETM1O95202 739 aaPredicted RBP14.9□□□□□ -0.02
SEC13-205ENST00000397101 SMC2O95347 1197 aa14.9□□□□□ -0.02
SEC13-205ENST00000397101 RHOP08100 348 aa14.9□□□□□ -0.02
SEC13-205ENST00000397101 MLLT6P55198 1093 aaPredicted RBP14.9□□□□□ -0.02
SEC13-205ENST00000397101 PNOCQ13519 176 aa14.9□□□□□ -0.02
SEC13-205ENST00000397101 POSTNQ15063 836 aa14.9□□□□□ -0.02
SEC13-205ENST00000397101 CDCA2Q69YH5 1023 aaPredicted RBP14.9□□□□□ -0.02
SEC13-205ENST00000397101 DYMQ7RTS9 669 aa14.9□□□□□ -0.02
SEC13-205ENST00000397101 SYT2Q8N9I0 419 aaPredicted RBP14.9□□□□□ -0.02
SEC13-205ENST00000397101 HASPINQ8TF76 798 aa14.9□□□□□ -0.02
SEC13-205ENST00000397101 PLA2G2FQ9BZM2 168 aa14.9□□□□□ -0.02
SEC13-205ENST00000397101 BLZF1Q9H2G9 400 aa14.9□□□□□ -0.02
SEC13-205ENST00000397101 FZD8Q9H461 694 aa14.9□□□□□ -0.02
SEC13-205ENST00000397101 ZHX3Q9H4I2 956 aa14.9□□□□□ -0.02
SEC13-205ENST00000397101 HCFC1R1Q9NWW0 138 aa14.9□□□□□ -0.02
SEC13-205ENST00000397101 ARID2Q68CP9 1835 aa14.89□□□□□ -0.03
SEC13-205ENST00000397101 N4BP3O15049 544 aa14.89□□□□□ -0.03
SEC13-205ENST00000397101 USO1O60763 962 aaKnown RBP14.89□□□□□ -0.03
SEC13-205ENST00000397101 PRR29P0C7W0 189 aa14.89□□□□□ -0.03
SEC13-205ENST00000397101 IDEP14735 1019 aa14.89□□□□□ -0.03
SEC13-205ENST00000397101 CNR2P34972 360 aa14.89□□□□□ -0.03
SEC13-205ENST00000397101 OR1D2P34982 312 aa14.89□□□□□ -0.03
SEC13-205ENST00000397101 RARRES1P49788 294 aa14.89□□□□□ -0.03
SEC13-205ENST00000397101 ASIC1P78348 528 aa14.89□□□□□ -0.03
SEC13-205ENST00000397101 RAD51AP2Q09MP3 1159 aa14.89□□□□□ -0.03
SEC13-205ENST00000397101 CSRP2Q16527 193 aa14.89□□□□□ -0.03
SEC13-205ENST00000397101 PPM1JQ5JR12 505 aa14.89□□□□□ -0.03
SEC13-205ENST00000397101 TANGO2Q6ICL3 276 aa14.89□□□□□ -0.03
SEC13-205ENST00000397101 C1orf228Q6PIY5 440 aa14.89□□□□□ -0.03
SEC13-205ENST00000397101 PADI6Q6TGC4 694 aa14.89□□□□□ -0.03
SEC13-205ENST00000397101 ANKS3Q6ZW76 656 aa14.89□□□□□ -0.03
SEC13-205ENST00000397101 CDR2LQ86X02 465 aaPredicted RBP14.89□□□□□ -0.03
SEC13-205ENST00000397101 LRRC15Q8TF66 581 aa14.89□□□□□ -0.03
SEC13-205ENST00000397101 ERCC4Q92889 916 aaPredicted RBP14.89□□□□□ -0.03
SEC13-205ENST00000397101 IRF7Q92985 503 aa14.89□□□□□ -0.03
SEC13-205ENST00000397101 SMARCE1Q969G3 411 aa14.89□□□□□ -0.03
SEC13-205ENST00000397101 MCRS1Q96EZ8 462 aa14.89□□□□□ -0.03
SEC13-205ENST00000397101 CACNG4Q9UBN1 327 aa14.89□□□□□ -0.03
SEC13-205ENST00000397101 ASPMQ8IZT6 3477 aa14.89□□□□□ -0.03
SEC13-205ENST00000397101 F5P12259 2224 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 MYMKA6NI61 221 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 PAPSS2O95340 614 aaPredicted RBP14.88□□□□□ -0.03
SEC13-205ENST00000397101 PTPN2P17706 415 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 FCARP24071 287 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 CASP1P29466 404 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 SLC12A3P55017 1021 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 SPEM2Q0P670 501 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 CUL4BQ13620 913 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 SLC5A9Q2M3M2 681 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 PRSS36Q5K4E3 855 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 SLC8B1Q6J4K2 584 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 POTEHQ6S545 545 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 MAEAQ7L5Y9 396 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 MAP4K3Q8IVH8 894 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 ELOA2Q8IYF1 753 aaPredicted RBP14.88□□□□□ -0.03
SEC13-205ENST00000397101 DDX12PQ92771 950 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 MSANTD3Q96H12 275 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 ANP32EQ9BTT0 268 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 C2orf40Q9H1Z8 148 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 BRD9Q9H8M2 597 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 ZFP14Q9HCL3 533 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 SEMA4GQ9NTN9 838 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 KBTBD4Q9NVX7 518 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 SNTG2Q9NY99 539 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 CDY1Q9Y6F8 540 aa14.88□□□□□ -0.03
SEC13-205ENST00000397101 MAP1BP46821 2468 aaKnown RBP14.88□□□□□ -0.03
SEC13-205ENST00000397101 NPHP3-ACAD11A0A0J9YXS1 232 aa14.87□□□□□ -0.03
SEC13-205ENST00000397101 ZNF197O14709 1029 aa14.87□□□□□ -0.03
SEC13-205ENST00000397101 TRAPPC3O43617 180 aa14.87□□□□□ -0.03
SEC13-205ENST00000397101 TBCAO75347 108 aaKnown RBP14.87□□□□□ -0.03
SEC13-205ENST00000397101 RECQL4O94761 1208 aa14.87□□□□□ -0.03
SEC13-205ENST00000397101 MYL1P05976 194 aa14.87□□□□□ -0.03
SEC13-205ENST00000397101 CYP11B2P19099 503 aa14.87□□□□□ -0.03
SEC13-205ENST00000397101 CACNB1Q02641 598 aaPredicted RBP14.87□□□□□ -0.03
SEC13-205ENST00000397101 RINT1Q6NUQ1 792 aa14.87□□□□□ -0.03
SEC13-205ENST00000397101 SASS6Q6UVJ0 657 aa14.87□□□□□ -0.03
SEC13-205ENST00000397101 PRR23CQ6ZRP0 262 aa14.87□□□□□ -0.03
SEC13-205ENST00000397101 ZBTB8OSQ8IWT0 167 aa14.87□□□□□ -0.03
SEC13-205ENST00000397101 MCPH1Q8NEM0 835 aa14.87□□□□□ -0.03
SEC13-205ENST00000397101 ZNF461Q8TAF7 563 aa14.87□□□□□ -0.03
SEC13-205ENST00000397101 DEPDC1BQ8WUY9 529 aa14.87□□□□□ -0.03
SEC13-205ENST00000397101 ING5Q8WYH8 240 aa14.87□□□□□ -0.03
SEC13-205ENST00000397101 FAM3CQ92520 227 aa14.87□□□□□ -0.03
SEC13-205ENST00000397101 UROC1Q96N76 676 aa14.87□□□□□ -0.03
SEC13-205ENST00000397101 ASB16Q96NS5 453 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms