RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 HDAC6Q9UBN7 1215 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 FAF1Q9UNN5 650 aaPredicted RBP16.41■□□□□ 0.22
GNE-202ENST00000396594 ESRRBO95718 433 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 MCF2P10911 925 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 MAP4P27816 1152 aaKnown RBP16.41■□□□□ 0.22
GNE-202ENST00000396594 HADHAP40939 763 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 HARS2P49590 506 aaKnown RBP16.41■□□□□ 0.22
GNE-202ENST00000396594 ARSEP51690 589 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 TMEM132BQ14DG7 1078 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 WDR49Q8IV35 697 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 SPATA4Q8NEY3 305 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 RIOX1Q9H6W3 641 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 KCNQ5Q9NR82 932 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 ANP32DO95626 131 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 INHBEP58166 350 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 TRIP13Q15645 432 aaPredicted RBP16.41■□□□□ 0.22
GNE-202ENST00000396594 EFCAB12Q6NXP0 572 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 POTEAQ6S8J7 498 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 VPS11Q9H270 941 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 NMRK1Q9NWW6 199 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 PPARGC1AQ9UBK2 798 aaKnown RBP16.41■□□□□ 0.22
GNE-202ENST00000396594 CYP26A1O43174 497 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 ITGA9Q13797 1035 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 KLHDC7AQ5VTJ3 777 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 FEZF2Q8TBJ5 459 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 SPIRE2Q8WWL2 714 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 N4BP2L2Q92802 583 aaPredicted RBP16.41■□□□□ 0.22
GNE-202ENST00000396594 GFM2Q969S9 779 aaKnown RBP16.41■□□□□ 0.22
GNE-202ENST00000396594 TTC17Q96AE7 1141 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 IDI2Q9BXS1 227 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 EIF3HO15372 352 aaKnown RBP eCLIP16.4■□□□□ 0.22
GNE-202ENST00000396594 CABYRO75952 493 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 BRAFP15056 766 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 ALDH1A3P47895 512 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 TTLL9Q3SXZ7 439 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 ZNF394Q53GI3 561 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 RABGAP1LQ5R372 815 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 CHCHD3Q9NX63 227 aaKnown RBP16.4■□□□□ 0.22
GNE-202ENST00000396594 SH3BP1Q9Y3L3 701 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 BCL9O00512 1426 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 SLIT3O75094 1523 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 GYS1P13807 737 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 SLC11A2P49281 568 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 ANXA11P50995 505 aaKnown RBP16.4■□□□□ 0.22
GNE-202ENST00000396594 ZKSCAN8Q15776 578 aaPredicted RBP16.4■□□□□ 0.22
GNE-202ENST00000396594 PPM1NQ8N819 430 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 SNX9Q9Y5X1 595 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 MYPNQ86TC9 1320 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 COL3A1P02461 1466 aaPredicted RBP16.4■□□□□ 0.22
GNE-202ENST00000396594 KLHL2O95198 593 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 TMCO4Q5TGY1 634 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 ZNF410Q86VK4 478 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 PASD1Q8IV76 773 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 REM2Q8IYK8 340 aaPredicted RBP16.4■□□□□ 0.22
GNE-202ENST00000396594 EEF2KMTQ96G04 330 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 PLEKHA4Q9H4M7 779 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 SLC30A1Q9Y6M5 507 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 POLBP06746 335 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 C6orf222P0C671 652 aaPredicted RBP16.4■□□□□ 0.22
GNE-202ENST00000396594 TRIM49P0CI25 452 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 TRIM49CP0CI26 452 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 INPP5AQ14642 412 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 ANO5Q75V66 913 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 RIC8BQ9NVN3 520 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 GTSE1Q9NYZ3 720 aa16.4■□□□□ 0.22
GNE-202ENST00000396594 LOC102724159A0A0B4J2E5 919 aa16.39■□□□□ 0.22
GNE-202ENST00000396594 CES2O00748 559 aa16.39■□□□□ 0.22
GNE-202ENST00000396594 PWP2Q15269 919 aaKnown RBP16.39■□□□□ 0.22
GNE-202ENST00000396594 RASIP1Q5U651 963 aa16.39■□□□□ 0.22
GNE-202ENST00000396594 ACAD10Q6JQN1 1059 aa16.39■□□□□ 0.22
GNE-202ENST00000396594 ZBED8Q8IZ13 594 aa16.39■□□□□ 0.22
GNE-202ENST00000396594 TAB3Q8N5C8 712 aaPredicted RBP16.39■□□□□ 0.22
GNE-202ENST00000396594 EGFL8Q99944 293 aa16.39■□□□□ 0.22
GNE-202ENST00000396594 ITGA11Q9UKX5 1188 aa16.39■□□□□ 0.22
GNE-202ENST00000396594 HOXA10P31260 410 aaPredicted RBP16.39■□□□□ 0.21
GNE-202ENST00000396594 NFE2Q16621 373 aaPredicted RBP16.39■□□□□ 0.21
GNE-202ENST00000396594 KBTBD12Q3ZCT8 623 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 SEPT8Q92599 483 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 BTBD6Q96KE9 485 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 TBK1Q9UHD2 729 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 C3P01024 1663 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 FAM196BA6NMK8 535 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 LIG3P49916 1009 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 GALCP54803 685 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 LZICQ8WZA0 190 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 PBXIP1Q96AQ6 731 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 OLA1Q9NTK5 396 aaKnown RBP16.39■□□□□ 0.21
GNE-202ENST00000396594 AAR2Q9Y312 384 aaKnown RBP16.39■□□□□ 0.21
GNE-202ENST00000396594 COL5A2P05997 1499 aaPredicted RBP16.39■□□□□ 0.21
GNE-202ENST00000396594 SUPT3HO75486 399 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 CREMQ03060 361 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 PATL1Q86TB9 770 aaKnown RBP16.39■□□□□ 0.21
GNE-202ENST00000396594 SLC35G2Q8TBE7 412 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 SRPK1Q96SB4 655 aaKnown RBP16.39■□□□□ 0.21
GNE-202ENST00000396594 RTFDC1Q9BY42 306 aaPredicted RBP16.39■□□□□ 0.21
GNE-202ENST00000396594 AGXT2Q9BYV1 514 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 DRG1Q9Y295 367 aaKnown RBP16.39■□□□□ 0.21
GNE-202ENST00000396594 ADGRB2O60241 1585 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 A0A0G2JLW4 131 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 DCDC2CA8MYV0 355 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms