RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 SMAPO00193 183 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 PIK3R1P27986 724 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 PRIM2P49643 509 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 BCAP31P51572 246 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 ZNF568Q3ZCX4 644 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 TWF2Q6IBS0 349 aaKnown RBP10.79□□□□□ -0.68
COL4A4-201ENST00000396625 CLASP1Q7Z460 1538 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 PFASO15067 1338 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 ZBTB39O15060 712 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 NDUFS3O75489 264 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 FTLP02792 175 aaPredicted RBP10.79□□□□□ -0.68
COL4A4-201ENST00000396625 ADORA2BP29275 332 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 PEX3P56589 373 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 RAD51Q06609 339 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 ADRM1Q16186 407 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 PHKG1Q16816 387 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 TRIM65Q6PJ69 517 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 MIER2Q8N344 545 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 LCORLQ8N3X6 602 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 WDR36Q8NI36 951 aaKnown RBP10.79□□□□□ -0.68
COL4A4-201ENST00000396625 ATP8B4Q8TF62 1192 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 TOPORSQ9NS56 1045 aaPredicted RBP10.79□□□□□ -0.68
COL4A4-201ENST00000396625 PPP1R37O75864 691 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 HSD17B4P51659 736 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 UGP2Q16851 508 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 ARL6IP4Q66PJ3 421 aaKnown RBP10.79□□□□□ -0.68
COL4A4-201ENST00000396625 DDX53Q86TM3 631 aaKnown RBP10.79□□□□□ -0.68
COL4A4-201ENST00000396625 EYA1Q99502 592 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 APOL5Q9BWW9 433 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 KDM5CP41229 1560 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 ATP9BO43861 1147 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 SLC16A2P36021 539 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 CATSPER4Q7RTX7 472 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 CATSPER2Q96P56 530 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 SIK2Q9H0K1 926 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 TUFT1Q9NNX1 390 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 A2MP01023 1474 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 CCT8L1PA6NM43 557 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 KRT20P35900 424 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 PHKA1P46020 1223 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 SARSP49591 514 aaKnown RBP10.79□□□□□ -0.68
COL4A4-201ENST00000396625 BYSLQ13895 437 aaKnown RBP10.79□□□□□ -0.68
COL4A4-201ENST00000396625 ARID5BQ14865 1188 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 GSTM1P09488 218 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 ATP6V1C1P21283 382 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 LRIG3Q6UXM1 1119 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 NSUN7Q8NE18 718 aaKnown RBP10.78□□□□□ -0.68
COL4A4-201ENST00000396625 TUBGCP4Q9UGJ1 667 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 DAPK2Q9UIK4 370 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 MLH3Q9UHC1 1453 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 PNMA6FA0A0J9YX94 578 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 ACTR2P61160 394 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 LINC00301Q8NCQ3 95 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 MOSPD2Q8NHP6 518 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 RNFT2Q96EX2 444 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 TRIM51Q9BSJ1 452 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 PPCSQ9HAB8 311 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 KLHL11Q9NVR0 708 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 H7C0S8 307 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 AKAP5P24588 427 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 GPR1P46091 355 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 SESN2P58004 480 aaPredicted RBP10.78□□□□□ -0.68
COL4A4-201ENST00000396625 ZNF200P98182 395 aaPredicted RBP10.78□□□□□ -0.68
COL4A4-201ENST00000396625 KYNUQ16719 465 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 EEPD1Q7L9B9 569 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 PIGSQ96S52 555 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 NOL6Q9H6R4 1146 aaKnown RBP10.78□□□□□ -0.68
COL4A4-201ENST00000396625 SLC40A1Q9NP59 571 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 VTA1Q9NP79 307 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 ATAD3AQ9NVI7 634 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 PCDHB6Q9Y5E3 794 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 H2AFYO75367 372 aaKnown RBP10.78□□□□□ -0.68
COL4A4-201ENST00000396625 SMNDC1O75940 238 aaKnown RBP eCLIP10.78□□□□□ -0.68
COL4A4-201ENST00000396625 LCP1P13796 627 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 GALNTL6Q49A17 601 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 CENPLQ8N0S6 344 aaPredicted RBP10.78□□□□□ -0.68
COL4A4-201ENST00000396625 BEST2Q8NFU1 509 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 UBXN6Q9BZV1 441 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 MANSC1Q9H8J5 431 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 MAN1C1Q9NR34 630 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 GALNT8Q9NY28 637 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 CTNNAL1Q9UBT7 734 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 TRPC5OSA6NMA1 111 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 ZBTB22O15209 634 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 CLPTM1O96005 669 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 TSNQ15631 228 aaKnown RBP10.78□□□□□ -0.68
COL4A4-201ENST00000396625 OASLQ15646 514 aaKnown RBP10.78□□□□□ -0.68
COL4A4-201ENST00000396625 SPANXN2Q5MJ10 180 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 UNC13DQ70J99 1090 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 SHCBP1Q8NEM2 672 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 CDCA7Q9BWT1 371 aaPredicted RBP10.78□□□□□ -0.68
COL4A4-201ENST00000396625 SH3GLB2Q9NR46 395 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 CDH16O75309 829 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 DARSP14868 501 aaKnown RBP10.78□□□□□ -0.68
COL4A4-201ENST00000396625 MAGEA10P43363 369 aaPredicted RBP10.78□□□□□ -0.68
COL4A4-201ENST00000396625 RPS8P62241 208 aaKnown RBP10.78□□□□□ -0.68
COL4A4-201ENST00000396625 XXYLT1Q8NBI6 393 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 ZNF496Q96IT1 587 aaPredicted RBP10.78□□□□□ -0.68
COL4A4-201ENST00000396625 RBM15Q96T37 977 aaKnown RBP eCLIP10.78□□□□□ -0.68
COL4A4-201ENST00000396625 CARD14Q9BXL6 1004 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms