RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 REXO2Q9Y3B8 237 aaKnown RBP14.58□□□□□ -0.08
MCF2L-209ENST00000397036 ZNF263O14978 683 aa14.57□□□□□ -0.08
MCF2L-209ENST00000397036 KIAA0355O15063 1070 aa14.57□□□□□ -0.08
MCF2L-209ENST00000397036 CYP26A1O43174 497 aa14.57□□□□□ -0.08
MCF2L-209ENST00000397036 WDR72Q3MJ13 1102 aa14.57□□□□□ -0.08
MCF2L-209ENST00000397036 LIMS2Q7Z4I7 341 aa14.57□□□□□ -0.08
MCF2L-209ENST00000397036 OLIG1Q8TAK6 271 aa14.57□□□□□ -0.08
MCF2L-209ENST00000397036 EPS8L1Q8TE68 723 aa14.57□□□□□ -0.08
MCF2L-209ENST00000397036 LINC01599Q8WXQ3 324 aa14.57□□□□□ -0.08
MCF2L-209ENST00000397036 C18orf25Q96B23 403 aaPredicted RBP14.57□□□□□ -0.08
MCF2L-209ENST00000397036 DDX27Q96GQ7 796 aaKnown RBP14.57□□□□□ -0.08
MCF2L-209ENST00000397036 PPP1R13BQ96KQ4 1090 aa14.57□□□□□ -0.08
MCF2L-209ENST00000397036 ZNF560Q96MR9 790 aa14.57□□□□□ -0.08
MCF2L-209ENST00000397036 WNT8AQ9H1J5 351 aa14.57□□□□□ -0.08
MCF2L-209ENST00000397036 CISHQ9NSE2 258 aa14.57□□□□□ -0.08
MCF2L-209ENST00000397036 TMEM39AQ9NV64 488 aa14.57□□□□□ -0.08
MCF2L-209ENST00000397036 TMEM161AQ9NX61 479 aa14.57□□□□□ -0.08
MCF2L-209ENST00000397036 KANSL3Q9P2N6 904 aa14.57□□□□□ -0.08
MCF2L-209ENST00000397036 ADAMTS1Q9UHI8 967 aa14.57□□□□□ -0.08
MCF2L-209ENST00000397036 INTUQ9ULD6 942 aa14.57□□□□□ -0.08
MCF2L-209ENST00000397036 RALGAPA2Q2PPJ7 1873 aa14.57□□□□□ -0.08
MCF2L-209ENST00000397036 UMODL1Q5DID0 1318 aa14.57□□□□□ -0.08
MCF2L-209ENST00000397036 A0A087X0T9 212 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 MEIS3P2A8K0S8 358 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 DDX3XO00571 662 aaKnown RBP eCLIP14.56□□□□□ -0.08
MCF2L-209ENST00000397036 FAM228BP0C875 321 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 PNMA6AP0CW24 399 aaPredicted RBP14.56□□□□□ -0.08
MCF2L-209ENST00000397036 GZMAP12544 262 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 CYP11B1P15538 503 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 LRRC26Q2I0M4 334 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 DPH6Q7L8W6 267 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 DDX1Q92499 740 aaKnown RBP14.56□□□□□ -0.08
MCF2L-209ENST00000397036 ZFP42Q96MM3 310 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 ARID3AQ99856 593 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 AGPAT1Q99943 283 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 MIOSQ9NXC5 875 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 TUBGCP4Q9UGJ1 667 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 NOCTQ9UK39 431 aaKnown RBP14.56□□□□□ -0.08
MCF2L-209ENST00000397036 ATP11BQ9Y2G3 1177 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 PCDHB4Q9Y5E5 795 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 DNAH12Q6ZR08 3092 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 KIF2AO00139 706 aaPredicted RBP14.56□□□□□ -0.08
MCF2L-209ENST00000397036 PJA2O43164 708 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 PAEPP09466 180 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 TNFAIP3P21580 790 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 MLH1P40692 756 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 USP8P40818 1118 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 PDE6CP51160 858 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 GUCY2FP51841 1108 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 VAV2P52735 878 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 CDR2Q01850 454 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 SOX4Q06945 474 aaPredicted RBP14.56□□□□□ -0.08
MCF2L-209ENST00000397036 INCA1Q0VD86 236 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 GRIK3Q13003 919 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 GLRA4Q5JXX5 417 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 ALKBH5Q6P6C2 394 aaKnown RBP14.56□□□□□ -0.08
MCF2L-209ENST00000397036 NYAP1Q6ZVC0 841 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 CRIPAKQ8N1N5 446 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 ACRBPQ8NEB7 543 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 LPPQ93052 612 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 UROC1Q96N76 676 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 DESI2Q9BSY9 194 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.56□□□□□ -0.08
MCF2L-209ENST00000397036 TRMT1Q9NXH9 659 aaKnown RBP14.56□□□□□ -0.08
MCF2L-209ENST00000397036 NXF1Q9UBU9 619 aaKnown RBP14.56□□□□□ -0.08
MCF2L-209ENST00000397036 NAGPAQ9UK23 515 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 PCDHA13Q9Y5I0 950 aa14.56□□□□□ -0.08
MCF2L-209ENST00000397036 USP27XA6NNY8 438 aa14.55□□□□□ -0.08
MCF2L-209ENST00000397036 TACC1O75410 805 aa14.55□□□□□ -0.08
MCF2L-209ENST00000397036 TIMP1P01033 207 aa14.55□□□□□ -0.08
MCF2L-209ENST00000397036 KRT5P13647 590 aa14.55□□□□□ -0.08
MCF2L-209ENST00000397036 CYP2C18P33260 490 aa14.55□□□□□ -0.08
MCF2L-209ENST00000397036 MAGEA1P43355 309 aa14.55□□□□□ -0.08
MCF2L-209ENST00000397036 TAF6P49848 677 aa14.55□□□□□ -0.08
MCF2L-209ENST00000397036 TNNC1P63316 161 aa14.55□□□□□ -0.08
MCF2L-209ENST00000397036 GFPT1Q06210 699 aaPredicted RBP14.55□□□□□ -0.08
MCF2L-209ENST00000397036 SV2CQ496J9 727 aa14.55□□□□□ -0.08
MCF2L-209ENST00000397036 TMEM270Q6UE05 265 aa14.55□□□□□ -0.08
MCF2L-209ENST00000397036 GLB1LQ6UWU2 654 aa14.55□□□□□ -0.08
MCF2L-209ENST00000397036 NOP9Q86U38 636 aaKnown RBP14.55□□□□□ -0.08
MCF2L-209ENST00000397036 SLC47A2Q86VL8 602 aa14.55□□□□□ -0.08
MCF2L-209ENST00000397036 C17orf53Q8N3J3 647 aaPredicted RBP14.55□□□□□ -0.08
MCF2L-209ENST00000397036 RBBP8NLQ8NC74 664 aaPredicted RBP14.55□□□□□ -0.08
MCF2L-209ENST00000397036 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.55□□□□□ -0.08
MCF2L-209ENST00000397036 TSGA10Q9BZW7 698 aa14.55□□□□□ -0.08
MCF2L-209ENST00000397036 KIAA1257Q9ULG3 409 aa14.55□□□□□ -0.08
MCF2L-209ENST00000397036 BARX2Q9UMQ3 279 aaPredicted RBP14.55□□□□□ -0.08
MCF2L-209ENST00000397036 TRIP11Q15643 1979 aa14.54□□□□□ -0.08
MCF2L-209ENST00000397036 BTNL10A8MVZ5 291 aa14.54□□□□□ -0.08
MCF2L-209ENST00000397036 KPNA7A9QM74 516 aa14.54□□□□□ -0.08
MCF2L-209ENST00000397036 HOXA2O43364 376 aa14.54□□□□□ -0.08
MCF2L-209ENST00000397036 CILPO75339 1184 aa14.54□□□□□ -0.08
MCF2L-209ENST00000397036 WEE2P0C1S8 567 aa14.54□□□□□ -0.08
MCF2L-209ENST00000397036 CHRNB2P17787 502 aa14.54□□□□□ -0.08
MCF2L-209ENST00000397036 CCL23P55773 120 aa14.54□□□□□ -0.08
MCF2L-209ENST00000397036 LILRA4P59901 499 aa14.54□□□□□ -0.08
MCF2L-209ENST00000397036 CYP27A1Q02318 531 aa14.54□□□□□ -0.08
MCF2L-209ENST00000397036 TUSC3Q13454 348 aa14.54□□□□□ -0.08
MCF2L-209ENST00000397036 PPP1R2P3Q6NXS1 205 aa14.54□□□□□ -0.08
MCF2L-209ENST00000397036 CNKSR3Q6P9H4 555 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms