RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 CCDC170Q8IYT3 715 aa15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 FBXL13Q8NEE6 735 aa15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 LMO3Q8TAP4 145 aa15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 FAM84AQ96KN4 292 aa15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 GAD1Q99259 594 aa15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 EDEM3Q9BZQ6 932 aa15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 RNF216Q9NWF9 866 aaPredicted RBP15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 L1RE1Q9UN81 338 aa15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 ARL5CA6NH57 179 aa15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 TULP1O00294 542 aaPredicted RBP15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 CDK17Q00537 523 aa15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 FPGSQ05932 587 aa15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 TAS1R2Q8TE23 839 aa15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 BADQ92934 168 aa15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 PCMTD1Q96MG8 357 aaPredicted RBP15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 ZFP42Q96MM3 310 aa15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 PPP1R10Q96QC0 940 aaKnown RBP15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 RPS6KC1Q96S38 1066 aa15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 CRACR2AQ9BSW2 395 aa15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 UBQLN1Q9UMX0 589 aaKnown RBP15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 ERICH4A6NGS2 130 aa15.92■□□□□ 0.14
TM9SF1-202ENST00000396854 EIF3CLB5ME19 914 aaKnown RBP15.92■□□□□ 0.14
TM9SF1-202ENST00000396854 XPOTO43592 962 aaKnown RBP15.92■□□□□ 0.14
TM9SF1-202ENST00000396854 BAIAP3O94812 1187 aa15.92■□□□□ 0.14
TM9SF1-202ENST00000396854 VNN1O95497 513 aa15.92■□□□□ 0.14
TM9SF1-202ENST00000396854 PON1P27169 355 aa15.92■□□□□ 0.14
TM9SF1-202ENST00000396854 BIRC3Q13489 604 aa15.92■□□□□ 0.14
TM9SF1-202ENST00000396854 GLRA4Q5JXX5 417 aa15.92■□□□□ 0.14
TM9SF1-202ENST00000396854 CCDC122Q5T0U0 273 aa15.92■□□□□ 0.14
TM9SF1-202ENST00000396854 PAPD7Q5XG87 772 aaKnown RBP15.92■□□□□ 0.14
TM9SF1-202ENST00000396854 DPY19L2P1Q6NXN4 242 aa15.92■□□□□ 0.14
TM9SF1-202ENST00000396854 WDR93Q6P2C0 686 aa15.92■□□□□ 0.14
TM9SF1-202ENST00000396854 C1orf127Q8N9H9 656 aa15.92■□□□□ 0.14
TM9SF1-202ENST00000396854 RNF169Q8NCN4 708 aa15.92■□□□□ 0.14
TM9SF1-202ENST00000396854 EIF3CQ99613 913 aaKnown RBP15.92■□□□□ 0.14
TM9SF1-202ENST00000396854 ABCB6Q9NP58 842 aa15.92■□□□□ 0.14
TM9SF1-202ENST00000396854 PLCB1Q9NQ66 1216 aa15.92■□□□□ 0.14
TM9SF1-202ENST00000396854 RNF19AQ9NV58 838 aa15.92■□□□□ 0.14
TM9SF1-202ENST00000396854 ZNHIT6Q9NWK9 470 aaKnown RBP15.92■□□□□ 0.14
TM9SF1-202ENST00000396854 RAB20Q9NX57 234 aa15.92■□□□□ 0.14
TM9SF1-202ENST00000396854 H3BQF6 201 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 RHOXF2BP0C7M4 288 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 SLC9A1P19634 815 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 CYP3A5P20815 502 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 VSNL1P62760 191 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 NPAS4Q8IUM7 802 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 NOA1Q8NC60 698 aaKnown RBP15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 BEST2Q8NFU1 509 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 CXorf38Q8TB03 319 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 SEMA4DQ92854 862 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 RHOXF2Q9BQY4 288 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 ITGA11Q9UKX5 1188 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 PCDHB7Q9Y5E2 793 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 SCN1AP35498 2009 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 KRT86O43790 486 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 HLA-DRAP01903 254 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 ACTN1P12814 892 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 PIK3CAP42336 1068 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 GPS2Q13227 327 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 NAB2Q15742 525 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 CLLU1OSQ5K130 101 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 GLB1LQ6UWU2 654 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 KIAA1328Q86T90 577 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 TXLNBQ8N3L3 684 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 NEK11Q8NG66 645 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 RSPH1Q8WYR4 309 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 JAKMIP2Q96AA8 810 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 LSM14BQ9BX40 385 aaKnown RBP15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 INTS2Q9H0H0 1204 aaKnown RBP15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 NHEJ1Q9H9Q4 299 aaPredicted RBP15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 SIX2Q9NPC8 291 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 SLC38A7Q9NVC3 462 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 MIOSQ9NXC5 875 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 DPP3Q9NY33 737 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 CALCOCO1Q9P1Z2 691 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 SIX4Q9UIU6 781 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 PLAGL2Q9UPG8 496 aa15.91■□□□□ 0.14
TM9SF1-202ENST00000396854 COL4A6Q14031 1691 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 HOXA2O43364 376 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 ZC3H11AO75152 810 aaKnown RBP eCLIP15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 PHACTR2O75167 634 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 THP07101 528 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 ACRP10323 421 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 HNRNPH3P31942 346 aaKnown RBP15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 SCNN1GP51170 649 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 AFF1P51825 1210 aaKnown RBP15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 GRIK3Q13003 919 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 NCOA4Q13772 614 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 C16orf59Q7L2K0 433 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 DPF3Q92784 378 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 PSD3Q9NYI0 1048 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 PCDH10Q9P2E7 1040 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 TUBGCP4Q9UGJ1 667 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 FBXL5Q9UKA1 691 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 LRFN2Q9ULH4 789 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 SAR1BQ9Y6B6 198 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 EPHB6O15197 1021 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 LRRN2O75325 713 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms